ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MTRNR2L2
MTRNR2L8
NDUFS1
EEF1B2
RGPD2
RGPD1
PHF12
MTRNR2L9
NEK2
PRR3
GNL1
MIA2
SKIV2L
NELFE
CCDC90B
ATXN7L1
SH3D21
WDR74
SFRP5
CCDC107
RPS3A
CDC14B
SCARB1
WDR36
CSTF1
AURKA
KNL1
LBX2
ABLIM1
DKK4
C19orf12
SF3A3
SELENOP
SMARCD2
TNFRSF10B
NQO2
PPIP5K2
MRPS28
RPL34
GAB1
SP2
IST1
ZSWIM3
ACOT8
RBBP5
NR1I3
MTRNR2L10
MMACHC
ROCK2
MVP
COPS4
CEP128
ARPIN-AP3S2
ARPIN
UBE2R2
CD2BP2
ACY1
KRTAP5-7
RFX2
SAXO1
RRAGA
RBKS
BABAM2
TTC31
SF3B6
FAM228B
RAB17
CLASP1
KDM3A
MAN2C1
NUP107
GOLGA4
CLCF1
ARNT
INTS4
SEC23A
CSNK1A1
SH3D19
CDK5RAP1
MAFG
GUCA2A
YJU2
ZC3H12D
METTL7B
MAP1LC3C
PDXP
MMADHC
RFFL
S100A16
MGAT1
FZR1
PRKCI
ATF4
ALG10B
VPS54
PEX11G
TDP2
ACOT13
PGLYRP2
EIF1AD
BANF1
CCNI
TINAGL1
PRKCSH
CCDC151
TNPO3
ALDH3A2
PSMA5
LSG1
EIF4A2
PPP1R12B
BAAT
IPO4
ZNF827
U2SURP
YAP1
RABGGTB
SYT12
LDAH
BORCS7
RPS7
POLDIP3
TIMM9
KIAA0586
KLC4
MRPL2
RPL7
RDH10
POLR1H
CYP17A1
PTS
RNF121
LOC100133315
ZNF408
ARHGAP1
B4GALT4
LAPTM4A
SCNM1
LYSMD1
SLC1A3
NUDCD1
VGLL4
P3H4
FKBP10
MRPL11
SHTN1
RAB30
USP16
MLLT10
PAOX
PKP4
HNF1A
VIL1
HAAO
SHISA5
SCAF11
ORC2
PINK1
PANK1
TATDN3
NSL1
MAP3K11
SLC7A7
PCYT2
SLCO2B1
KIF21A
PABPN1
DEAF1
NEURL2
CTSA
ACOX2
HADHB
HADHA
ZNF567
NRL
DCAF11
GPR35
CREB3L3
MGST2
EPS8L3
SLC19A3
AGMAT
ACY3
IDH1
RAB37
SMG5
VAMP5
HNMT
PLEKHG6
ABCC6
IGSF23
AHCY
DHRS3
SRSF11
LRRC40
DENND2B
AJUBA
F10
AHSG
ZNF219
PUS10
PEX13
NR0B2
TRIM15
PPIL2
AQP11
FCHO2
DENND5B
APOB
SUCLA2
SDCBP2
TMEM177
XYLB
LOC100129484
CBS
ANKS4B
SLC45A4
GDI2
LARP1
TCIRG1
TK1
AFMID
NDUFA6
BLOC1S5
EIF6
CCDC142
PERP
IQANK1
FAM83H
TMBIM1
ADAP1
HGD
FYB2
IL32
NID1
CYB5R3
ZNF232
MCRIP1
GNAL
GSDMD
IFNGR1
SOS1
APOA1
ZNF764
MBNL2
HSPE1-MOB4
HSPE1
HSPD1
FASTKD1
CPPED1
PDE11A
ALKBH7
APOC3
GNG4
UBR4
RAD50
PEPD
HRCT1
WNK4
PHACTR4
CFB
C9orf64
PRAP1
CDKN2AIP
H4C3
TRIM14
C1orf174
F7
C1GALT1
ATP7B
ALG11
SEPTIN9
OPA3
CMC1
SMAGP
NR1D1
NEU4
DNMT3A
ZNF184
ABCD3
MIA3
SH3BGRL2
C3
INHBE
QPRT
UBA6
CBY3
IQCN
TM4SF5
PAK4
STX16
SMYD5
TJP3
HSD17B11
ANXA9
SEC16B
MTIF2
ATXN7
TMCO1
DOK4
BLCAP
SARDH
MST1
RAB32
DIP2C-AS1
BRCA1
ZNF564
MYADM
PLXNB1
MTMR4
MMP15
HMGCS1
BCL9L
TUBG1
RETREG3
AKAP1
SLC28A1
GIPC2
TRAF4
CIDEC
ZNF512B
AMACR
CRK
BIRC2
STARD7
