ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702027 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◣ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PKP4
CCDC148
HAAO
ATXN7
LBX2
PCGF1
RBKS
BABAM2
STARD7
FNIP1
PINK1
RPS3A
VIL1
ABCD3
PERP
MGAT1
MACC1
ZFAND2B
SHISA5
TNS3
RAB32
AGMAT
PRKCD
SMG5
GLMP
TATDN3
NSL1
C1GALT1
CRYBG2
MGST2
KCNIP4
FGFR3
SKIV2L
NELFE
MRPL20
NEK2
TMEM177
AHDC1
ORC2
UGDH
PDE11A
CSRNP1
MMADHC
SRSF11
LRRC40
COPS4
DMAP1
SCLY
NUDT16
CDKN2AIP
CSRNP3
DNMT3A
TIMMDC1
LOC100129484
CCDC71
KLHDC8B
CREBRF
RHEX
ARHGEF16
HNRNPDL
ENOPH1
SLC35D1
VTA1
NMBR
TCTEX1D4
BTBD19
CMPK1
PRPF40A
ARL6IP6
MFN2
CNNM3
SH3D19
TMEM178A
RAB43
HSPE1-MOB4
HSPE1
HSPD1
RABL3
GTF2E1
PSMA5
MANEA
HSD17B11
NR0B2
CCDC93
KLF7
ZNF362
CLDN19
WDFY3
HMGCS1
MTARC1
UBR4
N4BP2
SNTG2
ATXN1
PPP1R12B
GMNN
PHACTR4
TTC31
CCDC142
VANGL1
FAM110C
DHRS3
TSEN2
TMCO1
HEXB
ZFR
LRRC1
GCLC
C1orf174
DENND2C
TFDP2
MMACHC
GSTM4
CERS2
EXOC1
RWDD3
GALE
LHX4
ZBTB8OS
RBBP4
RAB17
ZFP36L2
LY75-CD302
LY75
METTL8
DCAF17
EIF4EBP3
IL17B
FYB2
BTN3A2
MYO1G
TP53I3
SHPRH
MEF2C
RGL1
ARPC5
ALCAM
ACY1
EDEM1
PJA2
RNF220
HADHB
HADHA
LRIG2
ACOX2
PPIP5K2
TPM3
FASTKD1
MIA3
C2orf88
IGF2BP2
FAM200B
LAMTOR5
GOLPH3
INAVA
UBA6
TSN
PHF1
POMC
FOXD3
PRR3
GNL1
GFM1
PCDH1
XPR1
TMEM17
OTULIN
MSH5
CLIC1
CMC1
CERKL
SYNCRIP
PIK3R1
CTTNBP2NL
UMPS
SELENOP
UFL1
APOB
GNAT1
PHF7
BAP1
FTCDNL1
CRYBG1
ZNF687
FAM120B
DLL1
FIGN
CADPS
SEC31A
NFXL1
HUS1
LARP1
VGLL3
TMEM184A
ACSL1
MPC2
DCAF6
RBMXL1
KYAT3
ARHGEF10L
TWF2
CFAP91
ZFAND3
CFAP65
TNIK
LGR6
ARL5A
TMEM63A
DCHS2
RREB1
FAM78B
EHHADH
SMIM12
MXRA8
FAAP20
VAV3
SIAH2
SLC6A19
RPP40
EIF1B
GNAT2
AMPD2
LAPTM4A
KHDRBS1
NDUFS6
MRPL36
MUC20
PRSS56
DLG1
CLSPN
PDLIM7
TRDN
FBN2
ST3GAL6
SLC25A24
PDE7B
PEF1
B4GALT4
EHBP1
CEP43
SLC22A2
TOMM70
LNP1
MME
ARHGAP31
GIPC2
SMLR1
CGN
B3GNT2
OR2T1
IFIH1
GCA
DKK2
KANK4
C1orf53
SEC13
TMBIM1
SOS1
SH3BGRL2
NAB1
VAMP5
CHST13
WIPF1
BSDC1
SESN1
CEP57L1
PDGFRA
ZNF124
TMEM150A
XYLB
ZNF827
LMNA
MEX3A
VARS2
MAST4
C3orf52
ANTXR2
IL6
KIAA1522
ALDH5A1
LMX1A
PDE4DIP
EIF4G1
IGF2BP3
SLC16A14
GGCX
TIA1
TMEM144
SNX7
SEL1L3
IPP
C1orf115
OCIAD2
AGPS
NDUFS1
EEF1B2
TRIP12
FBXO36
KCNK16
TCOF1
TNRC18
SLC40A1
MTHFD1L
LRIG1
ATP2B4
RIPK1
TTC39A
GPBAR1
AAMP
AP5Z1
CAPN11
ZBTB48
ATAT1
