ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX028592 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◣ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BCR
AADACL4
ZNF572
C1orf167
TATDN2
SUMO3
GORASP2
KRBA1
IL36A
IRAK2
THEM4
FAM184A
YY1AP1
DAP3
YPEL3
TBX6
TMEM89
COL18A1
AQP10
UBE2F
ZNF263
GSTM5
ZNF562
PRRT1B
EXTL2
KCNJ15
MON2
IGFALS
ENG
BAAT
RBPJ
TXNRD2
MROH7
SNCG
MMRN2
MAP1LC3B2
SLC27A5
S100A5
S100A4
S100A3
BCL7B
LEP
ESR2
MBOAT4
PPIG
OR4K17
RBM33
GPRC5C
CEP85
SLC1A7
APOL4
ZNFX1
ARHGAP39
ZNF426
TNXB
C4B
C4B_2
BSDC1
DLK2
FEM1C
GCNT7
FAM209A
ADCY10
TMEM44
RABGAP1
SARS2
MRPS12
AFAP1L1
LONRF2
TRIM32
ASTN2
ZNF623
EFCAB10
LZTR1
DEGS2
NOS3
CATSPERE
ZNF32
IL21R
FAAH
PRSS38
TMEM62
ST6GALNAC1
ZNF761
CYP17A1
H4C8
CCDC130
ZSCAN31
ADI1
AUH
SPATA45
CTAG1B
CTAG1A
TOP3B
POM121L2
CATIP
HSD17B6
MTRNR2L8
APOBEC3B
LOC110384692
C4A
SCCPDH
ZNF317
EHHADH
SEL1L
CFAP43
HERPUD2
LRRC61
ACTR3C
ZFP69
MTRNR2L2
MSH3
DHFR
ACAA2
GUCA1B
TDP2
ACOT13
IFT88
ATXN2L
MATK
TRANK1
WDR74
POLE4
LCN8
FRG2C
SMCO1
FRG2
FAM153B
ITGB3BP
EFCAB7
PDE11A
DUX4
GTPBP6
ANP32D
COL23A1
APOA1
C2orf88
CFHR4
SULT1C3
TLR2
LMLN2
BCAR3
ZNF324B
TMEM229B
ZNF117
CNOT3
ST20-MTHFS
NUF2
RBBP5
MTF2
RAB37
C19orf18
YWHAQ
CALCB
CBX1
RABGAP1L
NARF
GBA
CAT
MAPRE2
FAM227B
DTWD1
RPS7
DUSP6
MTRNR2L1
DMAP1
ZFP30
SAMD4B
AURKAIP1
C1GALT1C1L
SF3A3
ACYP2
CYBC1
SSBP1
SUPT6H
SDF2
PAXBP1
SDR42E1
COX16
RFC1
SMIM31
DBNDD2
FBXO31
JMJD1C
PDCD7
MAD1L1
TBC1D19
MMACHC
CCDC163
SELENOH
GALNT1
RPS29
PNPLA7
FASTKD1
DCP1A
FRA10AC1
TRIP4
SLC2A7
SATB1
C16orf54
PEX3
ADAT2
RPL27
RPL11
REM1
DEFB124
HTR5A
TMX2
MED19
SEM1
COMMD2
NFE2L3
MED23
TMEM242
RBBP9
ZNF577
C3orf14
GPD1L
TTC32
DNAJC25-GNG10
DNAJC25
MSRA
DSTYK
ACOX3
NPAS4
LUC7L2
TMEM14C
RNASET2
FMC1-LUC7L2
FMC1
TTLL12
OAZ3
SUPT7L
SLC4A1AP
SLC24A1
INTS14
THOC5
TATDN3
NSL1
ACTL8
TRMT44
CALD1
LSS
ZNF566
SLC38A9
EIF2D
PIN4
ZMPSTE24
YJU2
INTS12
GSTCD
NME1-NME2
NME1
SLC33A1
CLTB
NDUFS7
CANT1
TACO1
KDM3A
TEX50
STX18
COLEC11
LARP1
RPL37
POLR3B
CALCRL
LSG1
CADM2
MNAT1
TEFM
REEP3
GTF2H2C_2
DUSP16
FABP6
ATP9B
DLAT
TMEM41A
DRG2
STC1
RPS14
GTF3C3
HMGB1
RMDN2
NEMF
CASP10
DNAJB12
UTP3
ZNF829
ZNF568
CCDC59
RTCA
DHRS2
SERHL2
SRSF7
RTTN
ACSM2B
PPIP5K2
GIN1
GTF2H4
ALG10B
GTF2H2
STX16
ST6GALNAC6
PAFAH2
KDM1A
ATP5MC2
TMBIM4
WDR11
CASP4
SKP2
LMBRD2
TFPT
PRPF31