SPATS2L
CCR6
SHF
VTA1
NMBR
SPATA2
SLC35A3
ISOC1
RBIS
DNAJC22
JMJD1C
SPPL2A
TAOK3
TBCCD1
GPR137
PAAF1
COA4
UBA5
SLC2A14
TANK
CLIC1
INTS9
HMBOX1
CACNB2
AGT
MSH5
PCGF5
TMEM140
FNIP1
KIFC3
MOGAT3
ZNF214
NLRP14
LCAT
MYO1A
ANKRD40CL
KMT5A
ASGR2
SOD2
VEGFA
SMLR1
ATXN2
VTN
C11orf24
TMEM150A
SCP2
PHF14
POLR2H
MPND
DDC
IYD
SEH1L
OTULIN
ENTPD8
TACO1
CSRNP1
MYL12B
MOV10L1
STK24
USP37
CNOT9
PLXNB2
ETFA
CYP4F3
UGDH
GPT
SLC35D1
DRG2
CPHXL
MAP4K5
CCDC93
ATL1
SLC39A5
C1orf210
GDF15
GALM
ZFYVE27
PGPEP1
MRPL20
ANK3
ST3GAL6
CDIP1
NIPSNAP1
GALK1
KRT8
TOGARAM1
KLHL28
GPHA2
GAMT
EHHADH
CAMSAP3
CHST13
C4BPB
TUBG2
CLDN4
GRB7
CRYGC
KPNA7
PRXL2A
SOAT2
ZNF444
PJA2
COMT
FUT5
ZNF747
CD86
CCDC146
NRSN2
CMPK1
TJAP1
UMPS
RFPL2
STARD4
LAMTOR5
TMEM181
ATP5MC3
PIKFYVE
DDX19B
RCL1
ZNF696
SOCS5
LIN54
PKLR
WFDC3
DNTTIP1
ACSL5
RNPEP
CREBRF
PGAP3
ERBB2
SELENOI
C2
ADGRF3
TMEM139
GSTK1
MAF1
TMEM254
SDC1
NGEF
POLR3A
RAP1GAP
METTL8
DCAF17
TCAF1
TMEM256
TECR
DNAJB1
ADD3
NUFIP1
GPALPP1
PDLIM2
MAF
C11orf49
CEP43
ZNF57
LSM2
PRDM10
MFN2
GFM1
THNSL1
C11orf86
NPTN
SLC41A2
MLF2
HPS5
GTF2H1
PTK2B
PCGF2
LSM14A
PRR5
CLRN3
ZBTB8OS
RBBP4
RBP5
CCDC71
GLTPD2
MARK2
HINT2
RCAN1
BRIP1
CRNKL1
CFAP61
F2
TPT1
RSPH14
ASB9
FTCDNL1
CYCS
TNS3
TP53I3
RPS15
PALM3
RNF149
KCNAB2
NOSTRIN
FUT10
GFER
PPP1R3D
FAM217B
MYH7
CES1
BTBD19
ACAP3
SLC10A5
TBP
PSMB1
SNRPF
ZFAND2B
AMN
TMEM71
PHF20L1
STAT5B
SDHAF1
APOM
SLC22A3
VPS28
GRTP1
LEAP2
CYP8B1
DYRK2
TMEM202
TRMT2A
RANBP1
FEM1A
POLRMT
CEP152
PYGL
PCK1
RBM33
RDH5
SLC36A1
IL7
PEF1
SEPSECS
AK3
SERPINA1
RNF19A
TTI1
RPRD1B
ASAH1
SNRPA
HPR
C2orf88
TREH
NGRN
TFR2
RIN3
SENP1
PFKM
MIEF1
CWC25
RPL27
PALM2AKAP2
ACACB
KIF16B
FABP1
PWP1
ZSWIM8
SLC26A1
LRIG2
RPGRIP1L
FTO
TF
AIG1
PRR13
OCIAD2
FBXW5
C8G
ASGR1
PAFAH2
BTNL8
ABCC2
HBP1
BPHL
ZNF343
CALML4
SASH1
ZNF165
CHCHD2
LOC110384692
C4B
C4B_2
C4A
RHBDD1
IRS1
AIFM2
APOC2
SURF4
STX18
MAP2K3
SLC31A1
HYAL2
FKBP15
ANKRD26
COQ5
TIMMDC1
LGALS2
LINS1
ASB7
GRM4
ITPK1
ARL5A
FDX1
ORM2
ETV4
TWF2
NFATC3
F12
POMGNT1
CD99
DECR2
AXL
UFL1
MTFR2
SLC22A18
HOXA3
FAM185A
DNAJC15
EPHX2
RWDD3
EIF4EBP3
SSTR1
SSUH2
TPRN
TFDP2
TTI2
AAR2
VCPIP1
EFNA1
C8orf44-SGK3
SLC2A4RG
STN1
SRSF4
ORM1
SORT1
CLPB
NR2F2
DOK7
MRPL40
HIRA
ACSS2
CYP19A1
