ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702138 | hESC derived ectodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◣ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
SMCO1
PI4K2B
SNX16
BTBD8
OR2T1
MUC3A
BRSK2
SEM1
PDE11A
FRG2C
TSPAN5
TLR2
MUC2
SLC28A2
GPD1L
SLC30A7
EXTL2
ZNF572
YIPF7
AKR7A3
ZWINT
KCNJ15
SMYD3
DUX4
ZNF550
OBSCN
THEM4
CCDC200
ZNHIT6
ZNF436
CYB5R4
WDR33
EIF4A3
AADACL4
F2RL3
LDHD
ZBTB8B
ST20-MTHFS
ATP5F1B
PDP1
FAM209A
MID2
TSKU
BSDC1
YPEL3
TBX6
LOC102724770
DGCR6
BPIFB3
IRAK2
MKLN1
ITGB3BP
EFCAB7
THUMPD1
ZNF24
RGS18
FAM153B
FRG2
ZNF433
FGD3
CNGA1
SNCG
MMRN2
ZNF708
UBE2F
EIF4EBP1
GTPBP4
DBNDD2
ZSCAN32
ZNF174
FAM184A
UQCRC1
TBC1D22A
KRBA1
WDR74
TMEM89
ZSCAN31
GLT6D1
ZSCAN30
RHOT1
STX5
MANEA
COL23A1
MTRNR2L8
COX6A1
LMLN
IQCG
CRP
ANP32D
TTLL1
TATDN2
LMLN2
GPR35
IER3IP1
ADAM21
ZNF143
MSH3
DHFR
CDCA7
ZBTB26
RABGAP1
PRDX6
ZNF555
ZNF117
SHISAL2B
CPT2
APOC3
APOA1
TEAD2
DKKL1
MTRNR2L2
FAM234B
MYH2
PTGER2
C2orf88
GORASP2
RGS21
LEP
CYP2C9
COQ9
CIAPIN1
DEGS2
TACC1
EDF1
CFHR4
ACY3
PTPRN2
ZNFX1
ZNF792
PIP
ZNF3
MBOAT4
DCTN6
C10orf143
FAM193B
BCAR3
B4GALNT4
PDE4DIP
TTC7B
SULT1C3
PRSS38
OR4K17
FEM1C
ADCY10
ZNF527
APOBEC3B
IL22RA2
ZNF134
TMEM229B
ZNF324B
ZNF132
BAAT
SUMO3
C2orf66
PADI4
PER3
VPS13D
METTL8
COMT
CCL24
MRPS16
TXNRD2
NKX1-1
PPIG
PEX7
INKA2
DDX20
DCAF17
HACD2
KAT6B
MINDY3
MAP3K4
ZNF514
ST3GAL5
DMXL2
TMEM242
NT5C3A
GSTM5
NUF2
SLC27A5
ZNF562
SARS2
MRPS12
YJU2
PPP2R3A
SELENBP1
RBPJ
MAPRE2
RBBP5
MTF2
NXPE4
RAB37
SPATA33
PXDNL
PNMA3
SLC1A7
COL18A1
SCCPDH
CTAG1B
CTAG1A
ZNF426
FDX1
C19orf18
IFNAR2
ELAC1
SNX11
CBX1
ZNF83
NOTCH2NLC
IGFALS
SAP130
YWHAQ
SNX20
CALCB
TTC30B
NOTCH2NLB
NOTCH2NLA
C2orf69
ZKSCAN7
ZNF30
RABGAP1L
CYP17A1
ARHGAP39
DNAJC25-GNG10
DNAJC25
FAM227B
DTWD1
NARF
CLIC3
APOL4
DIO2
GBA
RTP5
CAT
POLD1
YY1AP1
DAP3
BCR
PSMD8
ARHGAP45
GPRC5C
METTL7A
ACAA2
ZBTB44
RPS7
MTRNR2L1
NRARP
GALNT1
TMCC3
RSU1
PAIP2B
MROH7
NEMF
DIP2B
LBP
DMAP1
ZNF761
DIP2A
MON2
MAPK11
ART1
ZNF556
ZFP30
AURKAIP1
SAMD4B
MRPL55
GMFG
FASTKD1
UBE2D3
DUSP6
SF3A3
RPL39L
ACYP2
ACER2
CISD2
ZNF501
ZNF623
IFI6
SSBP1
TEDC1
CRIP1
EXOC6
ZNF662
ABLIM2
RFC1
TMEM62
ZNF627
ZNF165
FRMPD4
CYBC1
TIMELESS
TMPRSS12
SPACA3
C1GALT1C1L
PNPLA7
MRPL41
SMIM31
CRIP2
COX16
LCN8
ACBD6
PLA2G4E
LILRA5
LMTK2
FGL2
CLPP
RBM33
FBXO31
SUPT6H
SDF2
PDCD7
