ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RBM39 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◣ RBM39: Average

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ RBM39: STRING

H4C2
H3C2
H2AC4
H2BC12
H2AC12
CNOT3
H4C11
SNRPB2
H2BC11
H2AC11
FRG2
H4C12
MTRNR2L8
H4C15
H4C14
H3C12
H2BC17
H2AC17
PMF1-BGLAP
PMF1
SPATC1L
H2BC21
H2AC21
H2AC20
MTRNR2L2
MSH3
PRDX1
EXOC2
H1-2
TMEM242
MTRNR2L1
H2BC5
H1-4
NPAS4
RPS12
EIF1
POLR3E
WDR74
SRSF7
PEX3
ADAT2
STX16
FUS
EEF1A1
IQSEC3
MRPL44
MED23
UNK
H3-3B
H3C15
H3C14
H2AC19
H2AC18
SRSF2
MFSD11
POLDIP3
MAT2A
KANSL3
FER1L5
TOP3B
CTNNB1
NGB
PSMD3
DMAP1
RPS20
NXF1
CCNI
SRSF6
CALM2
RPL5
MTIF2
GTF2H2C
UBC
PRMT5
IPO4
CPPED1
GTF2H2
GTF2H2C_2
FAM53C
CDC25C
SLC9A1
RBSN
SRSF3
HSPA1B
H2BC8
H2AC8
ZBTB4
SLC35G6
POLR2A
RPSA
P4HA1
PALB2
DCTN5
ADARB1
MTF2
H3C4
H2BC7
H2AC7
AAR2
NME1-NME2
NME1
POLR2J3
DDX1
RPLP0
MBLAC1
CCDC200
JPT1
ATF4
MARCHF7
MTRNR2L9
H3C10
H2BC13
H2AC13
GTF2A1
PLEKHM3
CLTC
HSPA5
RPS15A
BRD2
INTS12
GSTCD
RGS5
PSMF1
NUF2
SLC39A3
RPS3
ZSCAN12
KDM8
DCAF10
METTL25
CCDC59
NABP1
CCDC88A
STX18
E2F6
ACTB
H2BC14
H2AC14
NOTCH2NLA
USP30
KMT2E
H4C3
H1-6
EIF2D
NOTCH2NLC
METTL9
PBLD
HNRNPH3
ZC3H6
H2AX
BMS1
MRPL39
OR2T1
ZNF76
HERPUD1
FRA10AC1
CENPU
HNRNPA2B1
CBX3
YARS1
S100PBP
RPS23
MRPS23
ATP6AP1L
MTHFD2
SLC24A1
INTS14
RBM39
PDE6D
COPS7B
RPS2
RNF151
TMEM167B
H4C5
IER5
SNRPB
FAM98B
NOTCH2
RPL23A
RAB34
HSP90AB1
TATDN3
SMARCD2
SCAND1
NSL1
H2BC15
H2AC15
ZCCHC4
WTAP
SOD2
RAF1
NDUFS7
RPLP1
RABGGTA
TACO1
EGR1
TUBA1B
ENOSF1
DHRS2
STAT3
ARL6IP1
NUP214
TMEM41A
ACYP2
PTPN6
NCOA7
C12orf57
SCGB1C2
H2BC4
H2AC6
CYCS
COL23A1
TAF1D
CBWD5
CBWD3
C11orf54
TCEA1
RBM28
CSKMT
C11orf98
KMT2D
NASP
PET117
KAT14
HNRNPAB
TBC1D19
SCFD1
MCL1
INO80C
PAXBP1
STX10
IER2
ATR
UBE2D3
TUBA1C
PCK2
NRL
MRPS15
CCNC
SF3A3
NOTCH2NLB
GSTA4
TMEM230
RPL37
EIF2B3
TNFRSF21
CCNL1
ZKSCAN8
FOS
RPL23
FRG2C
SLC30A6
RRP15
ZNF391
H3C13
H2BC18
MRPS31
ARL15
RIF1
C14orf93
TUBB4B
RPL12
PRAME
PDE11A
LRSAM1
DSTYK
GLUL
FAM133B
TTC4
MRPL58
SLC35C2
GDF15
SLC25A51
RPL10A
C6orf62
GTF2B
KIF16B
TRA2B
RPS19BP1
GTF2IRD2B
NBPF1
CRKL
H2BS1
AARS2
MAN2C1
GBA
ALKBH3
MRPS33
DCLRE1B
AP4B1
ZSCAN30
PABPC1
METTL8
DCAF17
LRRC37A3
TEFM
C12orf73
SSBP1
SREK1IP1
CWC27
SNAPC5
PAFAH2
LUC7L2
GOSR2
CCDC125
THOC1
RPL19
MTMR2
HSPE1-MOB4
HSPE1
