ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX682379 | TSU-1621MT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ARSG
INAFM2
PARK7
CCDC88A
ARID5A
GRHL3
DIAPH1
USP15
CCPG1
C15orf65
POR
SLCO4C1
IQCH
AAGAB
SPATC1L
RASSF2
C11orf24
MRPL34
PPIB
NDUFA4
MTMR4
TRAF4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NDFIP2
BIN2
SLC9A1
WNT10B
PLEKHO2
KAZALD1
CYCS
ZCCHC3
FGR
SKIV2L
NELFE
KCTD6
ADCY7
MRPL38
RNF149
LNPEP
NBEAL2
NBPF1
IFRD2
KCNAB2
TMEM222
SRPRA
SH3BP2
RASSF5
SNX3
HEBP2
TRMT6
MCM8
MRPS24
DYNLL1
MAP2K1
FAM110A
TBRG4
FAF2
MTCH1
JAK3
THRAP3
SNAPC3
CCDC114
SSX2IP
CDCA7L
ZNF76
SLC39A13
SLC35E2B
ATP23
RWDD2A
PGM3
GPR108
DUSP6
NOTCH2
TRERF1
DGAT2
POLR2J3
VAV1
PEX3
ADAT2
PRKDC
MCM4
SLC35E2A
CTTN
PIP4P2
C1orf159
ATAD3B
KCNH2
KMT2A
PRDM1
ATG16L2
ZDHHC4
PRDM10
ZNF25
BUD13
TIGD5
EEF1D
VPS37C
RFESD
SH3TC1
RER1
MORN1
NCBP2AS2
NCBP2
USP21
RAD50
ASNS
ATAD3A
CNOT6
RPS6KA1
KIF1C
INCA1
FAM227B
DTWD1
DENND2D
DPP9
TDP2
ACOT13
YY1AP1
DAP3
HPF1
CD164
RNF125
RNF139
UBE2L3
RIMBP3C
RIMBP3B
IL21R
CFD
MAPKBP1
PKM
UBL7
MYCBP2
MRTO4
EMC1
AKIRIN1
PTDSS1
MTERF3
MTMR1
C21orf91
RMND5A
RNF103-CHMP3
LANCL2
RITA1
DDX54
DISP3
ASH1L
HMGCL
MAGEF1
GTF2H3
EIF2B1
CBWD5
CBWD3
DLX2
RXRA
C18orf32
UBIAD1
MAPK6
FNTA
DDX23
CEP135
SBNO2
ZFAND2A
CARMIL1
NOC4L
DDX51
IL6R
GSPT1
TAS1R1
NOL9
ARF3
CLIC4
BRAP
ACAD10
RPS3
FKBP1A
C12orf65
RPL8
CHST11
SEC14L1
ZNF219
TSPAN4
POLR2L
NMNAT1
LZIC
IQGAP2
TMEM65
TKFC
DDB1
PCMT1
RIMBP3
MAPKAPK3
CISH
FAF1
SUPT4H1
TMEM199
POLDIP2
FCHSD2
GALE
DYNC2H1
PPIL4
ZNF318
MRPL20
PDE4D
HYLS1
C6orf89
SNAPC5
PPP4R3B
RCC2
TBL3
PRKAB1
RAC2
NUS1
RBSN
ZBTB17
CLTC
PSMF1
ARF4
RNF216
FOS
CTSC
TMEM41A
TRAM1
MT2A
MAPKAPK5
USP42
SPTBN5
CLN5
RGS14
NDUFV1
CMTR1
BOD1L1
PPP1R8
ZBTB12
STARD3
GARS1
ZNF774
PRR19
PAFAH1B3
ATG101
PRKAG1
CDC42
FXYD2
WDR53
FBXO45
ABCF1
IQSEC1
DTX2
ARHGAP27
IDS
LSM5
AVL9
RCN2
SEC13
USPL1
HMGB1
MT1G
DHDDS
ADPGK
SDE2
EXD1
CHP1
FAM120B
B3GALNT2
RERE
NFKBIA
CBFA2T3
TRNAU1AP
TESMIN
RFC2
RNF19A
GFUS
TAF12
THYN1
ACAD8
TPP2
MCU
ZZZ3
PHF13
ABHD12
ZC3H6
RNF34
HBS1L
FBXL18
EIF3B
DLST
RPLP1
ZFPL1
CDCA5
HUS1
EHD1
EIF1B
TMEM230
CCNL2
PCNA
DHRS4L2
DCP1A
TAF15
RWDD1
SNAP29
PI4KA
SLC35A1
TRIAP1
MESD
RANBP3
GTF2H2C
GTF2H2C_2
ZCCHC4
MC1R
ERMARD
C15orf40
VPS36
PSMD12
UNK
PIK3AP1
