ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NME6
NVL
PSMG2
CEP76
TAOK3
SUDS3
ZNF503
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
FAM187A
EFTUD2
CCDC103
NUP85
EXOSC5
BCKDHA
GATA4
IMPG1
RPL21
REXO1
DCTN1
HOXA2
SLC35B1
IFI16
TBCK
AIMP1
NUP205
POLR2E
SRD5A1
NSUN2
BBS9
SEC61B
STAM2
MRPS7
GGA3
STAM
ARHGEF10L
NTRK2
C19orf48
TSN
ATP5MG
BLCAP
GOSR2
UPF2
PES1
UBXN10
ACTR10
FRG2C
ZNF576
IRGQ
HADHB
HADHA
HOXB3
HOXB5
VARS1
SUPV3L1
PSMD12
MRPS5
SKP1
TSNAX
RBBP5
GOLGA5
PAK1IP1
C6orf52
LYRM4
FARS2
DUX4
PNO1
ETFBKMT
ADAM18
FARSB
HAND1
PCBP1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
SART3
ISCU
PI4KB
ERI3
SMC2
RUNX1T1
TMED1
RABGGTB
MRPL11
USP1
ZRANB2
PROSER1
NHLRC3
COX7A2L
SF3B3
COG4
CELF4
ADK
AP3M1
TBX2
RBKS
BABAM2
ANAPC7
ICE1
TBX3
EIF4ENIF1
LRRN4
RPS12
UFM1
SELENOF
HS2ST1
TM9SF1
LAPTM4B
CAPRIN1
NR2F1
OBP2A
XPNPEP3
ST13
RPS27A
CLHC1
MECOM
DMD
DPH6
PAF1
MED29
MEIS1
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
NTAQ1
ELOVL6
PLAGL1
CCN1
SCRG1
SIRT4
CLGN
TMEM141
APOM
BAG6
ADAMTS8
NUBP1
NFKBIL1
DDX39B
ATP6V1G2
VPS13A
PAEP
CXXC4
HOXC4
HOXC6
OR6B2
NDUFA10
COMMD1
CCT4
PRXL2A
ERVW-1
FRG2
HEXIM2
KDM2B
NEO1
OAZ3
DIAPH3
CITED2
STK36
RNF25
PDE12
TMEM14A
PIN4
MGST1
PPP1R21
SSH1
PDE6B
ZFHX4
LZTS1
SUCLG1
HOXA3
MRTFB
KRTAP23-1
NXPH2
DMAC1
PRUNE2
GOLGA8K
ZNF608
UNC5C
MELK
SLC19A2
ASPG
AKAP12
MEOX1
DCTN3
ARID3C
ZAP70
TMEM120B
CATSPERG
GADD45A
HIP1
POU2F1
ACKR3
POP5
NIBAN1
KIAA1217
WT1
FLVCR1
PKDCC
CD244
TLE3
CCDC183
CNPY2
SNCG
MMRN2
FEM1B
PTGES2
ACVR1
CYP26A1
MRTO4
EMC1
SLC48A1
LYPD1
ARHGAP11A-SCG5
ARHGAP11A
METTL24
P2RX6
PLEKHF1
C9orf153
HOXA4
FAM72D
FAM72C
SEH1L
FAM205A
ZFHX3
SCMH1
CCDC200
RARB
HOXB9
GOLGA8H
ZNF3
COPS6
ZNF587B
FGF7
PPFIA2
TLE4
SEC11C
BNC2
EIF3D
SHOX2
RSRC1
TMEM14B
CNR1
TAF9
RAD17
AK6
R3HCC1L
EYA1
PACRGL
PRR13
MXRA7
EVPL
RPS29
LRR1
GPR82
TRPS1
HES1
TNP1
RPL7
RDH10
ZGPAT
ARFRP1
TYRO3
PGPEP1L
CDC42EP3
ZBTB18
DMBT1
GPR19
GTF3C4
DDX31
ERCC1
NT5C3A
SERINC3
SCHIP1
POLDIP3
TMEM9
FOXP2
RERG
RPS24
POLR3A
MXD1
SLC22A5
DSCAML1
SNX16
ZP3
RARA
RNASEH2B
SORBS2
CPA1
LIX1
CFLAR
SLCO2B1
TEPSIN
NDUFAF8
EMP1
HOXC5
TCF7L2
NEMP2
ABCC9
OSBP2
CREB5
TMEM107
COLEC12
TPM1
FSIP1
SPIRE1
SKIL
PKNOX1
PPP1R3D
FAM217B
ZNF383
