ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
MIA2
SEPTIN4
CRYBG2
ACSL5
LOC100509620
URGCP-MRPS24
URGCP
SKIV2L
NELFE
LENG8
CCDC107
PHF12
MTRNR2L8
NCS1
NR1I3
EPS8L2
DEAF1
NEK2
C2CD2L
MAMDC2
ATXN7L1
NDUFS1
EEF1B2
CDHR2
LTB4R
LTB4R2
CIDEB
CLCF1
C11orf86
CSTF1
AURKA
C19orf33
PCNX3
MAP3K11
HDGF
GPX4
CYP17A1
SLC20A1
CHST11
SLC27A5
SPAAR
HRCT1
SEC13
KDM6B
SPON1
SIAH2
PLXNB2
ERICH3
SLC9A3R1
MTRNR2L2
MSH3
DHFR
EXOC1
ABCC3
TIGD3
SLC41A2
SNTB2
RAPGEF1
RGS3
FCHO2
IRX4
CFL1
INAVA
SFRP5
S100A16
KPNA7
CAMK2G
FHL2
CREB3L3
KIAA2013
ANKRD66
SCARB1
ITGA3
TDP2
ACOT13
ERBB3
PLA2G2E
INTS4
CCDC90B
PEMT
RAB17
PTP4A1
B3GNT3
ROCK2
ACY1
SPG7
SYT12
POLD4
GNAL
LASP1
ZFP36
PLEKHG2
SERINC2
FUT5
ABHD12B
PRKCD
SMIM29
CDC14B
IL20RB
CITED2
KIF4B
TJP3
PEX11G
ZNF764
C19orf12
TOB2
ADRA1B
PCBP1
ERBB2
RCOR2
RBKS
BABAM2
ATP5F1D
MIDN
USP37
CNOT9
ENDOD1
ABLIM1
PLIN1
DYRK1A
ARHGAP27
C1QTNF1
DHRS3
INPP5J
BAAT
DNAJC25-GNG10
DNAJC25
SMAD3
OXCT2
ZC3H12D
PAX2
SH3D21
PIM3
TMEM214
MTFMT
TNFRSF10B
ACAA2
SLC38A10
SHTN1
PLK2
RAD50
ROMO1
TLCD4-RWDD3
TLCD4
TAB2
USP2
CA9
ARHGEF39
CD86
GUCA2A
ARNT
GPR171
KMT5A
UBE2R2
PPP1R12B
ZFAND3
TINAGL1
MBD3
MEAK7
DOCK5
SH3D19
PHOSPHO1
ALDH2
MAP4K5
ATL1
CENPVL2
CENPVL1
SMIM19
SLC20A2
SECTM1
TOGARAM1
KLHL28
NGRN
GAB1
MTRNR2L1
PTPRF
CEP152
ZNF219
SPTBN4
BLVRB
ZNF696
ALDH3A1
PRMT2
ERCC6L
GNB1
KRTAP5-7
RPS3A
RASSF5
KNL1
IST1
MYD88
ACAA1
RASSF2
STAP2
MPND
CCL20
EDEM1
MTMR4
RIPK4
RNF217
GOLGA4
GJB1
LHB
AFF1
SEC23A
CTSO
DENND5B
LBX2
C2CD2
TMEM171
TBC1D10A
PRDM10
ELL
SESTD1
SLC39A6
ELP2
TRIM55
TMEM169
PECR
NQO2
MLLT10
PLEKHG3
TTC31
CCDC142
DIS3L
MVP
METTL7B
SH2D5
C10orf90
PABPN1
MPI
SDC1
ALDH3A2
IGF2BP3
IQGAP2
RARA
ZSWIM7
TTC19
PPP1R27
MCRIP1
PLCXD2
OCIAD2
CORO1C
PCYT1A
SH3BP5L
PHETA1
FBXO46
ZNF564
SPINT2
RGPD2
RGPD1
RBP2
SELENOP
PRUNE1
MINDY1
TRIM2
CREBRF
VGLL4
MGST2
SF1
UBTF
SGO1
TACR2
TRIM48
MIA3
PRAP1
GSTM5
BIRC2
SLC19A3
IGSF23
PDE11A
NRCAM
WDR27
C6orf120
CERS2
IQCN
MYOG
VTN
SARM1
PDGFB
ARPIN-AP3S2
ARPIN
CHCHD2
MAFG
PIKFYVE
MRPS11
MRPL46
NR6A1
SCAF11
KDM4B
COPZ1
DENND1B
RCOR1
SLC7A5
BORCS7
PLAAT3
PRR7
PNPLA1
KRT86
MLF2
LAMP3
LIPK
ATG16L1
ADI1
METTL27
SHISA5
TRMT11
TRAPPC4
RPS25
DBP
MIIP
DOT1L
DCLK1
SRSF11
LRRC40
MTRNR2L9
PRR3
GNL1
MTMR11
HOXA3
BEND7
NEDD4L
