ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957410 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◣ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

SKIL
COL7A1
FSTL3
COPS8
SERPINE1
H2BC21
H2AC20
PRKAB2
CHD1L
KCTD11
SPACA6
OLFM2
IL20
TRIOBP
PPP1R13L
POLR1G
ZNF341
WBP1L
PMEPA1
OTUD7B
TNFRSF12A
RNF103
SMAD7
MTHFD1L
KRT80
SDHAF1
MTIF2
WDR74
SIRT1
MED13L
MRPL2
KLC4
EP400
TAGLN2
GCNT1
ZNF148
RBPJ
SLC35E1
USP30
USP22
AXL
SLC44A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UAP1
FBRS
SNX16
ACOX3
CCDC88A
DCAF10
SLC39A13
WWC2
LIF
TGIF1
PAFAH1B1
GNB2
SH3PXD2A
WDTC1
PEX3
ADAT2
MANF
H2BC18
MYRF
PDPK1
ZNF592
SLC46A3
VDAC1
BHLHE40
SH2D7
UBAC1
DMTF1
GBA
VDAC2
PURA
ERCC1
HNRNPUL1
ZNF34
ITCH
NUAK1
MXRA5
KMT2A
BMPR2
GALNT2
BRWD1
ID1
UBE2B
CDKL3
MAP2K3
MSH3
DHFR
HSDL1
DNAAF1
CLCF1
ZMIZ2
GZF1
HTRA1
ERG
SCAF11
KANK1
RCOR3
TMEM222
ZNF697
BCAR1
BACH1
KLF10
YY1
SAMD1
RASSF7
LMNTD2
ABLIM1
IPPK
UBE2D2
GATAD2B
NDUFS7
CTNNA1
POLD4
HABP4
NUTF2
CENPT
USP47
ADAM17
GATAD1
HECTD2
S100A2
PHF13
KAT6A
LTBP3
MTRNR2L2
TUBG1
RETREG3
DLX3
MTRNR2L8
NODAL
CCDC92
GAB1
TRIB1
TTC39B
CMTM6
THEM4
IKZF5
ACADSB
ME3
PRRG2
NOSIP
PPP1R12B
ICAM2
TOGARAM1
KLHL28
BRD7
INSYN2A
MTRNR2L9
RICTOR
CCPG1
C15orf65
MYADM
PAX6
FAM172A
STAM2
NFKBIL1
ATP6V1G2
FMN1
LEFTY1
CST6
CCDC33
RASGRP3
SMARCD3
MMP10
CENPA
CTCF
PSMD2
TMEM263
PEDS1-UBE2V1
PEDS1
PELO
ITGA1
SNX25
FDXACB1
C11orf1
EPB41
CAV1
KDSR
FGF8
KCNN3
SNX18
FLRT2
ZNF571
ZNF540
LAMB3
DHRS3
COQ8B
DERL3
ALDH18A1
DISP1
TNRC6B
STOX2
TECR
DNAJB1
LRRC2
TMTC4
RRM1
NPFFR2
IVNS1ABP
CHRNA9
INPP4B
SARAF
TMCO2
SLC25A25
NAIF1
BRAP
ACAD10
NFIC
SERTAD4
PLK3
JMJD1C
WDR36
H2BC11
H2AC11
SIAH1
BET1
LAMC2
DGAT2
ELAPOR2
ILKAP
SLC35F2
CER1
CXCR5
ZFR
AHCYL1
FAM118A
CTNNB1
PSKH1
VWA5B2
ZNRF3
ZNF609
ITPRIP
SERPINB8
NOL4L
LUC7L2
DNAJB4
CSF2RB
PANK2
KLRD1
MFNG
METTL11B
SPON2
MACIR
CNOT1
BRIX1
SP4
SLC9A1
RNF223
CDKN2AIP
CPT2
LAPTM5
PGK1
TFPI
IL17B
DDAH1
HSD17B8
UPK3BL2
SLC1A4
LENG8
PRMT5
ZZZ3
TBC1D7-LOC100130357
TBC1D7
EPSTI1
ASB8
ARHGAP24
GPR183
LOX
GADD45G
AMPD3
ZBED2
PIM1
FCHSD2
DENND2B
CPNE2
VOPP1
USPL1
HMGB1
NOTCH3
CXADR
FOXJ3
ACSS3
JCAD
BLOC1S2
LPCAT3
ZNF655
KCNF1
LEMD3
CD8A
KRTAP21-3
HNRNPA2B1
GAS2L1
CBX3
LRP12
HSP90AB1
PRRT2
SLC2A14
LRP6
UQCRB
GTF2B
UPK3BL1
TSPAN12
IL6
LRRC37A3
