ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702027 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◣ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PKP4
CCDC148
HAAO
ATXN7
PCGF1
LBX2
RBKS
BABAM2
STARD7
ISG15
HES4
FNIP1
PINK1
RPS3A
VIL1
ABCD3
UQCRHL
PERP
MGAT1
MACC1
ZFAND2B
TREX1
SHISA5
TNS3
RAB32
AGMAT
PRKCD
VHLL
TMEM79
SMG5
GLMP
TATDN3
NSL1
C1GALT1
CRYBG2
MGST2
KCNIP4
FGFR3
CEP85
SKIV2L
NELFE
MRPL20
CCNL2
NEK2
TMEM177
AHDC1
ORC2
CPNE4
UGDH
PDE11A
RHOC
CSRNP1
MMADHC
SRSF11
LRRC40
COPS4
DMAP1
SCLY
NUDT16
CDKN2AIP
CSRNP3
PKIB
DNMT3A
TIMMDC1
TNRC18
LOC100129484
CCDC71
KLHDC8B
CREBRF
SOWAHA
RHEX
KLHDC7A
PITX2
ARHGEF16
HNRNPDL
ENOPH1
SLC35D1
GBP6
TBC1D19
VTA1
NMBR
TCTEX1D4
PLK3
BTBD19
CMPK1
PRPF40A
ARL6IP6
DEFB131A
MFN2
CNNM3
SH3D19
TMEM178A
RAB43
HSPE1-MOB4
HSPE1
HSPD1
RABL3
GTF2E1
PSMA5
MANEA
HSD17B11
PSMD1
NUDC
NR0B2
CCDC93
KLF7
ZNF362
CLDN19
PTPRN
WDFY3
HMGCS1
MTARC1
UBR4
N4BP2
SNTG2
ATXN1
PPP1R12B
UBE2T
GMNN
PHC2
PHACTR4
TTC31
CCDC142
VANGL1
FAM110C
DHRS3
TSEN2
COL8A1
ATP1A2
TMCO1
HEXB
KCNJ10
ZFR
EOMES
LRRC1
GCLC
C1orf174
DENND2C
PLEKHG5
TFDP2
TESK2
MMACHC
GSTM4
CERS2
GALE
EXOC1
RWDD3
LYPLA2
AHI1
LHX4
ZBTB8OS
RBBP4
RAB17
ZFP36L2
LY75-CD302
LY75
METTL8
DCAF17
EIF4EBP3
SRA1
IL17B
GAL3ST2
FYB2
BTN3A2
MYO1G
TP53I3
SF3B6
FAM228B
SHPRH
MEF2C
RGL1
ARPC5
ALCAM
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
EDEM1
AK2
PJA2
EFCAB14
RNF220
HADHB
HADHA
LRIG2
ACOX2
PPIP5K2
COL21A1
TPM3
FASTKD1
MIA3
C2orf88
IGF2BP2
FAM200B
LAMTOR5
CD34
GOLPH3
INAVA
UBA6
TSN
SYNGAP1
PHF1
CUTA
AMER3
TNIP1
POMC
FOXD3
PRR3
GNL1
GFM1
RSPH10B2
RSPH10B
PCDH1
FAM131C
XPR1
TMEM17
OTULIN
FAM193B
MSH5
DDAH2
CLIC1
CMC1
TINAGL1
CERKL
SYNCRIP
PIK3R1
CTTNBP2NL
UMPS
DISP3
SELENOP
UFL1
S100A2
APOB
SLC38A3
GNAT1
PHF7
BAP1
IFFO2
FTCDNL1
CRYBG1
ZNF687
FAM120B
DLL1
PPEF2
FIGN
CADPS
CSF1R
THAP9
SEC31A
PER2
NFXL1
HUS1
ODF2L
LARP1
VGLL3
GPA33
TMEM184A
ACSL1
MPC2
DCAF6
RBMXL1
KYAT3
ARHGEF10L
TWF2
PPM1M
CFAP91
AGXT
ZFAND3
CFAP65
CDC5L
TNIK
LGR6
NEK7
ARL5A
TMEM63A
LEFTY1
DCHS2
RREB1
FAM78B
EHHADH
SMIM12
MXRA8
DVL1
FAAP20
VAV3
SIAH2
SLC6A19
RPP40
EIF1B
GNAT2
AMPD2
RBSN
LAPTM4A
KHDRBS1
NDUFS6
MRPL36
PKDCC
MUC20
PRSS56
CHRND
DLG1
CLSPN
RFESD
PDLIM7
TRDN
FBN2
ST3GAL6
SLC25A24
PDE7B
FRG2C
PEF1
B4GALT4
TMEM192
EHBP1
CEP43
SLC22A2