PIK3R1
AP3S2
REXO4
ADAMTS13
SAR1B
INTS5
GTF2H2C
TFPI
VTA1
NMBR
GTF2A1L
ZNF792
TMEM68
TGS1
USPL1
GABPB2
RAD54L2
PSEN1
MAMDC2
MOB4
MTR
PRDX3
DEK
CLEC12A
DPY19L4
KANSL3
FER1L5
RERE
CD14
SLC25A51
STAT3
TEX46
NME4
WDR36
CLK4
ATF7IP
MRPL44
NDUFB3
FAM126B
NCOA7
GCNT1
DISP1
ILF2
IPO4
INPP5F
PUM1
BANP
EIF3F
TBCK
AIMP1
TOR1AIP2
TOR1AIP1
VN1R4
TTC26
KMT2A
POLR2J3
TRMT5
SLC38A6
SAMD4A
KIF2C
ZNF408
ARHGAP1
STK19
DXO
FGD3
DCAF10
PPP1R3B
SLC44A1
TULP4
SPAAR
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
TIGD2
MITD1
MRPS31
TTI2
CDK5RAP1
CCDC97
PPP6R1
INO80C
RCAN1
EPRS1
RAB30
ZNF391
KLHL41
TMEM43
CHCHD4
CLDN4
MTIF2
PARP15
SLTM
BAIAP2
SNAP47
LMBR1L
JMJD4
OR8B3
TAAR9
CEP72
CDYL
ARRDC2
OR1E3
MRPL21
IGHMBP2
RNF217
BNIP1
TSEN15
SLC35G5
PSMF1
SLC41A3
NR1H3
ACP2
TMEM202
MRPS18C
HELQ
COX7A2
POLR2J2
CCNC
TBL1X
RGPD2
RGPD1
THAP6
OPA1
S100A9
CCDC150
SNRPB
TMEM79
SMG5
LBR
BMS1
DNAJB13
NSA2
GFM2
SLC45A4
PRKAG2
GLIPR1L2
C8orf37
MRPL48
UBE4B
SMG8
COPS7B
NSFL1C
ATR
NUDT9
SCGB1C1
RTP3
LRIG2
USHBP1
ZNF841
C18orf21
NBPF1
REN
H4C11
ZNF134
FAM133B
NUP54
KLRD1
MRPL1
BRF2
PDCD6IP
GALK2
H4C12
EIF1AD
BANF1
CCDC83
CELF2
EML2
ANK1
OR2AP1
DGKQ
USP30
IQCF2
XKR7
PRIM2
OPRL1
LKAAEAR1
ZNF554
CD200R1L
IQSEC3
IQGAP2
ZNF383
AKAP10
AARS2
ADNP
ZNF292
ZNF772
TTC5
SNIP1
DNALI1
FRG1
TRUB2
COQ4
PES1
MTBP
MRPL13
MTOR
CCDC88A
ATP1A1
MS4A1
CYP4X1
TMOD1
MRPS23
GSTA4
FGF1
RNF187
RAB6D
EPB41
COPS4
SCMH1
IL36RN
IL36B
ZSCAN25
N4BP2L2
SF3B6
FAM228B
SGCE
PEG10
KLHL20
HACL1
BTD
RUVBL1
GINS1
ARID1A
OR6J1
COX8C
PRSS41
ZNF280D
TSFM
HYOU1
TTC23L
TUT1
FANCI
ANXA3
GTPBP3
ANO8
PDRG1
PLEKHM3
GTF3C5
TTLL1
ZNF165
IAH1
CDC73
SCNM1
LYSMD1
DUS1L
CEP85L
ZSCAN22
PHB
DDX18
TMED1
ZNF582
GLO1
ALKBH3
SLC35A3
GAS2L3
LSM5
NAT8
FBXO38
DHX16
NOP16
HIGD2A
ALDH7A1
SMU1
TMA16
NECAP2
FAM98B
COA6
RPL5
SNX17
EIF2B4
CLUL1
RBM45
TMEM222
TGFBR2
DRAP1
C11orf68
SH3BP5L
POLDIP3
RMND1
ARMT1
FAM160B1
ALG14
LRP6
ASPSCR1
WDR55
PUS10
PEX13
FGFBP3
CLTC
ZNF385A
VPS13B
AVL9
ZNF561
LOC102724265
PDE6D
ZSCAN30
CPPED1
ALG10
SCAND1
MACC1
MRAP2
PDE7B
SUGCT
MPLKIP
EIF3E
SMARCD2
SERPINB1
HSPE1-MOB4
HSPE1
HSPD1
HEATR4
LRTM2
C17orf75
HEATR1
SNRPD1
THOC2
R3HCC1
ZBTB45
PIH1D2
NKAPD1
SMIM13
DHTKD1
CD248
DPP9
C10orf88
ERBB3
DDX1
CCNI
PRKAR1A
CENPV
ZNF677
VN1R2
SDHAF3
C5orf34
RNF125
HYAL1
GRPEL2
FBXL12
CTAGE8
CTAGE4
RNF6