AQP3
MYOM1
OVCA2
ZC3H6
NUF2
NTMT1
SOWAHC
SEPTIN10
MLLT11
CDC42SE1
IFRD2
SGK1
MRI1
BAMBI
REV3L
HERPUD2
H4C12
LOC100287896
LIPT2
BEGAIN
PCK2
RET
AFF1
PLEC
PITPNM3
CALM2
FEM1C
CCN1
KANSL1L
H4C11
EIF4E
DRAP1
C11orf68
DST
SHKBP1
SLC38A9
MINPP1
MED23
GEMIN7
SLC20A1
SNX14
SLC25A45
NEDD4L
AGBL2
TTLL8
CCNI
KPNA7
DOCK9
ALOX5AP
TBC1D5
NEDD9
KBTBD2
TIPARP
HRH1
ZBTB5
PRC1
FLNC
RCAN3
B4GALT7
AGXT2
ENOX1
DSTYK
PPP2R2A
MTF2
SLCO5A1
MIXL1
SEC24B
GNL2
RHOB
RNF213
PPP6R1
TTC9
F13A1
GRIA4
FAM168B
CHST11
ZNF853
DNAJB14
TP53TG5
ZBTB45
ZSWIM4
PARL
GSK3B
ARHGAP28
DENR
USP53
RRM2B
PRDX1
P2RY2
NR2C2
CAMSAP2
RHOBTB2
DECR1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NIBAN2
CAPS2
TEAD4
NPAS4
LARS2
TRPC1
NFAT5
BUD13
MTHFD2
NOCT
LMO4
KMT5B
ANGPT2
DNAJA1
BPTF
APTX
TTF1
MAST2
HNRNPD
ADGRF2
GNAL
SSBP2
NINJ1
ZSWIM7
TTC19
MROH6
RAI1
GUCA2A
STAT5B
CDC37L1
ATAD2
RNF32
H1-2
GLUL
VANGL2
R3HDML
IL21R
TFF1
XPO1
LDLRAD4
CSF1R
CDHR3
MARCHF3
BMP8B
RUNX1
PAWR
TNPO1
CLSPN
YOD1
QPCT
GRIK2
CCN2
SPRR1B
ACTBL2
USP42
ZNF354A
SEMA3E
FAM184A
CREB5
SYT14
CHN1
CALD1
UNKL
MIPOL1
H3C15
H3C14
TMEM242
MCL1
MAP7
H4C14
CLTC
TM2D1
RBMS1
MARCHF5
H4C3
CPEB3
PDE4DIP
PXK
KMT2E
FXR1
FERMT1
TMEM184A
MSANTD3
H4C15
CPA4
TTC6
MYLIP
MOB4
FOXA1
PSRC1
BAZ2B
SPTAN1
MAT2A
CALM1
RIN1
SKP1
SH3BP4
FABP6
ZNF48
CYB561
TDGF1
SLC19A2
RAD23A
ADAM19
DNAJC28
BMP8A
ZRSR2
ZNF641
PIK3R3
OCIAD2
DCP1A
SYN2
PALLD
COQ10B
ZNF587B
TNFSF4
RCBTB2
FAM53C
CDC25C
CLSTN1
TM6SF1
RXRG
PTGS2
ARIH2
GLRA3
ANKRD46
TMIE
ESM1
C2CD2
AMOTL2
ALS2CL
STK40
SETD5
IFRD1
FLVCR2
DNAJB2
RPL24
LRCH4
FBXO24
CYP3A5
ADGRG1
ACVR2A
PSMD10
LIMK2
ATG4A
UBN2
PTPRD
ACOT7
TRAK1
NSUN6
TCTEX1D4
NDUFAB1
CCNL1
KRT16
ID4
NOTCH2
HPCAL1
CCDC50
UBL4A
STK17A
RAPH1
LRRC59
KLF7
EML1
APOL3
SRSF7
PNMA1
FILIP1L
PCSK1
LAMA3
EIF2AK3
TLE2
PDPR
THRB
PKHD1L1
SRSF3
PTEN
KLLN
ZSCAN22
PLPPR3
NR1H3
ACP2
SMAP1
PRKRA
PJVK
BCL9L
ITGAV
HNRNPH1
DNAJC6
PMAIP1
NDST1
NASP
IL13RA1
ZCWPW1
STX4
RABEP1
PTPN18
MET
MEPCE
S100A13
GRM1
CHTOP
ARL4A
UBXN8
GPR180
E2F3
DDN
SMIM8
RELA
RAPGEF2
PCCA
LOC107986453
JUN
DDX59
CKM
ARID5B
ANKRD17
TBX22
SLC7A6
ARAP2
SYTL2
KIF27
BOD1L1
SREK1
SLC39A10
RUNX1T1
PDE2A
MAML3
DMPK
COPS7B
ATXN7L2
ARL15
FAM168A
ARF4
PCDHGC5
HTR5A
SERPINB6
ISCA1
FN1
DENND6A
TRDMT1
PPP1R14B
MDFI
KDM4A
HINT3
H4C5
ZC3H7B