LNP1
TOMM70
MME
ARHGAP31
GIPC2
SMLR1
CGN
B3GNT2
OR2T1
RAPGEF4
IFIH1
GCA
CCN2
DKK2
C1orf53
KANK4
LHX9
SEC13
TMBIM1
SOS1
SH3BGRL2
NAB1
VAMP8
VAMP5
UROC1
CHST13
WIPF1
BSDC1
SESN1
CEP57L1
PDGFRA
ZNF124
TMEM150A
RNF181
USP39
C2orf68
XYLB
ZNF827
VARS2
GTF2H4
LMNA
MEX3A
MAST4
C3orf52
ANTXR2
LEFTY2
IL6
C1orf210
KIAA1522
TMEM125
PDE4DIP
ALDH5A1
GPLD1
LMX1A
PABPC4
EIF4G1
EPHB1
IGF2BP3
SLC16A14
GGCX
TIA1
PCYOX1
TMEM144
TNXB
ATF6B
SNX7
CCM2
SEL1L3
IPP
C1orf115
OCIAD2
AGPS
MAP3K4
APEH
NDUFS1
EEF1B2
TRIP12
FBXO36
KCNK17
KCNK16
TCOF1
SLC40A1
MTHFD1L
LRIG1
ATP2B4
RIPK1
C1QB
SLC9A3
TTC39A
MAD2L2
FBXO6
PNKD
GPBAR1
AAMP
AP5Z1
CAPN11
ZBTB48
INTS7
DTL
PPP1R10
MRPS18B
ATAT1
AGTRAP
NCEH1
TAF9
RAD17
AK6
SATB2
TAF11
ANKS1A
DPPA4
RNF5
AGPAT1
AGER
IL18R1
FSTL4
UCP1
TBCCD1
DNAJB11
SELENOI
ADGRF3
KIAA0754
CMTM8
ITPR1
ZNF300
SERINC5
HLA-A
NIPAL1
CNGA1
ETV3
OTUD4
INPP4B
SPRR2D
SPRR1B
SCOC
RBM8A
PEX11B
H2BC18
PXDN
LPP
ANXA9
PUSL1
ACAP3
ETFDH
C4orf46
ITGB6
HESX1
NID1
ADAT2
PEX3
EML6
ETNPPL
TUSC2
HYAL2
MTMR11
USP37
CNOT9
SOCS5
PDZK1
FAM71B
PAX7
SLC30A1
SPRY4
RUVBL1
CTNNB1
SOD2
STX18
KLHL23
ADAMTS9
FABP7
EFHD1
NGF
CD244
TMIGD3
TIGD4
ARFIP1
ADORA3
TUBB2A
MEGF10
GMCL1
ZIC4
TRABD2A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
METTL24
NAA50
ATP6V1A
TBX18
URGCP-MRPS24
URGCP
FCGR1A
CRYBA2
SACM1L
CLASP1
IQSEC1
RAP1GAP
INPP5B
ABRACL
TTYH3
SLC22A3
ELF3
AOX1
SLC25A4
PPP2R2B
GRIK2
SEPSECS
PDE1A
SLAMF1
SEC16B
ZDHHC19
SLC51A
MAIP1
FOXJ3
BMP8B
SDC1
RPL34
MSL2
KIFAP3
NFIA
SHROOM1
FAT4
BLOC1S5
TMCO2
RPS6KA1
CFAP299
ERMN
PLPPR4
GLYCTK
RARS2
ORC3
SLC2A9
UBE3D
DOP1A
LY6G5C
HIVEP1
RIPOR2
CPNE5
RABGAP1L
RBM15
BZW2
ANKMY2
COBL
ABCA4
CREB1
LARP1B
SFXN5
OXCT2
RGPD6
MICAL1
RMDN2
KCNAB2
SOX13
NICN1
AMT
IRF2
CCDC181
PUS10
PEX13
H3C7
H2BC9
DNASE1L3
PLSCR1
CHN2
MAN1A1
RAD54L
SLC35A3
UTS2B
CCDC50
SYT6
TRIM15
TRIM10
CLPSL1
CLPS
OXTR
COPB2
ACAT2
GOLGA4
NQO2
MTRR
FASTKD3
RPP14
HTD2
MIA2
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
PHF12
NSMCE1
PAOX
ECHS1
MAMDC2
CSTF1
AURKA
ERBB3
EPS8L2
DEAF1
MVP
PTP4A1
KDM6B
SPTBN4
HNF1A
SLC9A3R1
SPON1
PGAP3
ERBB2
HMOX1
ATXN7L1
SLCO4A1
MTRNR2L8
VTN
SEBOX
SARM1
KNL1
TMEM169
PECR
POLR2E
GPX4
SCAF11
KIF5C
MTRNR2L2
MSH3
DHFR
ZFP36
SLC7A7
PDXP
CCL20
SLCO2B1
LASP1
SIRT7
TACR2
DNAJC25-GNG10
DNAJC25
IRF2BP2
GET1
