ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX028592 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◣ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

YPEL3
ZNF263
ZNF562
KCNJ15
BAAT
S100A4
PPIG
CEP85
ARHGAP39
ZNF426
BSDC1
DLK2
FEM1C
RABGAP1
ZNF623
NOS3
FAAH
CCDC130
ZSCAN31
TOP3B
MTRNR2L8
MTRNR2L2
WDR74
POLE4
ITGB3BP
EFCAB7
PDE11A
ZNF117
NUF2
RBBP5
MTF2
RAB37
YWHAQ
CBX1
GBA
RABGAP1L
CAT
MAPRE2
RPS7
DUSP6
DMAP1
ZFP30
SAMD4B
AURKAIP1
SF3A3
SSBP1
COX16
JMJD1C
TBC1D19
SELENOH
FRA10AC1
RPS29
TRIP4
PAXBP1
PEX3
ADAT2
RPL27
HTR5A
COMMD2
MED23
TMEM242
C3orf14
DEFB124
TTC32
DNAJC25-GNG10
DNAJC25
DSTYK
ACOX3
NPAS4
LUC7L2
FMC1-LUC7L2
SUPT7L
SLC4A1AP
SLC24A1
INTS14
RBBP9
TTLL12
TRMT44
DCP1A
EIF2D
ZMPSTE24
INTS12
GSTCD
NME1-NME2
NME1
SLC33A1
CLTB
NDUFS7
TACO1
STX18
RPL37
POLR3B
CALCRL
LSG1
MNAT1
TEFM
REEP3
GTF2H2C_2
TMEM41A
DRG2
STC1
RPS14
GTF3C3
HMGB1
KDM3A
NEMF
DNAJB12
UTP3
ZNF829
ZNF568
CCDC59
ACYP2
RTTN
PPIP5K2
GIN1
GTF2H4
ALG10B
GTF2H2
STX16
PAFAH2
ATP5MC2
WDR11
SKP2
LMBRD2
TFPT
PRPF31
AP3S2
REXO4
SAR1B
INTS5
GTF2H2C
VTA1
NMBR
USPL1
GABPB2
RAD54L2
MOB4
MTR
DPY19L4
KANSL3
RERE
SLC25A51
STAT3
KDM1A
FMC1
ATF7IP
MRPL44
NDUFB3
FAM126B
ILF2
IPO4
PUM1
DISP1
EIF3F
TOR1AIP1
TTC26
TRMT5
SLC38A6
ZNF408
ARHGAP1
DCAF10
NCOA7
SLC44A1
CFAP298-TCP10L
CFAP298
MRPL40
HIRA
MRPS31
TTI2
CDK5RAP1
PPP6R1
INO80C
RCAN1
TATDN3
NSL1
EPRS1
RAB30
ZNF391
MTIF2
POLR2J3
SLTM
SNAP47
JMJD4
CEP72
FAM227B
DTWD1
MRPL21
IGHMBP2
MITD1
TSEN15
PSMF1
NR1H3
ACP2
WDR36
MRPS18C
HELQ
COX7A2
CCNC
TBL1X
CCDC97
KMT2A
OPA1
TMEM43
CHCHD4
SNRPB
SMG5
BMS1
NSA2
GFM2
GLIPR1L2
C8orf37
MRPL48
SMG8
RGPD1
COPS7B
ATR
NBPF1
FAM133B
NUP54
MRPL1
BRF2
TDP2
ACOT13
PDCD6IP
GALK2
EIF1AD
BANF1
USP30
XKR7
IQSEC3
AKAP10
AARS2
BNIP1
SNIP1
FRG1
TRUB2
COQ4
CLK4
MTBP
MRPL13
CCDC88A
GSTA4
RNF187
COPS4
ZSCAN25
N4BP2L2
SF3B6
FAM228B
ZNF292
KLHL20
BTD
RUVBL1
ZNF280D
TSFM
TUT1
GTPBP3
PLEKHM3
CDC73
SCNM1
LYSMD1
FABP6
DUS1L
CEP85L
DDX18
ATP1A1
TMED1
ALKBH3
NSFL1C
SLC35A3
RGPD2
LSM5
DHX16
NOP16
HIGD2A
SMU1
TMA16
NECAP2
FAM98B
COA6
RPL5
SNX17
EIF2B4
RBM45
TMEM222
ZSCAN22
TTLL1
TGFBR2
POLDIP3
MRPS23
FAM160B1
ALG14
LRP6
WDR55
PUS10
PEX13
FGFBP3
CLTC
VPS13B
ZNF561
LOC102724265
ZSCAN30
CPPED1
ALG10
SCAND1
PDE7B
SUGCT
MPLKIP
EIF3E
HSPE1-MOB4
HSPE1
HSPD1
C17orf75
