ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

NRARP
SMCO1
MAMDC2
PYCR2
HES1
PAMR1
MBNL1
NDUFB5
MRPL47
SOX2
CAPNS2
LMCD1
VWCE
NAV2
FJX1
GRK6
PCCA
LYRM1
DCUN1D3
MTF2
RFLNA
ABCC1
ARSG
F11R
EVA1A
TES
TNRC18
LOC100129484
GADD45G
LCLAT1
LIMK2
ZNF775
PTMA
VIT
HMGB1
MED25
FUZ
CYP1A1
NWD1
ZNF341
PSPH
CCT6A
CDC42EP3
ITGB4
FAM227A
CBY1
SLC20A2
KMT2B
MANSC1
SYT2
ANXA11
HGS
ARL16
HERPUD2
EPB41L1
PLPP2
RAG2
IFTAP
ARID2
CNP
ARID5B
JMJD7-PLA2G4B
JMJD7
NFE2L2
FGD3
UNC13B
NOTCH1
MEOX1
WDR74
SH3PXD2A
NME1
ETV1
DDX17
CEP41
CYP2S1
FBXO27
PPP3R1
DST
WDFY2
TRMT2A
RANBP1
CYP21A2
C1QTNF7
PHF5A
ACO2
PXMP4
CEMIP
RNF13
JUP
TMEM17
ADH7
ZBTB34
IGFBP2
ABCC10
SCPEP1
SPDL1
ST6GALNAC2
MMP10
TMEM132A
LAMP1
SMAP1
IQCH
AAGAB
OGN
ETV4
NDE1
MARF1
IKBKB
SERPIND1
SMCO2
ZSCAN2
HOPX
PER2
UBTD2
IFRD1
IFT80
MNT
CUEDC1
TPM1
SMC4
SAR1B
NFIB
NIBAN2
PLD1
SEM1
NINJ2
MARCKS
SUN1
PIGX
CEP19
SLC25A25
KDM5B
AADAC
KCNN2
PHACTR2
SLC7A5
PPDPF
CLDN4
ABHD11
SIX2
SEMA3D
DDX5
CEP95
NUP153
MTMR1
KIF14
ABCC2
SPAST
EHF
LFNG
DGKH
SNRPE
FIGNL1
IER3IP1
TUT7
HDAC9
EXT1
MMP11
LGALS7
NAA35
DENND4A
ZFAND3
POLR2M
MS4A2
CCT2
GALNT11
ADGRL1
THG1L
SMARCA2
DHX8
MAST4
LPP
CSTA
BST1
SHF
ESYT2
NRCAM
MCCC1
TUBA1C
YEATS2
OGA
NKIRAS1
NR1D2
ALG9
PTCHD4
KCNJ15
FOXP1
P2RY12
CCDC200
DAGLB
CHST12
GSTO1
ZNF608
GGH
BFSP1
SAPCD2
UAP1L1
RNF152
MMP13
VDAC2
ATAT1
TMUB2
SMARCAD1
KRT74
CAPRIN1
KRTAP3-1
KLHL6
ONECUT2
GPR87
ADAM28
UNK
H3-3B
BAHCC1
MUS81
CFL1
VGF
NPIPB12
TRPV4
C20orf96
TP53AIP1
RPL27
RBM39
KIAA0040
SPIN1
C3orf20
OTOGL
EIF4A2
LAPTM4B
SPTSSA
FGF1
PLEKHG1
GET3
CCL26
HMGN1
IL1F10
OR7A10
TJP2
NTN5
NELFCD
SYNCRIP
EFNB2
SH3BP4
TRMT1
NACC1
PMEPA1
PRKAB2
CLSPN
VEZT
FGD6
CTTNBP2NL
TMX2
MED19
FMN1
N4BP1
LDLRAD3
CHD6
RAPGEFL1
CDH13
EGFR
DLX5
ETFB
ABLIM1
BAG3
LAMTOR4
KIF21B
CPN1
MSANTD4
GDF5
CEP250
MUC20
CLNS1A
ZFC3H1
THAP2
ECT2
SLC9A9
POLB
ACTR2
LCE3A
SLC7A11
UBALD2
CTXN3
ETV5
ISL2
CLUAP1
CDIN1
NPIPB8
GRAMD1C
COL23A1
ESRRA
CATSPERZ
ADRM1
H4C3
H1-6
KRT13
ITPKB
TAL2
RAPGEF5
DGLUCY
ETF1
TNFAIP8
KDM2A
SCNN1A
LTBR
SOST
CHMP4B
FNIP2
KRT15
SLC6A2
DUX4
ID3
DMRTA2
PIN4
TCF12
MCM7
AP4M1
MTRNR2L8
ARHGEF19
GGT1
GSN
CRISPLD1
SNAPC3
VRK2
SPRED2
IQGAP1
MTHFD1L
RABGAP1
MEF2C
ZNF277
DOCK4
OSCP1
CERS3
RIMKLB
ALDH3A1