HSPD1
CCDC116
CACNB1
SRSF1
NBN
MARCKSL1
TMEM267
NDUFB10
CBWD6
SNX16
EIF4G2
HINT3
GTF3C3
NUBP1
KPNB1
DRG2
DPY19L4
POLR3B
ZNF609
VAMP4
HNRNPH1
EIF4B
EIF4A2
RPL32
NFE2L2
RPS16
NDUFC2-KCTD14
NDUFC2
AJUBA
SACM1L
PPP2CB
WDR11
VPS51
PRADC1
PARK7
EFHB
CCT7
C2CD5
STAM2
DDX5
CEBPE
STX6
SMIM12
SLC39A10
PHF19
MDP1
CHMP4A
PPIA
HMGA1
GDAP1
RFXANK
HEATR5A
BORCS8
SEC14L1
TRIM25
TCTE3
SECISBP2L
RWDD1
RPS8
ERMARD
VPS52
SFPQ
RPS18
B3GALT4
ZC3H10
RPL41
MANBAL
RPL37A
EIF4A3
C17orf75
ZC3H15
TTC26
RNF6
RBM45
PSMD14
MTERF1
MRPL40
HIRA
DTD2
TTI1
TMC4
RPRD1B
MYL12A
SCGB1C1
PUM1
NACA
AP3S2
UBE2S
TTPAL
TSC1
RPL15
NKIRAS1
GFI1B
RPL31
MRPL21
IGHMBP2
DIDO1
MRPL16
CCAR2
C8orf58
RTN4
ANKRD36C
MKRN3
ATF3
PCBP2
TRMT11
ITPR1
SYT7
ERCC6L2
TIGD1
PIGBOS1
PIGB
MRPL3
GTF2H4
EIF4E2
C1orf198
BRWD1
STMN3
RTEL1
LOC389831
LIPT1
ZFP64
SRCAP
LOC730183
DR1
CDK5RAP1
ZSCAN9
WDR36
TOB1
RPS7
POLG
OXA1L
NDUFS3
KBTBD4
SAR1B
FAN1
FAM227B
EFCAB7
DTWD1
SLC25A21
PPP4R3B
GTF2IRD2
XKR7
TSEN15
LZTR1
RGPD8
RGPD6
RGPD5
ATXN7L2
TRPC4AP
TPK1
TOR1AIP2
TOR1AIP1
AURKAIP1
THAP9
SEC31A
SCML1
NEU1
CITED2
YTHDF2
RPS3A
NANP
COMMD1
CCT4
ZNFX1
ZCCHC3
SPOCD1
PNP
CCDC115
ZKSCAN2
GINS3
DUX4
RPL3
E2F3
DUSP1
ARHGEF12
ASH1L
RAD54L
MYLIP
DDX18
RMDN2
U2SURP
NFYC
TMEM18
TFRC
SLC44A1
SLC16A1
ZCWPW1
TMEM222
TJP3
RBL1
PTCD1
PARP2
NR1H3
MEPCE
DDX19B
CPSF4
C6orf226
ACP2
AARS1
OAZ1
IARS1
ARID1A
ACBD6
ZMPSTE24
SLC12A5
NPM1
TANK
LRRC59
HNRNPC
GTPBP10
HTR5A
H2AC16
H1-5
LDHA
CSDE1
ZBTB41
VTA1
NMBR
DHRS4
CRB1
UBE2F
BNIP1
LOC102724951
LOC102724843
LOC102724219
DNAJA1
APTX
PCF11
RPS10-NUDT3
RPS10
HSPA6
FOXJ3
RUSF1
KLHDC10
VPS72
TRUB2
TOB2
TMEM101
NOMO2
COQ4
ANKRD36B
ZSCAN31
ZNF843
ZNF337
SMARCE1
KIAA1586
HEXIM1
ZCCHC7
RPL11
RFX7
HECTD1
VPS13B
SEC22B
RAP1GAP
GABPB1
BRF2
TMBIM4
MEMO1
CCDC90B
WASHC1
PSMD5
NECAP2
ADPRHL1
SREK1
SPHK2
SLC35B1
RPL18
PPP6R3
DDX3X
AFF1
ZNF384
TAF15
REXO5
PPIH
ERI2
DHRS4L2
BECN1
PIGC
KDM3A
DARS1
ASXL1
THADA
SLC1A5
OLA1
INO80D
EIF2S2
BTG1
AGBL3
RPL7A
MED22
SNX5
MGME1
FMC1-LUC7L2
FMC1
UBE2Q2L
SEC13
MOB4
ANKRD46
UBE2L3
RPL38
RAB37
MRPL48
CHEK1
UBOX5
PPP6R1
METAP1D
FASTKD5
C19orf48
UGP2
TSTD3
SIRT5
LRIF1
GMNN
FUT10
CHD2
ANKRD36
CTR9
RPL27
RCOR3
PVRIG
EDC4
PUS10
PLK1
PEX13
MMADHC
FOSL1
CHGB
BIRC6
WBP1
TMEM238
TMA16
RPL28
INO80B
FBXW2
CIRBP
RREB1
ALG1
UCKL1
SUGCT
MPLKIP