HEATR1
SNRPD1
R3HCC1
PIH1D2
NKAPD1
SMIM13
GTF3C5
DRAP1
DHTKD1
C11orf68
ACTL8
FGD3
DPP9
C10orf88
DDX1
CCNI
CENPV
SDHAF3
GRPEL2
RNF6
SREK1IP1
CWC27
ZBTB45
TTC4
HDAC2
COPS2
RPS15
PRPF18
SEC13
ISY1-RAB43
ISY1
NUP107
TMEM101
HAX1
TPK1
RPS3A
CEP120
TMEM259
ANK1
ITFG2
INO80B
ATG4C
SMARCD2
MRPS14
SLC35B1
PHIP
SOD2
CYP17A1
CRKL
CLASP2
TARS3
MRPL3
MAN2C1
GNAL
DCLRE1B
AP4B1
HUS1
MED18
APRT
SNRPB2
METTL9
BCAR3
SMG7
CCDC107
ABCG1
SESN1
B4GALT7
SRP9
AASDH
NOL12
RNF125
NDUFS3
KBTBD4
ZNF165
CUL5
PRELID3B
DNAJC24
DCDC1
IRF9
PDGFD
ERCC6L2
POLR3E
PES1
NBN
LARS2
TSPAN10
NPLOC4
CHD1L
ORC4
MBD5
KRR1
CASC3
SERPINB1
CHMP7
NDUFA4
TPR
ODR4
ZBTB40
PIP4P2
DNAJC6
UBOX5
FASTKD5
VIRMA
CASS4
SEC22B
RABGGTA
C18orf21
STOML2
CDIPT
RIF1
MEMO1
SEC23B
SLC45A4
POLG
THOC5
HLA-E
ZNF770
ZCCHC4
MTOR
MAPK1IP1L
TIGD1
RPS26
EIF4E2
FAM13A
ZNF76
TMEM132A
RPS20
CLUAP1
NMNAT1
LZIC
MRPS33
GARS1
TMBIM6
FAM25E
FAM234A
POLM
DCT
CCAR2
TRAF6
RAG1
ATP5MC3
ZNF571
ZNF540
ABCA3
PSMD3
ZMYM5
CCDC150
CEP57L1
CGGBP1
ADRM1
CBWD5
ATP10D
UIMC1
RAB18
SRRM3
CFAP20
MRPL39
CTNNB1
PRKAB2
RMND1
ARMT1
FUT3
TMEM68
TGS1
ANKRD40
NDUFAF1
MMACHC
CCDC163
BANP
TRMT61B
ANKRD54
DNAJC11
DDX41
KMT2D
POLR1F
CCDC174
SNRPE
MRPL42
COG2
FUT10
WTAP
QRICH1
FAM207A
RPL38
MAGOH
NDUFC2-KCTD14
NDUFC2
EIF2B3
ADPRS
DDX46
SNRPD3
GUCD1
MRPL16
ZNF609
TMEM208
LRRC29
ZKSCAN2
SLC39A3
OTUD7A
THG1L
RPTOR
GPAM
SUGT1
NCBP3
AHCYL1
C11orf49
SACM1L
RRN3
SLC30A6
VN1R2
TNPO3
TOMM20L
KCNH1
THOC2
PRMT5
KNL1
YTHDC2
PSMB2
RAD52
EEA1
ZNF114
PPIL3
NIF3L1
ATXN7L2
CBWD3
C2CD5
AAR2
ZNF518A
PIKFYVE
ZNF3
SENP1
PFKM
GFI1B
PPRC1
EPHA3
SFSWAP
CRBN
TIPARP
PRPSAP1
GORASP2
MAN2A1
CRLF3
CREM
RWDD1
MIER1
SLC39A13
PPIH
PET117
KAT14
PNPO
PLCH1
PTPN4
DHRS13
TMBIM1
MAST2
INTS2
EFHD1
TRAM1
OSGEPL1
CDK19
CYB561D1
PPP1R11
AMD1
HNRNPA1L2
CYB5R4
SET
RHOT2
LRRC59
ARMH3
U2SURP
EIF4E
MRPS15
MEGF8
PPOX
CDK12
FBXO22
ZNF791
ZNF490
CLUL1
C3orf38
ATG101
ACBD4
SMIM12
CAMK1D
TVP23B
EPS8
ZNF383
SLC25A53
LTN1
RSAD1
DQX1
PARP2
PLK3
AGK
STAU1
ZSCAN12
TRMT2A
RANBP1
UCHL3
COMMD6
PSMA1
ATAD2
WDPCP
RAB5IF
MDH1
GEMIN5
ZNHIT6
BORCS7
INKA2
DDX20
AP1G1
WDFY1
WARS2
WDR43
GABPA
ATP5PF
DPYD
DPP8
TMEM167B
CD47
C12orf73
ARL14EP
STAT6
EIF4A2
RRP15
CIZ1
FBXW7
NOTCH2NLC
COMMD4
PDE4C
PPP2R5B
PARK7
DYRK4
ATG5
PHF21A
UFD1
CDC45
THAP10
MED4
MDC1
LRRC49
H4C8