CXCL17
MYRF
ARHGEF39
MIDEAS
RIPK4
RAPGEF1
AGPAT2
NUMB
RGPD2
RGPD1
PLEKHG2
SCRT2
NPB
PANK1
PCNX3
MAP3K11
ZMIZ1
NR1I3
PPP5D1
CALM3
PCYT2
CCDC90B
GPR35
SIT1
CCDC107
DOCK6
TM4SF1
MORC1
NCS1
LOC390877
GTF2F1
KIF21A
GPR171
CDK3
SMPDL3A
PPP2CB
GNAZ
DIDO1
PABPN1
WDR74
STX5
ACSL5
ZSWIM1
SPATA25
NEURL2
CTSA
USP2
CLIP2
IST1
CPLX2
ARHGAP27
PLAUR
LHPP
METTL7B
ATE1
PHETA1
PRR15L
USP18
PHLDB3
ZNF567
GGT1
LENG8
NRL
DCAF11
SLC20A1
SMAD3
B3GLCT
CREB3L3
AHCY
AFF1
DUX4
ACY3
GUCA1B
SLC7A5
PRKAG2
CDC14B
SLC3A2
SULT2B1
ABLIM1
SEC23A
EPS8L3
NMD3
AP1M1
SLC19A3
PAF1
MED29
SRCIN1
DNAJC22
TULP2
NUCB1
CARHSP1
CDH17
CSNK1D
TP53I13
ABHD15
FUT5
IDH1
TSC22D1
IL6ST
LOC100509620
F11R
RAB37
EPS8
CNDP1
LOC102723996
ICOSLG
WSB2
APOC3
AKR1A1
LIMK2
HNMT
SLC35D2
GPRC5C
C1QTNF1
LGALS4
PRUNE1
MINDY1
PLEKHG6
IDNK
CAB39
SNRPD3
GUCD1
DENND2B
BRMS1
B4GAT1
NOMO3
ABCC6
NCOA4
TRIB3
APOA1
IGSF23
IL20RB
ITPK1
FN3K
DOCK5
CDR2
CYP17A1
PDF
AJUBA
F10
BPHL
COLCA2
WEE1
CAMK2G
GAB1
AHSG
TPCN2
ZNF219
TMEM253
CDHR2
TDP2
MYD88
ACOT13
ACAA1
INPP1
ASS1
PRKCSH
CCDC151
SYBU
GSE1
SFXN3
PDZD7
PLOD1
ID1
ARL14
FBXO31
PPIL2
TIGD3
GDF7
AQP11
FCHO2
DENND5B
CERK
FTH1
BCL9L
CFLAR
RABGGTB
SUCLA2
NR1D1
SDCBP2
CCL16
GLRX
SPATA2
PLXNB2
GTF2I
STK24
TRAF7
RAB26
RGS3
POLD4
HDHD3
NQO1
COMT
CCND2
BORCS7
SEPTIN4
KIAA2013
PET117
KAT14
CA9
PDLIM2
LAMB1
CBSL
CBS
WFDC9
WFDC10A
ZC3H12D
LSM1
SPAAR
HRCT1
SCARB1
ANKS4B
SLC45A4
BCAR1
POR
AFP
GDI2
KRTAP5-6
TDRD7
C19orf33
FAM110B
TRIM48
SPHK2
PAAF1
DAND5
COA4
GIMAP5
TCIRG1
NDUFS8
LURAP1L
MRPL2
KLC4
CUL7
TK1
AFMID
NDUFA6
MYO18A
FNDC11
TCP10L
SMARCD1
ASIC1
KIF1C
INCA1
KRTAP5-7
CTDSP1
PTK6
DBP
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
LIPE
ATP7B
ALG11
RAB5IF
PTDSS2
KLHDC2
ANO9
APOA4
GPR142
ALOX12B
CORO1C
MLXIPL
VPS25
PTPRF
BRCA1
BAG4
SEC24D
IQANK1
FAM83H
CBY3
PTK2B
EHD1
MIDN
WNK4
REG4
S100A16
S100A14
ABCC3
SH3GL1
SP1
ADAP1
SNRPA
C19orf54
HGD
GDF15
MAN2C1
GJB1
AGT
IQGAP2
IL32
RNF44
CFB
SMIM19
SLC20A2
MTRNR2L1
CYB5R3
ATP5MGL
NOMO1
ZNF232
USP6
PLEKHB2
FAM168B
TJP3
GNAL
CHMP1B
WAS
PPP1R27
MCRIP1
FAM107B
PTPRN2
CXADR
SRMS
TBC1D22A
SECTM1
GSDMD
B3GNT3
KDELR2
IFNGR1
FUOM
GAL3ST1
MRPL24
TKFC
DDB1
HIC2
NIBAN2
NEK4
ITIH1
PTK7
C11orf24
HDGF
CARM1
ZNF764
TAS2R19
SPG7
LIME1
GNG4
MBNL2
STAT6
ZBED9
LRP1
PRDM10
GAPDH
TRIM47
CPNE7
PON2
PALM3