RPL10L
ZNF443
GRAMD4
TARS2
LCN15
SAMD14
SDR42E1
TYW3
CRYZ
C4B_2
C4B
JMJD1C
TBC1D19
CD209
ACOX3
SRPRB
PAXBP1
MAD1L1
NOX5
NCKAP1L
CREBL2
ACP6
C16orf54
CHD1L
SELENOH
FAAH
B3GALT2
LGALS12
FRRS1
HAUS5
MACC1
DCP1A
PRKACB
LRIG2
RPS29
CCDC130
PRRT1B
MYLK
SLC2A7
TMCC1
RNASET2
ZNF878
EPB41L2
COMMD2
MED23
MRLN
MAP3K2
TRIP4
PCLAF
PEX3
ADAT2
EAPP
FRA10AC1
SATB1
TESK2
MMACHC
PLAAT5
ZNF487
BAX
RPL27
IFI35
MYOG
OAZ3
HTR5A
SCGB1C2
SCGB1C1
CXCR2
ZNF613
ZNF341
NUDT15
UGT1A10
POU2F1
CANT1
NFE2L3
B4GALNT3
RBBP9
MRPS33
C3orf14
ZNF594
SPATA13
ARL4D
C1orf159
CEP85
KIF2C
RPL11
WDR3
TTC32
GDAP2
TDP2
ACOT13
TAS2R39
BTN3A3
BORCS7
NBPF1
DSTYK
MOB3A
IZUMO4
NPAS4
CLTB
ZER1
LOC110384692
C4A
RPGRIP1L
FTO
SUPT7L
SLC4A1AP
TATDN3
NSL1
PIAS2
COLEC11
LUC7L2
REM1
DEFB124
FKBP9
TM9SF2
FKBP11
FMC1-LUC7L2
FMC1
ZNF577
LSS
ZNF502
ACTL8
SMAD1
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
MSRA
CD2
ODF3
TRMT44
FN3K
CALD1
THOC5
NOTCH2
MDM4
EFCAB10
STX18
TMEM161A
PIN4
NDUFS7
VBP1
ZNF614
TMEM14C
SPATA22
ZNF566
GAS2L3
LRP5L
SEC22B
GJC3
NME1
GLRA1
SLC38A9
GALK2
TMEM125
SLC33A1
EIF2D
INTS12
GSTCD
ZNF891
ZNF10
LHFPL4
SCAF11
ZC3HAV1
TACO1
TEX50
SLC41A3
SEMA3D
PARK7
TMEM44
CHST3
RTP3
LTF
ETFBKMT
TMEM262
ITPR2
TBC1D13
FEM1B
PCYOX1
ZNF32
TMEM106C
ASPA
KDM3A
LCN6
SLC17A5
PGLYRP4
TEFM
NOS3
TMCO2
RRAGB
SAR1B
VPS37C
ADAMDEC1
TM9SF1
GTDC1
DLAT
ZNF611
LRP5
BRF2
SNAP47
PLK2
RPL37
CARD6
REEP3
LIMS2
LOC100289561
ZNF391
GCNT1
KIF5C
S100A2
RMDN2
NRL
DCAF11
DUSP16
CYC1
RGPD2
RGPD1
NARS2
CEACAM21
RERE
MNAT1
CALCRL
PHRF1
MAPK10
LSG1
LARP1
MTERF1
FAF1
REXO4
ADAMTS13
ACSM2B
VN1R4
CASP10
ERN2
CD14
MLLT1
ZNF491
TRMT5
SLC38A6
SMIM12
POLR3B
STX16
RPS14
ADI1
NTSR2
DRG2
CADM2
KCNMA1
SKP2
LMBRD2
FKBP5
ATP9B
IL21R
NCOA7
ZNF829
ZNF568
ZNF589
GTF3C3
DHRS2
HMGB1
TMEM41A
GTF2A1L
VARS2
GTF2H4
MOB4
UBE2H
PRIM1
NEU1
HSD17B6
ALG10B
DNAJB12
ZNF440
METTL25
CCDC59
POM121
SAMD7
CYP4X1
NDUFV1
PSEN1
ANGEL2
C5orf60
WDR36
TTC26
AIG1
STC1
HLA-E
B3GNTL1
UTP3
INPP4A
PPIP5K2
FABP6
ERV3-1-ZNF117
ERV3-1
BABAM1
TFPI
SERHL2
SPANXB1
LPIN1
DCAF10
CYP46A1
GTF2H2
RTCA
INTS5
GANAB
TMBIM4
DNAJC3
ZNF285
PAFAH2
C10orf99
CASP4
PRDX3
ST6GALNAC6
GPAA1
EXOSC4
TEX46
KDM1A
WDR11
MIPOL1
ZNF300
FNIP2
POLR2J3
CNIH4
ZKSCAN3
RSF1
PDCD6IP
AAMDC
MTR
ATL1
CTSF
ZNF317
PDCD2
RNF126
TBC1D14
SRSF7
RTTN
ATP5MC2
NCEH1
TOP3B
VTA1
NMBR
ZNF772