RANGAP1
NFIA
NEDD4
IMMT
TTI2
PAXBP1
H3C6
DLC1
C3orf52
SLITRK3
PFKFB3
NR1D1
IER5L
GPR68
ZFYVE16
LGR5
JDP2
RGPD8
RGPD6
RGPD5
IL17RD
EEF1A1
DMXL2
DET1
BAZ2A
XKR7
WDFY1
VIM
ADPGK
SNX30
SECISBP2
POLR3D
KHK
H2AZ1
H2AC19
H2AC18
ACSM4
TMEM183B
RAB23
NCOA3
MYLK3
DDX1
ZNF521
ZFAND5
SPAG9
HOXA2
ZFAND2B
USP15
LDHA
KDM1A
GSN
TRMT112
PRND
PRDX5
SLC34A2
SAR1B
HSPA1B
H2BC17
H2AC17
AASDH
S100A10
LARP1
KRTAP2-4
RAD54L2
PCDHAC1
CYP19A1
ACTB
CYP2S1
SLC35E3
SFT2D3
RRP8
MTDH
ILK
ENKUR
DEPP1
ASCC3
ZBTB37
KDM5B
FGF1
FBXL12
C4orf36
TGOLN2
SRF
SERP1
LSM14A
EIF2A
CBWD6
CBWD5
CBWD3
UBL3
RPL5
MTRNR2L6
MARCHF4
FAM227B
DTWD1
CSRNP1
TLCD5
NYAP1
MMP24OS
MMP24-AS1-EDEM2
MECOM
KDM5C
ATP2A2
SMPD4
SMIM14
MZT2B
MRPL39
IQSEC3
GGT7
APOBEC3D
AMOTL1
TRA2B
RPS20
POMZP3
PBX2
PABPC1
NRSN1
MFSD12
GTF2H2
RNF11
PPT1
IGF2BP3
FAM162A
CCDC58
TRA2A
REEP5
NDRG1
NAGK
MEX3B
MCOLN1
ACTL6A
TMC7
SRI
RSU1
PLEKHA8
MAK16
KPNA1
H2BC8
H2AC8
FRA10AC1
FKBP14
CENPC
XPO5
SESN2
POLH
NFYC
NCOA5
H2AX
SLC25A51
PPIA
UBR4
TRIP10
TMEM121B
SYNRG
SYNJ1
REST
RBP5
H1-4
C9orf40
UBE2D3
H3C2
YWHAQ
SYT12
SELENOO
RGS4
PPCDC
NABP1
MNAT1
HSPA5
BDH1
WDR1
TCEAL8
RNF6
MFAP3L
IER5
AVPR1B
ZNF225
PTPN14
IFT52
CORO6
APOBEC3F
TMEM215
LRCH1
E2F2
ZNF326
USP37
SULT2B1
SLC24A2
SFPQ
RNF44
NMRAL1
HMOX2
H2BC5
ERLEC1
CPNE4
CNOT9
CLDN4
ASB3
ACSL3
ZNF764
ZNF395
TBPL1
SLC16A1
MYO6
KLHL18
KIF9
H2BC12
H2AC12
ERI1
ZNF664-RFLNA
ZNF664
USP48
STX16
SLC4A2
SH3BGR
HDAC4
CDKN2AIPNL
CDK5
ZNF839
SPSB2
PRSS23
MICALCL
KIT
KCNMA1
EXOC2
ELF2
DUSP1
CHST13
APOBEC3G
TMEM250
S100A1
PPIL3
PIGO
NIF3L1
CAP1
ACVR1
ZNF644
PTBP2
PPP1R10
POLE3
PDE1C
MRPS18B
FURIN
DCTN2
CEMIP2
CCNG1
C9orf43
AGO3
PPP1R21
HEXB
GTF2H2C
GTF2H2C_2
FOSL2
EXD1
ERBIN
DNAJC25-GNG10
DNAJC25
CNN3
CHP1
CERCAM
ARHGAP26
MDC1
H2BC15
H2AC15
EIF2B2
CCNH
ZDHHC23
TUFT1
TSC22D2
RTN4
RPS9
PPIH
GARS1
NTSR2
LOC728392
HTR1E
EIF4A2
CRBN
CPVL
ZCWPW2
UFL1
TRUB2
TAF8
MTHFR
METAP2
MEFV
HSPH1
ERMP1
DDIT4
COQ4
CLCN6
AZI2
ABCB11
MYC
SEC22A
RPS12
KIAA1841
ANKRD18A
ZSCAN31
PIEZO1
LOC388282
ITGB1
HDAC2
ANKRD1
UBE2S
TES
RWDD1
MRM3
MAP3K2
ID2
GLOD4
GADD45B
EFHD1
ZNHIT1
TMEM132A
PLOD3
KLF17
HMGA1
ANKFY1
VCP
SOCS2
SLIT2
POLR3E
ITPKC
GSTT2B
GSTT2
FAM3C
DESI2
DDT
CLDN6
AAR2
TMEM170A
SHF
SETD6
NCBP3
LAYN
FCHO2
CFAP161
CELSR3
B3GLCT
ATP23
ZNF821
ULK2
TP53INP1