SLC22A9
ZFR
SLC30A1
RFX7
DCLRE1C
LTV1
DGKD
SLC22A7
CYB5A
ETV5
PIPOX
APOBEC1
SYN3
WDFY3
ARMC5
GCHFR
AATK
CFLAR
GSTM4
BAZ1B
KATNB1
NFE2L2
SLC38A10
LIME1
PHF7
CYP27A1
BAP1
MNAT1
CHD1
NODAL
HEPH
VANGL1
ERF
ADGRG7
DHRS7B
ALG14
SCO2
C3orf86
YEATS4
IGF2BP2
PTPA
CRAT
ASPDH
HP
CXCL17
MRPL24
NRBF2
PDZK1
USP10
RMND1
ARMT1
ACAT2
LRP1
APOA2
GAB2
TMPRSS4
GPR108
GFI1B
RBMS1
ZNF529
CHMP4B
CCDC68
EMP1
POT1
C11orf91
INVS
ERP44
FZD5
OSBP2
ESRRA
ACOT7
SMIM11B
SMIM11A
PIM3
SERPINF1
SERPINC1
ZNF548
CLDN19
AMT
SLC51B
PYROXD1
BOLA1
MRPS24
EPS15
ABAT
ENGASE
ARHGEF16
SERPIND1
N4BP2L1
COX16
NFXL1
MRPL44
PSMB3
GGCX
CDK11B
CDK11A
ADPRHL1
CX3CL1
MEP1A
FGFR4
ARSB
RREB1
LMO7
PROS1
ZNF384
DAO
EPS8
PKP2
UGGT2
GSTO1
TLDC2
SECTM1
AGPAT1
SMG8
RBM42
ZNF230
POLD4
ATAT1
SULT1A4
SULT1A3
CLNS1A
NOP9
DHRS1
PLA2G12B
TECPR1
PLEKHJ1
C11orf52
SLC16A3
PRPF40A
BANP
TOMM70
LNP1
SUOX
MAIP1
CLUAP1
MRPS30
ZBED4
SLC25A16
MSLN
H4C12
RNF31
PSME2
FAM136A
NSUN5
ACO1
WDR90
TSKU
ATP5MF-PTCD1
ATP5MF
ATXN1
UTP14C
TRIM35
BSDC1
STK11IP
SHPK
CTNS
PTBP1
PACSIN2
VARS2
C19orf54
TCEA2
PPP1R37
SH2D5
FAM98B
CNOT2
BDH1
SLC25A45
AASS
DLC1
TIA1
PARP4
MAOB
ZNF101
GMPPA
GPANK1
CRADD
ACOT2
ZBTB4
POLR2A
MUC13
CRLS1
RNF5
GOLPH3
SEMA3B
CMTM8
PROZ
NME1
MTARC1
IL13RA1
SP5
RBP4
FITM2
SNX7
PCYT1A
SLC19A2
MIIP
RPL12
LRSAM1
TMEM19
KYNU
ALDH2
TMEM101
NOTCH2NLC
NPM2
NEDD8-MDP1
NEDD8
GMPR2
MAGI1
GBF1
TOMM40
RPL41
NAP1L4
MASP2
NR1H3
FBLN1
SUSD2
CSNK2B
CRPPA
NAB1
MT1F
KIAA2013
DUSP18
IL11RA
SNRPB
EPHX1
EHBP1
NUP210
TMEM143
SYNGR4
GMNN
SLC40A1
TYMSOS
TYMS
TMEM115
FOXJ3
LRRC29
CLSPN
SF1
PNPO
IFIT3
RHOBTB2
CNKSR3
ZNF225
TMCO2
IL1RN
IQGAP2
HDHD3
DLX2
GANAB
TSNAXIP1
RANBP10
BPIFB2
NOTCH2NLB
NOTCH2NLA
ECI1
PTGR2
PKIG
MYO7B
HNF4A
AP4S1
TMTC3
HLA-A
GLT8D1
CEP290
RSPRY1
N4BP2
LEKR1
METTL25
CCDC59
IQSEC3
RAB42
AGFG2
ALDH5A1
GCKR
CCR1
RPP40
LTBP3
FLVCR2
SENP3
IRF5
PTPRG
NUDT13
NR2F6
LZTS3
RMND5A
GDPGP1
CIB1
TNFAIP8L1
G6PC
UHRF1BP1L
H4C8
C1orf115
DUSP15
PEX3
ALDH3B1
ADAT2
MTRNR2L6
ZNF565
ZNF146
TRIP4
RBM39
NIPAL1
CNGA1
ELK4
STAT3
DONSON
SF3B2
EPS8L2
HERC5
AKR1C4
RASA4B
CBWD5
CBWD3
C18orf21
MYO1E
EDEM2
CDHR5
SHPRH
PFDN4
CLYBL
DLGAP4
ZNF181
E2F5
UNK
GOLGA6L2
ID1
WDR81
USP42
SESTD1
OCIAD1
MON1A
HNRNPH1
CAMK1