INTS7
DTL
AGTRAP
TAF9
RAD17
AK6
SATB2
TAF11
ANKS1A
DPPA4
AGPAT1
RNF5
IL18R1
FSTL4
UCP1
TBCCD1
DNAJB11
SELENOI
ADGRF3
KIAA0754
CMTM8
SERINC5
HLA-A
NIPAL1
CNGA1
OTUD4
SPRR1B
SCOC
RBM8A
PXDN
ANXA9
LPP
PUSL1
ACAP3
ETFDH
C4orf46
HESX1
NID1
PEX3
ADAT2
EML6
ETNPPL
HYAL2
TUSC2
MTMR11
USP37
CNOT9
SOCS5
PDZK1
FAM71B
PAX7
SLC30A1
SPRY4
RUVBL1
CTNNB1
SOD2
STX18
EFHD1
ADAMTS9
NGF
CD244
TMIGD3
TIGD4
ARFIP1
ADORA3
MEGF10
GMCL1
TRABD2A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
METTL24
NAA50
ATP6V1A
TBX18
URGCP-MRPS24
URGCP
CLASP1
RAP1GAP
INPP5B
ABRACL
SLC22A3
TTYH3
ELF3
AOX1
SLC25A4
GRIK2
SEPSECS
PDE1A
SLAMF1
SEC16B
ZDHHC19
SLC51A
MAIP1
FOXJ3
BMP8B
RPL34
SDC1
MSL2
KIFAP3
NFIA
FAT4
BLOC1S5
TMCO2
RPS6KA1
CFAP299
ERMN
PLPPR4
GLYCTK
RARS2
ORC3
SLC2A9
UBE3D
DOP1A
HIVEP1
RABGAP1L
BZW2
ANKMY2
COBL
ABCA4
CREB1
LARP1B
SFXN5
OXCT2
MICAL1
SOX13
AMT
IRF2
RMDN2
CCDC181
PUS10
PEX13
PLSCR1
MAN1A1
RAD54L
SLC35A3
UTS2B
CCDC50
TRIM15
TRIM10
COPB2
ACAT2
GOLGA4
NQO2
MTRR
FASTKD3
RPP14
HTD2
MIA2
LTB4R
LTB4R2
CIDEB
PHF12
PAOX
CSTF1
AURKA
ERBB3
MAMDC2
MVP
PTP4A1
KDM6B
HNF1A
SLC9A3R1
SPON1
ATXN7L1
MTRNR2L8
VTN
SARM1
KNL1
TMEM169
PECR
SCAF11
SEBOX
MTRNR2L2
MSH3
DHFR
PDXP
LASP1
TACR2
DNAJC25-GNG10
DNAJC25
MYRF
RIPK4
RAPGEF1
NUMB
RGPD2
ZFP36
PLEKHG2
SCRT2
PANK1
RGPD1
PCNX3
MAP3K11
SLC7A7
NR1I3
PPP5D1
CALM3
PCYT2
CCDC90B
CCDC107
DOCK6
NCS1
SLCO2B1
ERBB2
KIF21A
GPR171
CDK3
SMPDL3A
PABPN1
WDR74
EPS8L2
DEAF1
SPATA25
NEURL2
CTSA
USP2
ACSL5
CLIP2
IST1
ARHGAP27
METTL7B
PHETA1
ZNF567
GGT1
LENG8
NRL
DCAF11
GPR35
SLC20A1
CREB3L3
AHCY
CPLX2
AFF1
USP18
SLC7A5
SEC23A
CDC14B
ABLIM1
EPS8L3
AP1M1
SLC19A3
DNAJC22
CARHSP1
ACY3
FUT5
IDH1
LOC100509620
RAB37
GPX4
HNMT
C1QTNF1
PRUNE1
MINDY1
PLEKHG6
GUCD1
DENND2B
B4GAT1
ABCC6
NCOA4
IGSF23
IL20RB
DOCK5
CDR2
AJUBA
F10
WEE1
CAMK2G
GAB1
AHSG
CYP17A1
ZNF219
CDHR2
TDP2
MYD88
ACOT13
ACAA1
PRKCSH
CCDC151
SFXN3
PDZD7
FBXO31
PPIL2
TIGD3
DIDO1
PDF
AQP11
FCHO2
DENND5B
RABGGTB
SUCLA2
NR1D1
SDCBP2
GLRX
SPATA2
PLXNB2
GTF2I
TRAF7
POLD4
NQO1
CCND2
KIAA2013
CA9
ARHGEF39
CBS
ZC3H12D
SPAAR
SCARB1
ANKS4B
SLC45A4
BCAR1
AFP
GDI2
C19orf33
TRIM48
TCIRG1
LURAP1L
MRPL2
KLC4
TK1
AFMID
NDUFA6
KIF1C
INCA1
KRTAP5-7
CTDSP1
EIF6
RGS3
ATP7B
RAB5IF
PTDSS2
KLHDC2
ANO9
SMARCD1
CORO1C
MLXIPL
IQANK1