PSMA6
PIP4K2B
HUS1
SON
NET1
MAPK1
LTA4H
GCLC
GART
FTL
C2orf88
THUMPD1
ARL14EP
MIA2
CCDC97
ACVR1
XRN2
THUMPD3
SNAI1
MPHOSPH9
C12orf65
SLC33A1
NDE1
NCOA3
MARF1
IMMP2L
NOMO3
EIF1AD
CHMP7
CCN2
BANF1
AHCY
EEF2K
ZNF518A
PRORP
PPP2R3C
PPP1R10
PDRG1
MRPS18B
ITFG2
GORASP2
TANGO6
REV3L
DCP1A
AP1G2
THAP7
SRSF11
PRMT3
PPP1R3E
CRBN
BCL2L2-PABPN1
BCL2L2
SKP1
RPS27
INTS6
BCAR3
RPS6
RPL9
PSMC5
LIAS
HAUS4
FTSJ3
CCNG2
RBBP5
PPIL2
JUNB
CLK1
ATXN2L
ZNF219
TUBGCP3
TMEM253
NFKBIL1
GPN3
FAM216A
DDX39B
ATP6V1G2
ZNF385A
VPS16
TPR
SURF6
SNRNP35
SLX4IP
PCED1A
ODR4
MKKS
HSPA9
GID8
C11orf49
APOM
BAG6
AMBRA1
SF3B3
PCTP
MPHOSPH10
MECOM
MCEE
COG4
ALG10
UNC45B
POLR2J
FER
CSNK2A1
ABT1
WWOX
TSFM
LTF
ACIN1
POLR3D
NUDT15
MED4
JRKL
H4C4
ELK4
DCAF11
CCDC82
ACTRT3
SHF
RBBP6
INTS2
FAM83D
CZIB
CKS2
ZNF184
IFRD1
STXBP3
SRSF10
RIOK1
PRR3
GNL1
DDAH2
CAGE1
ZC3HC1
SUPT3H
SND1
MRPL30
MITD1
MED15
MAGEF1
FZD1
DDX21
CENPC
UBFD1
TMEM107
TINF2
NCDN
KPNA2
KIAA0319L
EARS2
WDR31
TNPO1
TMEM209
SSMEM1
PPIL1
PARPBP
NUP37
ITPRID2
CSTF1
C6orf89
AURKA
SENP1
RPS26
POU2F1
PFKM
IRF9
CBWD1
SMG7
REXO4
RANBP9
ISOC2
AGK
ADAMTS13
RPN2
PTPN2
POMZP3
NCSTN
MROH8
COPA
AP1G1
ZNF771
TRDMT1
TBP
REPS1
PSMB1
PMPCB
MTG2
KIF15
KIAA1143
GPANK1
CFL2
C6orf47
YWHAE
STAT1
SDCBP
RGL2
CMTR2
CHMP3
TBC1D5
DHRS4L1
ATP5MC2
VWA8
PBK
OTUD7B
NPDC1
TSPOAP1
TMEM94
SEC23A
SLC36A1
PCIF1
NT5DC1
HSP90AA1
H2AZ1
GPR89A
DNAJB14
ZFHX2
THTPA
PPM1D
FAM234B
SSBP2
SLC38A2
SDHAF3
RTN4RL1
RBM34
DPH1
CYB5R4
COQ7
ZNF248
SRP9
SLC3A2
RDH14
PTP4A1
GTPBP6
RTL10
RSPH6A
PYROXD1
NUDCD3
MRPL35
IQUB
IMMT
GNB1L
AQR
TTC30B
RAD54L2
NCL
MTX2
EIF3C
CDC7
C14orf119
XRCC4
TMEM167A
SULT1A4
SULT1A3
SLX1B
SLX1A
RNF103-CHMP3
RMND5A
POLR2J2
PIKFYVE
MAP3K7CL
KANSL1
IMPDH2
HSPA1L
HSPA1A
CHD1
CCT8
BOLA2-SMG1P6
BOLA2B
BOLA2
FAM187A
EFTUD2
CCDC103
ZNF451
XPOT
SYS1
STAMBP
NXT1
GABPA
DPY30
CUL7
ATP5PF
VRK2
UTP4
USPL1
MRTO4
KAT7
ING3
HMGB1
EMC1
DERPC
CHTF8
CCT2
PRICKLE4
PHIP
PHF10
NOP56
MRPS14
FRS3
EXOSC6
SF3B6
RRN3
NAGK
ISOC1
HMGN4
FAM228B
RPS13
PELO
MFF
ITGA1
ID1
HMGB2
BRIX1
ZNF668
ZNF646
RBMXL1
PGBD1
KYAT3
HDAC4
TOX4
RAB2B
NANOS3
KAT6A
FBXO4
DDIT4
VARS2
TIMM17A
TAF3
SLC20A1
SELENOH
SDR39U1
H3C11
CASC3
ZSCAN25
SPDYC
PPIL4
POLR1B
GFOD2
CLUAP1
C16orf90
AGL
ADI1
TOMM5
TDP2
RALGAPA1
PKP4
MTHFD2L
LINC02210-CRHR1
IST1
H4C8
CCDC148
CBWD2