ZBTB40
KLHL5
TMEM254
TJP1
PELO
ITGA1
LNX1
HNRNPUL1
PALMD
GPAT4
SFR1
MTUS1
TP63
CASD1
SPRY4
RNF43
TSKS
AP2A1
POLR3E
RBBP9
STK31
DSC2
UFD1
CDC45
SPO11
NPIPB13
DNAJB1
KMT5A
TECR
SFXN1
CELA3B
RBM47
LTBP2
GNA13
ESRP1
SPTLC2
FAM83G
IL1A
PDIA4
BCO1
TIA1
CCDC43
HLTF
EHD4
HBP1
CC2D1B
COL7A1
TPST2
ABTB2
SCOC
PROSER1
NHLRC3
LOC100505841
AMN1
COA6
TGIF1
KIAA1549
SLC25A11
RNF167
STARD7
BCL2L13
ATP6V1E1
STON1-GTF2A1L
STON1
CAV1
RTP1
ALDH7A1
PHAX
ZMIZ2
ENAM
TUT1
SACS
NES
PIPOX
CDX2
METTL11B
SOX6
LRRN1
DNMBP
MUC1
REST
AGO1
OTX2
CACHD1
ARHGEF38
SOCS3
WFDC8
DNMT3B
MUC3A
TMPRSS11E
OR5AR1
ZFHX3
PPBP
PF4
NRG1
FIGNL2
DUSP6
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
SFRP2
ZNF483
ANKRD1
CD99L2
TCF7L1
SLTM
SNRPN
MOBP
BTG2
FGD4
USP44
TRIM48
TALDO1
RIIAD1
PPP1R16B
SHCBP1L
EDDM3B
FLAD1
HES3
FAM222B
MTRNR2L1
ICMT
PHC1
GIMAP5
SAMHD1
GXYLT2
MTRNR2L2
MSH3
DHFR
PDPN
RCN1
PRICKLE1
OBI1
TMCC1
ITPRIP
DHX32
CELF3
SRRM4
SNX16
HESX1
GAD2
GOLGA6D
FGFR2
GPSM3
VCAN
TMEM47
PARP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
LZTS1
ZNF398
POSTN
TDGF1
NADK
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
MFSD4B
ECE1
RFX4
FBXW11
FZR1
MTM1
PSMD9
HPD
CAMTA1
PGPEP1
MRPL20
PLAGL1
FAM120B
ZSWIM3
ACOT8
TIMP4
TBC1D16
SCGB3A2
SHISA5
CHN2
DDR1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
LIMCH1
RASGRF2
GJA1
TMEM41B
KCNJ1
PSIP1
SOX14
FBXL19
ST18
MAD2L2
DRAXIN
TTYH1
HBG2
FRAT2
C1orf127
POU5F1
GPC4
IER5L
SOX5
SELPLG
FBXO40
ZNF343
SASH1
ZSCAN10
DOK7
OSBPL1A
FZD8
MED12
GOLGA6B
OR2T1
NDUFS5
SCAF4
NDST1
HHIP
BEND3
RASAL2
APOBEC3F
KIFBP
CYTH2
FGF2
CTNND2
RASA1
MYCL
GDF3
HMOX1
FAM180A
RBFOX2
CELF4
ARIH1
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
MDN1
ETS1
PDCL
ACVR1
SLC35A5
ATG3
UTF1
DICER1
TRIB2
PEAK1
HMG20A
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
RTN4
OLFML3
PRR15
LINGO1
CDC14B
PLEKHB1
SPHK1
ZNF436
MYSM1
TUBB
MDC1
SRSF7
IL34
REV3L
SLC39A8
PCBP1
TOMM40
PYGB
LEFTY2
KDM2B
C1orf198
GNAI2
DTNA
ADAR
CCN2
CER1
C8orf58
PGK1
EPHB3
SYN3
DHDDS
SLA2
FOXD1
SGMS2
ADA2
SRCIN1
TESK2
L1TD1
ZNF304
LYPD6B
PRDM14
NECTIN1
LRAT
MAP6
LRTM1
DDX43
MMACHC
KDM3A
ZNF532
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
KLF3
CSF2RB
DLL1
PCYT1B
CHFR
HES5