FAM83H
CBY3
SMAD3
S100A16
ADAP1
SNRPA
C19orf54
HGD
MAN2C1
GJB1
IQGAP2
IL32
MTRNR2L1
CYB5R3
ZNF232
USP6
PLEKHB2
TJP3
PPP1R27
MCRIP1
WNK4
SRMS
APOC3
TBC1D22A
GNAL
GSDMD
B3GNT3
KDELR2
IFNGR1
GAL3ST1
APOA1
TKFC
DDB1
DBP
NIBAN2
NEK4
ITIH1
PTK7
C11orf24
ZNF764
GNG4
MBNL2
ZBED9
LRP1
PRDM10
TRIM47
CPNE7
PALM3
CPPED1
ERICH3
SEPTIN9
PTPRF
HINT1
PSPN
ALKBH7
BORCS7
SPG7
SPPL2B
LSM7
RAD50
PEPD
IL1R1
HRCT1
PROCR
PDPK1
CFB
PPP4C
C9orf64
IRF2BPL
ATP5F1D
LTV1
SMIM19
SLC20A2
PRAP1
HDGF
H4C3
H1-6
VWCE
TRIM14
AGT
GIP
PRSS8
F7
UCKL1
ALG11
COL13A1
TECTB
OPA3
TNFSF15
NHSL1
WDR81
EEFSEC
ENDOD1
C11orf86
SMAGP
NEU4
PLA2G4C
MBL2
EPHX2
LIPK
ZNF184
EGLN1
TADA1
LSM1
BAG4
ZFAND2A
CXCL17
SLC27A5
SH3YL1
ACP1
C2CD2L
TNFRSF10B
TRAF4
C3
INHBE
QPRT
PRXL2A
MIDN
KHNYN
CBLN3
HAGH
FAHD1
UBA5
IQCN
AKAP1
TM4SF5
PAK4
TCAF1
DOK4
ADGRG1
GPRC5C
STX16
WDR36
SCN9A
PEMT
VEGFA
HJV
NCR3LG1
SMYD5
PRMT1
HCAR3
BCL9L
SIN3A
CSNK1A1
COMTD1
CRK
MTIF2
ZNF710
POLR2E
BLCAP
SARDH
OTOG
KIF5B
STK24
RAMP1
OSBP
FBXO46
MST1
DIP2C-AS1
BRCA1
ZNF564
MYADM
PEX11G
CCL16
PLXNC1
PLXNB1
MTMR4
PDGFB
MMP15
LRP5L
EFNA1
PRR35
PCGF2
DCBLD1
PNOC
FAM20A
LRRC3
PTTG1IP
CD2BP2
BAIAP2L2
TUBG1
RETREG3
SLC28A1
ABHD12B
TUBG2
SPDYE14
SPDYE10P
RHBG
CIDEC
ZNF512B
AMACR
BIRC2
SERINC2
SERTAD2
SPATS2L
TLCD2
RBP5
CCR6
PMVK
SHF
CDKN1A
RASA4
ISOC1
OR5B12
ASL
RBIS
MKKS
JMJD1C
SPPL2A
MTRNR2L9
CAMKV
MBLAC1
TAOK3
SUDS3
RARA
PPIAL4C
PPIAL4A
PACSIN3
POLDIP3
GPR137
RCAN1
ANKRD40CL
RBMS1
PRSS3
DLX2
PAAF1
COA4
ZC3H3
PICALM
ACAD11
SLC2A14
TANK
NUDCD1
KANK1
SEH1L
SLC47A1
PLK2
DDC
BCL2L1
USH1C
INF2
SYNJ2
SECTM1
PGF
INTS9
HMBOX1
TACO1
MRPS11
MRPL46
CACNB2
RPS7
PPIAL4H
PCGF5
SLC17A2
TMEM140
PAX2
ABCC3
KIFC3
MOGAT3
TRPM1
HOXA3
MYL12B
ZNF214
TMEM45B
NLRP14
LCAT
ETFB
ABCB6
TMEM127
CIAO1
MYO1A
MSRB1
RENBP
MPI
NEU1
KMT5A
CYP4F3
RHOC
ASGR2
ABR
RASA4B
TMEM89
CEACAM16
MLX
COASY
TOB2
CTSO
PAK1
IL17RE
DNAJB3
ATXN2
FZD5
SRC
CFL1
ARNT
HPCAL1
ROMO1
ODC1
PPIAL4G
ALDH3A2
AGPAT3
WT1
SCP2
PHF14
COMT
POLR2H
CLCN2
STAP2
MPND
KDM2A
DCDC2
IQSEC1
IYD
ANKRD39
LSM14B
IL17RB
CHDH
TAF4
ITPKC
COQ8B
ASAP2
ZNF302
C5
ENTPD8
RHOQ
ATP6V1E2
PPIAL4F
PPIAL4E
PPIAL4D
ZNF839
SFRP5
KRT8
CAPN2
SORBS2
CPNE6
VPS54
MOV10L1
SEPTIN4
GNA11
LTBP4
ETFA
UGT1A1
CHMP4B
INTS4
GALT
CDC42BPA
GPT
C6orf47
C2orf42
DRG2
PLEC