NDUFV2
RAB30
ATP1A1
ACY3
MYLK3
JCAD
CDC73
SPTBN1
GOLGA8T
ID2
CACYBP
TMSB4Y
KDM3A
FBXO34
ZNF367
ITGA3
SOX5
RPN1
SLC9A3R1
SALL4
CDH3
MEIS2
GABRB2
PEDS1-UBE2V1
PEDS1
MYPN
TTI2
GFRA3
AKAP13
KCNIP2
CS
HOXA5
CYP51A1
NNMT
TBX4
CACNA1D
USP17L20
USP17L22
SACM1L
PDZRN3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASXL3
CD96
HOXA6
ITM2C
PLCH2
GDPD5
GC
PMFBP1
TXNRD1
SIGLEC15
VTN
SARM1
CNTN1
SMIM14
COPZ1
GORAB
USP34
CDK15
PDGFRA
REC8
KCTD7
MGST2
CDIN1
IRS2
TLE2
TYRP1
METTL25
CCDC59
RND3
STRA6
EIF2S3
CSNK2A3
FOXP1
SVOPL
HNRNPD
HOXA1
POLR2D
GUCY1A1
HOXB8
HOXB7
COL5A2
PDHX
APIP
TUBB
VANGL2
MDC1
ENTPD4
SH3RF2
WDR82
NRP2
NBAS
RASSF4
SLITRK6
PLA2G2E
METTL7A
NPM3
FGF8
EFNA5
C1orf105
PLN
SPRY1
ZNF746
CAPN7
TBX18
CEP70
IL6ST
EDNRB
ALKBH5
IGF2BP3
CRKL
KRT8
KRT18
UBL4B
UNKL
GADD45GIP1
CALM2
CBX5
ELAPOR2
PDE7A
ALG10B
CCN2
WDFY3
IL1RAPL1
TENM3
NDUFB3
FAM126B
SLC25A30
PPFIBP2
ADRB3
HSPA1B
C12orf29
FZD8
WDR74
ID3
RAPGEF2
HEY2
DUSP9
CPPED1
DNAJB4
HMGCS2
SAMD11
NPHP3
DPP10
SLC7A5
SLC7A7
HAND2
CDX2
NOL4L
ST7
SOST
OTUD4
MEGF6
THRA
MRPL39
MRPL38
SEMA3E
NFIB
CD74
BRD3
SPATA25
CTSA
NEURL2
ECHDC1
SPRR2F
ESRRG
SPRED2
KANK1
TNRC18
LOC100129484
GPC3
NELL2
SMAD7
MCF2
TCF4
SEPTIN9
PRR5
ZNF644
PRR5-ARHGAP8
HOXB6
PDE4DIP
DZIP3
CIP2A
LDLRAD4
MPPED2
RNASE9
AHNAK
SH3BP4
PCDH15
TMEM185A
RIPOR2
GTF2H5
PKIA
LRIG3
HOXA9
HOXA7
IKZF4
SIPA1L1
ETV1
NR2F2
FBXL4
FHL1
PLEK2
DCN
COL3A1
SMAD3
RCOR1
SHMT2
SFXN3
PDZD7
HAPLN1
PCBD2
TNFRSF19
MPDZ
HMX2
SPRED1
UBE2I
DUSP6
MSX2
RPS10-NUDT3
RPS10
GRWD1
ABLIM3
PHC2
PFKFB3
GDF11
SH2B1
CSNK1A1
NRG2
TRIM24
GDE1
CCP110
LMOD1
GFRA1
ARSF
IL19
IGFL2
LSM6
MCM5
RAPGEF4
KRTAP13-1
KLHL2
INPP4B
NEDD4L
FAM89A
CSDC2
ZSWIM6
SRI
DISP1
SSBP3
NAGLU
CFAP69
ATG2A
FAM72A
PGF
EPN2
CDH18
STARD13
IGFBP6
SOAT2
SLBP
BARHL2
SHLD1
BNIP2
ANKRD33B
ZYX
FAM131B
ALX1
H2BC5
H1-4
XKR7
SMTNL2
MAML3
RAP2C
ANK3
BCL11B
FAM83F
SYBU
USP17L15
PSPH
CCT6A
RBM20
GPC6
SRRM3
PKP2
CDA
NKX2-5
DMBX1
DST
ANKK1
GTF3A
MYOM2
FGB
CLCN3
MT1E
DLAT
ATP2A1
RBM25
KMT2A
KRT20
PRRT4
PTGIS
PCDH18
PDCL3
SCOC
VIM
DERL3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LRIG1
MAB21L2
C6orf163
CRY1
TTC24
SLC30A4
OVCH2
SYNPO
USP2
WDR26
TBC1D5
DNAH12
UGT2B11
DLG2
UBE2H
MID1
FGD5
YTHDF2