ZNF296
PANK4
GEMIN7
FRG2C
CXADR
NPSR1
ANKRD6
PUF60
AEBP2
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
RGPD1
DACT3
FAM181A
SLC10A2
ZNF195
SRP68
AUH
SALL3
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
GLI2
MRS2
KRT6B
RAX
SLC46A1
LIPK
LRRTM4
PPP2R3A
LHFPL4
LRIG1
ZNF781
IL7R
NXPH2
NDUFV1
TRDMT1
USP7
CACNA2D1
TMC5
CTBP2
ALDH1A2
STOX2
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
RGPD2
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
GABRQ
DHRS3
PDE1B
SLCO5A1
NEBL
BORCS6
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
MOG
VOPP1
ACSL6
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ESX1
TAGLN3
ANKRD40
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
SMPDL3B
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
KRT8
SORT1
G3BP1
ZBTB45
SPATA22
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
FAM24B
GLDC
GCSAM
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
KLF7
DET1
PRSS23
PIK3C2A
PXDC1
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
RNF19A
FRG2
FOXO6
ZFYVE1
ACSL1
TP53
AK4
SHC3
RNASE9
GABRB3
ARID5A
ZNF428
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
PRRC2B
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
SLC16A13
ZNF875
CCL2
UPF1
ZBTB2
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
TTYH2
SAXO1
RRAGA
KCNIP4
ZSCAN9
YIPF4
ARSL
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
EXOSC9
TGIF2-RAB5IF
TGIF2
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
SLC25A36
PHC2
NRXN1
SUCO
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
HSPH1
ZNF552
NATD1
RIF1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
GADD45A
LRRC47
GFRA1
ANAPC15
TNFSF8
DEFB114
DEFB113
LEFTY1
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
PAN2
IL23A
NUP160
CNN3
PAK1
DLST
TLE3
RTBDN
MAST1
FZD5
DENR
CD2BP2
MEIS2
PRR5L
NEDD9
IFI16
ANP32A
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
MVB12A
RARB
SH3GL3
RAB30
COPZ1
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
GSAP
RAB36
FZD7
TFE3
SLC2A10
CRB2
TRIT1
BBC3
TLE1
CDC25A
DTX2
GRHL2
ZMAT2
PDHA2
YAF2
WDR36
TIAL1
THRB
NIPAL1
RNF186
PES1
ZNF254
AHCYL2
SPATA12
HOXB1
DPP3
UBAP2
TFDP2
CUBN
AKIRIN2
ZNF358
PKNOX2
MEX3D