GASK1A
ARID3B
POLR3E
ZNF670
SMG7
SREK1IP1
CWC27
TTC4
HDAC2
COPS2
RPS15
PRPF18
SEC13
ZNF501
GPAM
ISY1-RAB43
ISY1
NUP107
TMEM101
LGR5
HAX1
TPK1
RPS3A
CRYAA2
CRYAA
CEP120
SPARCL1
TMEM259
CCDC149
CCR6
ITFG2
WBP1
INO80B
PTDSS2
SLC35E2A
ZMYND8
ATG4C
MRPS14
SLC35B1
CCSER2
ABCC10
PHIP
APRT
SOD2
CRKL
CLASP2
TTC38
PKDREJ
TARS3
MRPL3
MAN2C1
GNAL
DCLRE1B
AP4B1
SRRM3
HUS1
ABCB10
MED18
ANO9
PFKM
SNRPB2
METTL9
ZNF609
METTL8
DCAF17
PCP4L1
MMEL1
CRH
MTHFD2L
HIP1
CCDC107
ABCG1
NFIB
AIG1
TPM3
CNN2
ERICH3
SESN1
CCAR2
C8orf58
TCTN3
FLT3LG
B4GALT7
NRBP2
ZNF518A
RPL7A
MED22
ARHGAP19
PRKAB1
SRP9
CREM
CCDC174
EEA1
AASDH
TIAM1
NOL12
ZNF512B
CCNY
ZNF546
SLC35G3
NDUFS3
KBTBD4
SCGB1C2
PTGES2
CLUAP1
ZNRF4
CUL5
PRELID3B
FOXN1
DNAJC24
DCDC1
MAST4
ARMH3
IRF9
TPM4
PDGFD
ERCC6L2
ZFP42
NBN
CERS5
SYN3
MLEC
LARS2
TSPAN10
NPLOC4
CHD1L
CCDC115
ORC4
MBD5
KRR1
PACSIN2
CASC3
CTAGE9
ATP10D
PHC2
LIPA
CHMP7
ZNF699
NDUFA4
TPR
ODR4
MRTFA
ZBTB40
PIP4P2
DNAJC6
ELAVL3
UBOX5
FASTKD5
VIRMA
PLSCR4
B4GALNT2
CASS4
SEC22B
RABGGTA
ARHGEF12
STOML2
CDIPT
RIF1
MEMO1
SMIM12
SEC23B
POLG
NDUFC2-KCTD14
NDUFC2
HLA-E
ZNF770
PLCL2
TMEM70
ELOC
ZCCHC4
MAPK1IP1L
KNL1
TIGD1
RPS26
EIF4E2
ZNF441
LPIN1
FAM13A
ZNF76
TMEM132A
RPS20
C16orf90
RNASE10
MSL2
GADD45A
SIVA1
NMNAT1
LZIC
RRP15
MRPS33
GARS1
FAM13B
TMBIM6
GATAD1
FAM25E
FAM234A
POLM
DCT
TRAF6
RAG1
MPHOSPH8
ATP5MC3
ZNF571
ZNF557
ZNF540
ABCA3
PSMD3
ZMYM5
CEP57L1
TMEM107
KSR1
CGGBP1
NNT
ADRM1
CBWD5
PDE4C
SPRR2F
UIMC1
RAB18
TAF13
KRTAP10-8
CFAP20
TTC21B
GFI1B
MRPL39
SURF2
SURF1
TRIM5
CTNNB1
CCDC200
KMT2D
PRKAB2
HNRNPL
FUT3
BCKDK
QRICH1
GTF3C2
RBM5
MRPS36
CNOT11
RTN4
ANKRD40
PTPN12
NDUFAF1
TRMT61B
ANKRD54
STK32C
POLN
HAUS3
DNAJC11
RAD52
DDX41
DPH2
POLR1F
TNFRSF1B
SNRPE
NUP205
MRPL42
COG2
KAT6A
FUT10
UGCG
TIMM22
ASF1A
NSUN7
WTAP
CNGA1
FAM207A
GOLGA6L7
RPL38
MAGOH
NFAT5
AQP2
S100Z
EIF2B3
ADPRS
WWTR1
SGMS2
RANBP9
DDX46
BDH1
SNRPD3
GUCD1
MRPL16
TMEM208
LRRC29
ZKSCAN2
PIGZ
ANK3
SPSB1
SLC39A3
PPP1R11
OTUD7A
AMD1
PTGS1
THG1L
RPTOR
GLIPR1L1
CAPS2
SUGT1
NCBP3
CCNT1
AHCYL1
DNAJB2
C11orf49
SACM1L
RRN3
HTR4
CARD8
EIF3L
TANGO2
SLC30A6
TNPO3
TOMM20L
RAB5IF
C11orf86
SMAP2
KCNH1
PRMT5
YTHDC2
PSMB2
ZNF438
BRWD1
CUL2
ZNF114
PPIL3
NIF3L1
ATXN7L2
THAP11
NUTF2
CBWD3
C2CD5
AAR2
SLC25A18
FBXW7
PRSS22
PIKFYVE
TRDMT1
ZNF3
TXLNB
SENP1
RANBP1
PPRC1
CRLF3
MRPL34