RARG
ZNF341
RANGAP1
SNX10
SYNJ2BP-COX16
SYNJ2BP
CBFA2T2
OTUD7B
GOLM2
SATB2
RNF150
LIG3
SASH1
HOXB13
GNGT1
SPIN1
TBC1D9
SNX8
USP17L11
USP17L18
USP17L21
USP17L12
WBP4
ELF1
ANKS1B
PDHB
KDM6B
ID1
NSD2
TAS2R8
DTWD2
PPARG
OSR1
TAS2R9
TFAP4
PCNX4
ANXA11
TMED7-TICAM2
TMED7
H3C12
H2BC17
H2AC17
ARAP2
SCARB1
KDM7A
VPS33B
ARHGAP28
PYDC5
NDUFS7
ABCG2
ALOX5AP
ITGAV
SVEP1
KAT6B
SERTAD2
SALL3
XPR1
SLC18A1
IDO2
SPCS1
GLT8D1
GOLIM4
TMEM134
PAM
TTLL6
SLC25A6
EXOSC8
ALG5
CD248
AGTPBP1
SMYD3
AQP1
HEATR1
AGO1
CLUH
EIF4A2
GCNT1
ABCA4
NEK7
AADAT
PAQR8
CDH2
FGD3
EIF3A
GGT2
C19orf33
TCHP
HIBADH
DRAP1
C11orf68
ZNF280D
IRF2BPL
FLRT3
MEF2C
SMIM20
SPP1
AXDND1
RNF207
SCYL1
GAS1
CCDC175
RGS5
SLC13A4
CLDN2
IL2RG
CXorf65
TIAM2
NR6A1
XPO1
FAM72B
CPN2
BMPR2
ST3GAL6
SEMA3A
CCDC174
LIN28B
UBA3
ARL6IP5
HELT
IKZF3
RAB17
LYRM1
DCUN1D3
UTRN
JMJD1C
RBP2
PDE6A
ATP5MC1
ARHGAP24
EVA1B
SLC22A8
CLASP2
AJUBA
SERPING1
TMSB4X
CASQ1
SKIV2L
NELFE
RCOR3
ZNF407
SKAP2
PDCD4
DACT3
PRSS47
DPF3
AKIRIN1
ACYP1
ZC2HC1C
PNN
TRAPPC6B
LDB3
CMTR1
FRS2
SRCAP
LOC730183
PIGR
PGK1
CTF1
BCL7C
ARID5B
ACBD6
MAPKAP1
TRANK1
RNF125
SGK3
NAV2
YAP1
ADAMTSL4
TMEM132C
HNRNPA2B1
CBX3
ADM
CHD8
ATF6
CMYA5
CFC1
MYADM
CSRP1
LRRC17
FTL
MAD2L2
DRAXIN
ZNF391
TBPL2
ANO5
GET4
CEP85L
E2F6
PRKCE
KAT6A
ITPRIP
ABHD12
MACF1
TRIM41
HOXB2
TMEM200C
AMOTL2
MEIS3
ZBTB20
ALPK2
SLC28A3
GATA6
THUMPD3
KDM4C
MRTFA
GLRX2
LIPC
JAKMIP2
ABCB4
PLAA
IFT74
BCL9
HUS1
NCBP3
REL
ISG15
COX7A2
NELFA
KCNK6
LDB1
MZF1
FILIP1L
MFAP4
SOHLH2
ACTB
COL23A1
MAP4
TNNT2
QPRT
ZSCAN30
MYO16
DUSP4
RERE
KLHDC9
SULF1
POLR2J3
KANSL3
FER1L5
SPAG8
HINT2
PHACTR2
MTRF1L
UXS1
SYNJ2
RSC1A1
ARHGEF1
TMEM95
KCTD11
TMCC3
PPIP5K2
SH3BP5
CCND3
DYRK1A
KAZN
ECSIT
CNOT2
NCOA7
ITGBL1
RASSF10
SLC26A8
MAPK14
BAG2
TBPL1
KIAA2026
ZFX
NBN
ATAD2
MARCKS
SEC14L5
SHB
SGK1
KCNT2
TRIP12
FBXO36
CPVL
CHN2
CITED4
PANX2
EPHA3
SLC39A4
CPSF1
JAK1
DIP2C
ARHGDIB
SLC18B1
BEND4
ZNRF1
NDFIP2
FABP5
HIVEP1
NAT1
CEP41
SH3BGR
LCA5L
DEDD
MDK
NEUROG2
NEUROG3
HES3
VEZT
FGD6
PMAIP1
ARHGAP10
ZP4
ATOH1
NEUROG1
BNIP3
BICRA
LBX1
IGFBP2
NEUROD1
INSM1
LEFTY2
DAPL1
CDCA7L
DLL4
ANKLE2
C16orf91
PHOX2B
DLX4
ST18
CCDC33
PRRX1
SEC22B
MSX1
MYLK4
TPRA1
SP5
RBPJ
ANK2
FGF19
NFE2
DNAJB7
LRATD2
ARID3B