NR1D1
ARHGDIA
MMACHC
MBLAC1
NUDCD1
BAZ1B
IFRD1
PYY
NAGS
DHRS7B
RPL23A
RAB34
RBIS
SF3A2
PLEKHJ1
SHPK
CTNS
AHCY
GPR137
CLASP1
FAM185A
C11orf24
PLEC
CD2BP2
CPLX2
MBNL2
GFM1
CTSE
TDRD1
CCDC186
OAF
FAM3C
KLF6
TIRAP
ANO1
EPS8L3
APOA1
MOV10L1
POLRMT
UNK
H3-3B
RFFL
PLAA
IFT74
HERC5
DNAJC22
IL32
APBA2
EEPD1
VWA7
MXD3
SPTBN1
TTI2
EMP1
AHSP
KLRC3
COPS4
TMEM120A
SPDYE14
SPDYE10P
PTS
CRPPA
GNPDA1
ALDH3B1
MTFR2
PPM1D
SH3BGRL2
CDC42EP4
RAB43
MYBPH
DKK4
MFAP4
SMARCA4
TMEM71
PHF20L1
ALDH4A1
CPHXL
IRF2BP2
PYCARD
GLTP
PDXP
NIBAN2
MSLN
FHDC1
SMYD5
GADD45A
LY75-CD302
LY75
IDH1
TRIM14
PPP1R9B
TBC1D23
C10orf105
SOD2
SLC25A28
PANK1
TEAD4
BLVRA
GLRX
TPD52
SMARCD2
CBY3
RCAN1
PACSIN2
NOSTRIN
PTPN23
TUBAL3
ARTN
PGLYRP2
CDK11B
CDK11A
TECTB
KRT8
APOL4
KRT18
ASAP2
ARHGAP32
CEBPG
ISL2
PEPD
PRSS8
PLXDC1
DKK1
ROM1
EML3
RABGGTB
PERP
TKFC
DDB1
C1orf174
INTS9
HMBOX1
UGDH
PYGL
AMN1
BLCAP
COQ5
ZC3H10
RPL41
SQSTM1
MGAT4B
FIGNL1
GPT
YARS1
S100PBP
TBP
PSMB1
POMGNT1
LURAP1
PDGFRL
PPP1R15B
IRAG1
IRAK2
NECTIN1
SLCO2B1
C2orf88
RPL34
ZDHHC8
TCTEX1D4
BTBD19
FAAP100
CSNK1A1
ASB2
GABARAPL1
TTC36
PNPLA2
PHC2
SFXN3
PDZD7
MSH5
CLIC1
ZNF512B
AFAP1
LOC389199
KRT19
HNMT
PPIP5K2
PTK7
CIDEC
ENTPD2
CDC6
TNFRSF1A
LRRC1
LSM1
BAG4
CDKN1A
HMOX1
CLRN3
CIBAR2
PITPNM1
ERICH4
DMAC2
LRP1
ETV4
HPS5
GTF2H1
SOS1
PRMT1
CMPK1
APOBEC1
CDC25A
MRPS30
SFR1
RPL13
HSPE1-MOB4
HSPE1
HSPD1
KIF21B
AGPAT1
RNF5
YAP1
TTI1
RPRD1B
ADGRB1
ARSA
PHACTR4
TBCA
CLK2
MRPL2
KLC4
BLOC1S5
SELENOI
ADGRF3
UFL1
PRKAR1A
PMVK
CNOT2
KLRC2
ARHGAP29
MYRF
INF2
U2SURP
ACSL1
HKDC1
LINS1
ASB7
IER5L
PARP4
C6orf132
NCSTN
COPA
NAE1
CHD9
RPS15
STN1
CLNS1A
JUND
EREG
HDHD5
CCND2
ANXA11
C19orf84
UBR4
SLC38A3
RUNDC3A
GCLC
TIMMDC1
NFIB
SLF1
KIAA0825
MAPK8
MLXIPL
WDR81
TMEM254
SEMA3B
AWAT1
ACOX2
PSPN
ALKBH7
GRAMD4
MICAL1
HPCAL1
CHMP4B
ABCC2
KIF16B
ZP3
ZNF326
TAGLN2
EGLN1
CAPN2
SSTR5
FGF23
PPP2R5B
H1-0
GCAT
KIAA1549L
WDR77
ATP5PB
VPS54
PJA2
SIVA1
FDXACB1
C11orf1
RAB5IF
RHOC
OVOL1
SRSF4
LAMB2
NFXL1
PTK6
TMEM17
AQP1
BRCA1
RPGRIP1L
FTO
RAB30
G6PC2
RSPH3
ZBTB47
MYL12B
ATP5MC3
SPAG8
HINT2
NFE2L1
DAD1
PNOC
HSD17B4
IDNK
SFT2D3
ARHGAP45
SLC35F4
PRXL2A
CASTOR2
GATAD1
CYP26B1
TES
BEGAIN
FAM86B1
GADD45G
PPIH
ARPP19
SLC2A9
ASAH1
TMEM120B
ACIN1
C14orf119
KRT7
P2RY4