VAMP1
PROKR2
MACROD1
CHMP7
USPL1
TXN2
TFPT
PRPF31
ALDH7A1
DEK
POLE4
DPY19L4
COQ8A
PIK3R1
RAB30
DISP1
INO80C
GABPB2
CDYL
POLR2J2
MS4A10
MTERF4
RPIA
MAGEB1
L2HGDH
DMAC2L
TBCK
AIMP1
RWDD2B
MAIP1
RAD54L2
KANSL3
FER1L5
TMEM68
TGS1
STAT3
RPL32
SLC25A51
CCDC150
ZNF350
ALDH3A2
CLEC12A
C1QTNF1
RUVBL1
NME4
DECR2
IPO4
UBN2
C9orf64
PXDN
ZSCAN29
TUBGCP4
CNOT3
TAF12
CLK4
ATF7IP2
ATF7IP
PUM1
F2RL1
DGKQ
CNOT6
BFSP2
ALKAL1
NPR1
ILF2
TOR1AIP2
TOR1AIP1
SRFBP1
ESR2
EIF3F
DNAJC6
BANP
PRAMEF1
ZNF441
ADNP
NAXD
FAM120B
DCLRE1B
AP4B1
MRPL44
ATP6V0A1
PRKAR2B
ACTRT3
ENG
KMT2A
SAMD4A
NDUFB3
FAM126B
DNM1L
ZNF408
ARHGAP1
EDNRA
TTYH2
TLE7
POLDIP3
ZNF222
ATP5MF-PTCD1
ATP5MF
SPATA6
H4C12
H4C11
SLC44A1
NMNAT2
LY6L
BAIAP2
NUP54
TIGD2
EFHD2
TMEM43
CHCHD4
AGL
INPP5F
ADCY3
METTL27
KSR1
AP3B1
SLTM
MRPL30
MITD1
GTF3C5
ZNF680
MRPS31
LIMS1
PPM1K
ZDHHC9
GTF2H2C_2
GTF2H2C
CCNT1
KRTAP5-2
EPRS1
LBR
CDK5RAP1
SGPP1
PLEKHM3
MYO5C
STK19
SPAAR
HRCT1
DXO
RPL30
IQGAP1
ARRDC2
CCDC97
SLC45A4
PPP1R3B
NR1H3
ACP2
CEP72
HERPUD2
TAAR9
PHB
BDH1
TTI2
AARSD1
SLC35G5
CRELD1
PPP6R1
MRPL40
HIRA
MUC21
ESCO1
ZNF557
CFAP298-TCP10L
CFAP298
ELAPOR1
IFIT1
CAPN11
PTRHD1
CENPO
CDC73
PHGDH
IQSEC3
RCHY1
TMBIM6
MRPL21
IGHMBP2
ZNF582
CYP4F22
CLDN4
KLHL41
MTIF2
JMJD4
PLA2G1B
IQCF2
C11orf49
MRPS18C
HELQ
IL36B
PSMF1
MAP3K19
OR8B3
BAG3
COX7A2
H4C8
UBE4B
PMF1-BGLAP
PMF1
ORC5
PRKAG2
OPA1
TULP4
LMBR1L
DNAJB13
BFSP1
BNIP1
TXNL4B
DHX38
MOS
DIS3L2
FAIM
ZNF841
S100A9
SNIP1
DNALI1
IL36A
LCA5
C10orf53
RCAN1
VPS11
NSFL1C
SNRPB
KRTAP10-7
PDRG1
CCNC
TBL1X
ANK1
STXBP5L
TRIM69
NUDT9
CAMP
MRPL48
PARP15
SBNO1
MYNN
DTX2
TNXB
ARHGAP19
RNF217
FAM228B
KLRD1
ZBED9
PARP14
TMEM79
SMG5
GFM2
C8orf37
PAAF1
GLIPR1L2
C18orf21
OR1E3
PDXK
PDE6D
COPS7B
SMG8
BMS1
ATR
TTC5
ASNSD1
ASDURF
SRRM3
PRR4
STAM2
OR2L5
USP30
OLFML3
TMEM109
GINS1
IFT88
HIP1
PES1
SMU1
NSMAF
REN
LRRC61
ACTR3C
HGS
ARL16
MIF
ZNF429
XKR7
SUN1
MRPL1
PRSS41
OR2AP1
SLC25A12
CDT1
UPK1B
STAT1
CELF2
LRTM2
ZNF554
PACSIN2
RANGAP1
CD200R1L
PDE1C
OXLD1
CCDC137
EDARADD
CYB561D1
EIF1AD
CST6
BANF1
BEST2
MTOR
ZNF34
THOC2
ABR
AHCYL2
EML2
AFAP1
EXOC2
RNF187
C5orf34
EPB41
FGFBP3
IQGAP2
ZNF292
RMND5A
CAPN8
ATP1A1
TP53I3
SF3B6
LRRC59
PARP16
ACOT2
GNAL
C1orf167
GIMAP4
CDC23
RAB6D
CATIP
EMC8
COX4I1
URI1
PRIM2
ASPSCR1
KLHL20
AKAP10
F11R
MS4A1
TMEM202
AARS2
ALKBH3
AUH
IL36RN
GSTA4