PEAK3
CCNL1
GZF1
IGFBP6
HTRA2
TNPO1
FANCE
POLR2J
YTHDF2
SPRY2
ATG5
POLG
ZNF202
REXO1
PSTPIP1
CBWD6
STAT1
FAM76B
CEP57
CRLS1
VPS37A
F2RL3
CNOT7
LAMP1
UGGT2
PPP1R18
SDF4
B3GALT6
MARCHF7
EEF2
RPS6KB2
TCF12
RB1
NCKAP5L
ETFA
INTS1
ADAM17
PGK1
CHAMP1
UBOX5
FASTKD5
RGS16
PGD
DBI
C2orf76
SMIM14
SIRT6
RPS28
NDUFA7
ANKRD24
SCAF1
MFN2
ZNF277
SACM1L
DOCK4
HES1
RMDN3
BRIX1
FRAT2
TAF1B
ARL4A
FDX1
SPDYE14
SPDYE10P
CSRNP2
IMP3
IPP
PSMD6
STK38
SLC43A3
PNRC1
RPL39L
EXOSC10
ARIH1
COMMD1
CCT4
ZNF554
PLAG1
CHCHD7
SOD2
FADS2
FADS1
PKNOX1
CAP1
TXNDC15
DNMT1
LSM2
UBE2K
NREP
SP7
ASB1
RAB1A
LRRC59
CD63
RPL10A
ZNF436
DNAJB2
MSH3
DHFR
SMAP1
C6orf226
MIA2
SF3B2
CNPY3
PURB
ADORA2A
SLC16A6
SYNRG
SNUPN
ARL8B
FOXN2
CCZ1
THOC3
ORMDL3
GTF2H2
PDAP1
BUD31
DDX46
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
LRRC37A3
DSCC1
SYPL1
ATL3
MYL12B
NOC2L
NXF1
MAEA
NSFL1C
CHPF2
STRADA
TMEM39A
GCFC2
COPS8
RPS16
ANKRD36C
TRMT61B
MANF
RMC1
GMCL1
TAF5
F8A3
F8A2
F8A1
RPS15
RNF141
FADD
CYB5R4
AP5Z1
GTF2A2
F8
ZC3H3
TMOD3
DNAJC11
MAPRE2
STAU2
KAT5
GNA13
H1-4
TMEM217
TBC1D22B
AP4E1
CCZ1B
USP32
CHMP7
GPSM3
ACAD9
GET4
DOHH
NFU1
SSR3
WDR27
POLR1F
MTRES1
KAT8
C6orf120
BIRC2
NBN
MAD1L1
MTF2
FAM53C
CDC25C
STX11
FLCN
ZNF593
C1orf232
MTHFD1L
ARPP19
RARS2
ORC3
ME3
PSMD11
KIF23
SPRYD4
CCM2
PHF19
ARID1A
MAN2C1
SPPL2A
CDK11B
CDK11A
ZBTB2
AMACR
RBM15B
SNX17
RPUSD4
MALSU1
FAM118B
EIF2B4
C15orf39
SYNJ1
GPAT3
SELENOW
SDHB
DTNBP1
MALT1
TRMT44
MSANTD2
ACOX3
ZNF451
PGM2
RPL35
CDIPT
ARPC5L
SNX1
ZCWPW2
AZI2
NELFA
METTL23
JMJD6
RTN4
PGLS
GLYCTK
MT1E
MIB2
CFL1
UNC50
COA5
FANCD2
DDX19B
AARS1
SH3BGRL3
TIPARP
FAM91A1
SETX
OSBPL3
WASF2
C5orf51
AURKAIP1
WDR61
ICE2
OST4
PSMD3
IFNGR1
RLF
ZYG11B
MARCHF3
ANKRD13D
FAM133B
MTHFR
CLCN6
P4HB
ANKRD36B
CCDC134
FBXO22
UPF3A
WDTC1
UCHL5
RO60
POLR2M
MYLIP
KATNA1
UBE2Q1
SAXO2
EFL1
TRIM13
TMEM127
RPN2
MROH8
CIAO1
UBA52
LIG4
ABHD13
STMN1
WTAP
TSGA10
ZBTB8OS
RBBP4
LATS1
RNF14
C11orf97
GABPB1
RMDN1
RUNX3
OTULIN
ARHGEF39
CASC3
AP5S1
WDR25
WARS1
ZMAT3
NOP56
GTF2I
ZNF414
PIKFYVE
FUNDC2
KCTD5
CASTOR2
TASOR
MAP2K5
MUL1
HDAC1
CLYBL
BCKDHB
KLHL7
NRROS
NCOA3
ZNF696
PSPH
CCT6A
PSMD9
HPD
DGAT1
PCTP
IST1
ADPRS
GPCPD1
PHF6
NME6
HSPE1-MOB4
HSPE1
HSPD1
HOXC5
MIDEAS
ZBTB9
EFCAB13
GSTP1
CAPN15
PTP4A2
TOE1
MUTYH
NFRKB