TRIM6-TRIM34
TRIM6
CRK
USH1G
LPIN1
SMARCE1
DAPP1
PRKCSH
CCDC151
CLDN4
DTX4
C3orf52
ACTG2
RPL27
RTL10
GNB1L
SCARA5
TBX1
DEFB128
PHF5A
ACO2
LRCOL1
KCTD14
MLPH
RPL26L1
GDA
PDPK1
OSGIN1
NAT2
TRIM15
TRIM10
DNMBP
KATNB1
PTGR2
MUC5AC
ARHGAP10
STX18
SLC31A1
FKBP15
USP16
CCNI
ABHD2
HSPA5
HAO1
KIF21A
ZFAND2A
PELO
ITGA1
FLVCR1
STK11
ZNF184
ZNF367
STK40
CCDC200
SNRPF
RNF125
PPP1CC
TRIM29
SUCO
ZMYND8
CORO2A
B4GALT1
GBGT1
TLN2
SLC26A6
DIDO1
KDM2A
VPS28
TOMM70
LNP1
FAM102A
KREMEN2
PAQR4
CEP128
PRDX6
LRRC6
SLC6A9
UBA5
MTIF2
TUBG2
POT1
GATAD2A
PDSS2
MTHFS
SPO11
SMIM14
IBTK
RASSF1
GPD2
PRR5
DCLRE1C
SPATA25
NEURL2
CTSA
EFNA1
C1QTNF6
MOGAT2
LSM14A
CERS4
EPS8
MUC20
NUB1
HNRNPH1
SAXO2
EFL1
PFN1
ENO3
PSMA5
UGGT2
MRPS28
RPP25L
OGFOD2
RFT1
LARP1
IRF2BPL
PLA2G4C
PWP1
GOLGA8B
RNF114
DCTPP1
CLIP2
LAPTM4A
PLIN4
CMIP
SLC26A1
ATP13A1
CISD3
CNIH3
CYFIP1
TMOD1
IGSF9B
CYB5R3
UBC
FLVCR2
RBM8A
TRPC4AP
RFX2
NUAK2
RAB37
SMARCD1
RENBP
LOC730098
CCL27
MMP20
CLPX
ARHGAP12
SEBOX
PTDSS2
ANO9
GAL3ST1
POLDIP3
SAXO1
RRAGA
PPID
TCP1
MRPL18
ISCA1
ATXN7L3
MBIP
GM2A
NRL
DCAF11
STAT6
GLIPR1L1
CAPS2
OGA
ARHGEF5
NQO1
TRAF4
HCAR3
ACADM
SP2
NDRG1
SLC50A1
PRX
NR2E1
AP1M1
POLR2H
CLCN2
NFKBIB
ANGPTL4
MKNK2
REG4
MAP2K3
TSHZ1
CD200R1L
MRPL4
PLIN3
KATNBL1
FADS2
FADS1
BCL9L
PPP1R37
FBXW5
C8G
TOMM40
SPAG7
ELFN2
NCOA4
TLN1
CREB3
NT5DC1
WWC1
PMEPA1
CLDN14
NUP107
AMT
BOLA1
CDC14A
FRG2C
BCL2L13
ATP6V1E1
RNF169
PALM3
KIFC3
MEF2C
NEDD4
ITGA6
DOCK6
ZNF362
SLC28A1
TAOK3
SUDS3
ZNF207
CFLAR
LTBP3
DENND1A
ZBTB20
CA7
TMEM260
CCDC93
ZNF747
LMNA
BTBD16
UQCRC2
FRG2
APOBEC3B
NEIL1
FZD5
BAIAP2
MLLT6
CCNL1
AQP3
MFSD10
JOSD1
GTPBP1
SLC7A8
RNF212B
ATP8A1
UCK2
VEZF1
ID3
NIP7
COG8
RNF113B
UBN2
EVA1B
CLU
GUCD1
PUS10
PEX13
COL13A1
GAPDH
H4C12
SECISBP2
NR2F1
RBM7
C11orf71
WDR74
SNRPA
C19orf54
C6orf47
GPANK1
CSNK2B
ESCO2
CCDC25
SHBG
SAT2
TRAF7
GLI4
RAB26
USP36
ATAD1
RUVBL1
EEFSEC
ZSWIM8
CHCHD1
KIAA0754
FAM169A
USP3
OTOP3
BCL2L15
ABR
NOP9
DHRS1
GRAMD1C
FAM43A
CCDC88B
NUMB
PPP5D1
CALM3
PLEKHB2
CRYAB
C11orf52
ZNF181
VMP1
PTRH2
LAMA3
SMU1
TTC39C
SHF
ANKRD40CL
ZSWIM3
ACOT8
HSCB
C1orf105
ZNF230
PET117
KAT14
RAB3D
TMEM205
CCDC159
MPDU1
LOC100996842
CD68
SEC24C
MYBL2
PRAG1
ARSG
RB1CC1
MAP1LC3C
CHEK2
UCN2
GMPS
CES3
HBEGF
TUBG1
RETREG3
GTF3C2