TYSND1
IFTAP
RPS19
PSMD11
ANKRD36
ZDHHC6
VTI1A
TTC14
GOT2
ZNF331
SECISBP2L
COIL
LTA4H
MFSD8
ABHD18
PRMT3
TRMO
CHCHD6
ZNF226
WDR70
STXBP3
YBEY
PSMD6
MCM3AP
CCNL1
TOMM20
OGT
ADNP
SPEF2
PCBP2
NEK7
CSTF2T
ITGA4
ZNF846
SPG11
UCHL5
RO60
NUTF2
CENPT
KDM3B
GDAP1
PLS1
TAS2R4
EIF2S1
ATP6V1D
PIAS3
RBM28
NFAT5
DCP1B
ZNF605
MRPL58
ACBD6
RPA2
ZNF461
CLPTM1
NEK4
NFE2L2
DHX8
SRFBP1
IPO13
RANBP2
KDM5C
RBL1
ZNF570
ZNF569
WWOX
TRDMT1
NUDT15
SIRT4
SFT2D3
CSDE1
ALDH9A1
GNB2
RARS1
GCFC2
TMEM30A
TIGD6
HMGXB3
MLEC
ZNF527
KAT6A
NEUROD4
KIAA1586
HES3
RETSAT
MEX3C
ZCWPW2
AZI2
TINF2
MKRN2
ZER1
TRAPPC8
HECTD1
EIF5B
COL4A6
COL4A5
MTRES1
SLCO1B3
PRAME
YWHAB
RAB23
GTF2B
ZC3HC1
RAD51AP1
C12orf4
ZNF585A
ELOVL2
ZCCHC8
FOXJ3
VPS35L
VPS72
GPN3
FAM216A
CPLX2
CNTRL
SLC39A6
NME2
SCP2
YJU2
NAA20
ZNF350
ZNF286A
SMAP2
CAPS2
VAMP4
C19orf48
PRUNE2
FKBP5
ZNF670
POC1B-GALNT4
FNTB
UGCG
BCKDHB
HDAC8
POMP
VPS13D
NGDN
ANKRD46
PIGC
PIGBOS1
PIGB
NMRAL1
HMOX2
YAP1
NCKAP1L
RFXANK
BORCS8
ZNF26
RBIS
NSMCE4A
GOSR1
UBE3B
CDC5L
ANTKMT
RFX7
UFC1
AP3B1
NR1H2
PPA2
EXOC2
RPL6
DNAJB4
RNF207
CYP51A1
ADAM22
ASNS
TTC21B
CELF1
RFFL
ZZZ3
TRMT11
RTN1
NOTCH2NLA
RALBP1
MGST3
RBSN
SMARCD1
UGGT1
TPM1
HEMK1
MCOLN1
FKBP8
MARCHF2
EVI5
POLR1H
YTHDF2
SPAG9
AQR
PRRG2
NOSIP
UBE2L3
TM2D1
R3HDM2
CSTF1
AURKA
TRPM3
HIF1AN
GTPBP10
ZNF25
RPS13
GMPS
DDX27
CYREN
PTPRCAP
CCDC124
CAMK2G
CALM2
MTMR6
FAM83D
METTL26
OAZ3
MRPL9
ZNF212
RPL29
PPP6C
PIK3R1
RHOT1
RNF146
FER
ANGEL1
TMEM128
EDC4
ZNF354A
VPS52
RPS18
PGBD2
TMEM70
SH2B1
SLC2A4
N6AMT1
CBWD6
TXNDC9
SPECC1
BCL2L13
SNX19
CRB1
ANO8
TMEM170A
LURAP1
KIAA1549
HARS2
HARS1
AAAS
TRMT1
NOXA1
HNRNPD
TRPC4AP
EIF5A2
EEF1AKMT2
TMEM106B
ST6GAL1
PLCL2
DYNLRB2
ZBTB8OS
RBBP4
SYNPO2
RCAN2
TRIM5
PSMB7
TPD52L1
SCYL3
GEMIN7
FZD1
DLC1
DNAJC21
COX18
USO1
GCLM
TMEM248
SNX12
MRPL19
BRWD1
ZRANB2
SEC31A
SPATA5
NUDT6
VPS25
PSRC1
TAMM41
SLC26A4
CRNKL1
CFAP61
PPP1R8
LZTR1
TSC1
ZNF335
LIG4
DROSHA
C5orf22
ABLIM1
SNAPC5
GFM1
ADARB1
NSUN4
SMAD5
RBM25
NIP7
MAD1L1
COG8
NOL11
GSPT1
ZNF501
NLE1
TBPL1
DHRS7
SRSF11
RIMBP3C
RIMBP3B
LAMTOR5
ANKMY2
CWC25
TBC1D13
MOB1B
HIBCH
RNF220
PSMD9
HPD
TOMM22
DEDD
DAB1
HIBADH
PKD2L2
SLITRK5
PDE12
STK40
PLK1
SMIM8
OTUD7B
FGD4
CALM1
RPL26
KCTD5
CDKN2AIPNL
ADAR
PDHB
CCNG2
ATPAF1
ARL8B
M1AP
TBRG1
MICU2
COQ2
AMN1
SASS6
MARCHF7
DGKZ