MLLT11
FAM207A
CDC42SE1
EFCAB14
OVCA2
CDC42SE2
ZBED4
RRAGC
RPP21
NGRN
CARHSP1
FLOT1
SNRNP200
KPTN
ECI1
TMEM60
PHTF2
PLEKHM1
USP3
CEP112
LONP1
CATSPERD
NAA40
TGIF1
WASL
TRMT2A
RANBP1
IER5
FBXO41
SPAG4
PSMG3
RAB3D
BTBD1
MINDY2
LRRC47
TSN
TUBGCP3
ATR
HDAC2
MNS1
CRBN
WDR18
PDIK1L
ABCF2-H2BE1
ABCF2
CUL7
BZW2
ANKMY2
ZNF740
CSAD
OGDH
POLE4
GGCX
CCDC88B
TIMM44
TBC1D14
MPC1
USP4
CHIC2
ABHD16A
WDR70
HMGN2
UHRF2
FBXO43
SNX19
MED4
ARMC2
MARCHF6
TFRC
ARHGAP23
ZBTB40
INTS8
MRPS15
GTF2IRD2
GTF2IRD2B
HNRNPF
LCE3A
MRPL4
PBRM1
LUC7L
GNL3
BHLHE40
POLR3D
LGALS1
URGCP
UBE2D4
CPT2
CEP164
PARP6
CBWD1
NOL11
FAM111A
FKBP5
FAM222A
RPL36
ESYT1
ID2
NIBAN2
SNX12
TEFM
NOM1
KLLN
MLEC
TMEM50A
PTEN
CYP4V2
PPP5D1
CALM3
PIGU
PSMD8
CAPRIN2
KAT2B
U2AF1L5
U2AF1
PPP1CC
GOSR2
ERMP1
PHLDA1
PRRC2A
NUDT1
MRM2
MON2
LONRF3
PC
DGKZ
PA2G4
DOCK2
MICU2
ZBTB45
ATP5MG
DNAH7
RNF168
SGK1
MFSD4B
CDKN2AIPNL
CIPC
YKT6
TMTC4
TMED2
LRCH3
SRSF2
MFSD11
STMP1
ITGB1BP1
CPSF3
MAN2B2
IPPK
AGO3
UFL1
NUDC
NABP2
SLC43A1
CHMP4B
DIABLO
GADD45B
TMEM248
MKS1
GUSB
ANKRD36
UBE2Z
NDRG1
WDR73
TARDBP
HSPA8
APMAP
TMEM39B
POLR2J2
EXOSC4
SLC24A1
ELMO1
MED23
TTC9C
HNRNPUL2
TGDS
VOPP1
HNRNPM
FIBP
FOSL1
VCPKMT
RAB5IF
CLPP
FES
DPY19L4
TAB2
VPS37B
HEXIM2
SUSD1
RNASEH2C
HNRNPD
ATAD2B
ACAT1
YARS1
S100PBP
PIK3CD
GORASP2
CLCC1
ZNF397
MVK
PDCD2
TOMM22
NINJ2
R3HDM2
MT1F
MDN1
CEP43
PRKAR1B
GTF3C6
CEP170
USP48
SDCCAG8
ZNF721
PIGG
CENPH
TPT1
EIF2AK1
CEP85
ATP6V0A2
BRWD1
THUMPD3
ACTR3
PFKM
LRCH4
FBXO24
SENP1
SMIM12
MRPL58
NRDC
KDM1A
VPS13C
SRM
PPT1
ATP5PD
ZNF212
USP19
SUB1
BCDIN3D
NTMT1
MAPK14
ACER2
TMEM30A
C8orf76
TCEA2
NAA16
MTRF1
TRA2B
NSF
N6AMT1
ANAPC11
ALYREF
TIMM50
MDM4
ZNF584
CARS1
RAB5C
ZFAND3
CENPS-CORT
CENPS
TTC17
SLC35A4
APBB3
APC
CIAO3
TIGD6
TCTEX1D2
RPL29
RBM6
MPHOSPH10
MCEE
HMGXB3
ATP6V1H
MCTP2
CLP1
NUP214
FAM102B
EED
ZNF623
RESF1
NIPA2
RPAP3
FBXW2
KEAP1
PARL
CEP120
CMTM6
STK35
CSNK1D
LTV1
JAGN1
H2AX
UPP1
FAM219B
BICD2
DENND4B
TFAM
DCAF8
PDCD7
CUL4B
UBR4
TBKBP1
USP33
POMZP3
METTL6
EAF1
CD38
GGA1
TRAPPC3
EIF4A1
CLEC16A
EFTUD2
CCDC103
ECSIT
UQCRC1
STK17A
RPS10-NUDT3
RPS10
TSTD3
ENO1
TNIP1
METTL9
ISCU
DMXL2
WRAP73
FAM193A
LDHA
RCBTB2
HNRNPH1
SESN2
MAPK1IP1L
AKAP10
PPP1R12A
PNPLA6
COMMD8
CKAP2
IPO13
CYRIB
NT5DC1
C2orf42
KRI1
CAPZA2
UBXN2B
CEP83