ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975310 | MG-63
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◢ SRX5975305: 143B

◢ SRX1144285: Jurkat

◣ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

MTBP
MRPL13
MAMDC2
DPY19L4
WDR97
MAF1
STX16
FAM207A
DMAP1
SUPT7L
SLC4A1AP
NDUFS7
MRPL44
ZBTB45
VPS13B
UBE3B
KCTD10
USP30
MED23
INTS12
GSTCD
ITGB3BP
EFCAB7
RFXANK
BORCS8-MEF2B
BORCS8
AAR2
PEX3
ADAT2
WDR24
WDR74
NME1
TOP3B
RPS7
ISY1-RAB43
ISY1
GOLGA3
DUS1L
CCAR2
C8orf58
WDR83OS
WDR83
MAN2B1
ZNF296
GEMIN7
MBTPS2
SNAP47
JMJD4
TRIP4
CDK5RAP1
BRF2
MRPL21
IGHMBP2
NDUFB3
FAM126B
GTF3C3
TARS2
SMG8
ZNF791
ZNF490
MRPL40
HIRA
PRRG2
NOSIP
REXO4
ADAMTS13
TMEM41A
PDE6D
COPS7B
GALK2
COPS2
NUF2
SF3A3
NDUFS3
KBTBD4
WDR36
ZNF391
TMEM242
MTRNR2L2
MSH3
DHFR
DCP1A
DCAF10
RBBP5
EIF1AD
BANF1
TACO1
DSTYK
VPS52
RPS18
MAN2C1
MTRNR2L8
TMEM222
COMMD2
JRK
USPL1
HMGB1
SF3B6
FAM228B
MLEC
SUGCT
MPLKIP
STMN3
RTEL1
NSFL1C
IPO4
TEFM
B4GALT7
BMS1
CCDC97
TOR1AIP2
TOR1AIP1
ZNF408
ARHGAP1
MAIP1
METTL9
NOXA1
FAM227B
DTWD1
SLC33A1
FRA10AC1
VPS25
KLHL20
MKRN2OS
MKRN2
MRPL30
MITD1
PIH1D2
NKAPD1
ALKBH3
ZER1
GTF3C5
TMA16
STX18
SLC39A3
MTERF4
NOL8
CENPP
MRPS31
NR1H2
GTF2H2C
GTF2H2C_2
MTMR9
RPL37
TTC4
YIPF2
TIMM29
MRPL3
CCDC57
LSG1
AURKAIP1
TBC1D19
RUVBL1
EEFSEC
TATDN3
NSL1
WDR31
TRUB2
COQ4
C12orf73
DRG2
SNRPD3
GUCD1
PPIP5K2
NME3
MRPS34
EME2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
C17orf75
SLC44A1
UTP3
GFM2
SLC35A3
NOP16
HIGD2A
RNF6
KCTD5
RAD54L2
INTS5
NDUFC2-KCTD14
NDUFC2
FAM98B
TMEM101
SMG7
SELENOH
NOL12
STOML2
SEC22B
SLC24A1
AQR
DDX1
TVP23B
RTTN
SCAND1
ZNF165
SEC16B
SEC13
PLEKHM3
PCID2
CUL4A
POLR3B
TUT1
ZMPSTE24
SSBP1
MUC3A
PHB2
FEM1B
PSMF1
METTL15
KIF18A
MEIG1
MRPL58
LTN1
ZNF205
EIF3F
PSMG3
STPG3
NELFB
NUP54
ZSCAN22
ZNF581
ZNF580
CCDC106
FRG2
EDC4
FRG2C
ZNF276
VPS9D1
TSPAN10
NPLOC4
MRPL48
RRP15
TNPO3
ACSF3
C11orf49
RPS4Y1
POLDIP3
GTF2H2
MTRNR2L1
WDR11
NMNAT1
LZIC
NUP107
MNAT1
PDCD6IP
NKAP
MRPS18C
HELQ
NXT2
FBXW8
GTPBP3
ANO8
SAR1B
HUS1
THEM4
ZNF770
MTIF2
GPAA1
EXOSC4
CCDC200
SLC39A13
RGPD2
RGPD1
NR1H3
ACP2
MTOR
LMAN2
PTPN21
RAG2
IFTAP
MRPL16
WBP1
INO80B
ANAPC5
CFAP298-TCP10L
CFAP298
OTUD7B
C18orf21
CPPED1
FBXO22
HNRNPA1L2
SENP1
PFKM
ALG10
COQ3
PDCD6
SEC11A
NUDCD3
MFAP3
FAM114A2
TIGD1
EIF4E2
SLC39A4
CPSF1
UBA5
ACAD11
DNAJC25-GNG10
DNAJC25
ALG10B
MKRN3
YJU2
ZNF623
PHKA2
PPIL3
NIF3L1
ZDHHC6
VTI1A
TTC26
ZNF668
ZNF646
RBM28
TMEM68
TGS1
YBEY
MCM3AP
AGK
CHCHD2
KRR1
CCNC
PDCD2
DHX33
COX16
GRPEL2
RAB18
TBC1D13
PPID
GABPA
ATP5PF
MRPL1
SPAAR
PEMT
MTRNR2L9
NFIB
PRSS27
PPIL1
C6orf89
BLOC1S6
PUS10
PEX13
HEMK1
C3orf18
THAP10
LRRC49
TMEM107
BBS1
EIF2D
SNRPB
ERI1
CSTF2T
TMEM69
GPBP1L1
DDT
RPL29
MRPS22
GTF2H4
MPHOSPH10
MCEE
CGGBP1
C3orf38
VPS45
EXD2
C10orf88
PSD
FBXL15
UQCC1
TMEM199
POLDIP2
ANKRD40
CYREN
MRPL39
PSMC2
DNAJC2
KIF22
MTR
DDTL
ZNF558
NDRG1
AGO3
ZNF622
ZBTB11
DPP9
TIGD6
HMGXB3
NSUN4
DUX4
ERCC6L2
COA6
LIG4
ABHD13
TRIM48
IPPK
STARD3
SCRIB
GMEB2
OPA1
SPATC1L
LSM5
TXN2
TRDMT1
SNRNP200
CSTF2
MTMR4
VIM
SMIM19
SLC20A2
EFHC1
PIGL
NCOR1
FAM118A
HSP90AB1
PRKAB1
RPS20
ANTKMT
LSM10
TEDC1
CRIP1
TEX9
RFX7
TSSC4
ZNF564
OPRL1
DNAJC24
DCDC1
MTAP
MED18
KLHL9
ZKSCAN8
FBXW11
EIF3H
ZC3HC1
CARD8
ZNF596
WDR25
WARS1
PCYT1A
BCAT2
EFR3A
ACBD6
SLC30A6
CLK3
SRSF7
INVS
ERP44
LINGO1
MTRF1
UTP23
FIP1L1
SIRT4
UNC50
COA5
FBXO28
H4C11
MCAT
TUBGCP3
COL23A1
TEX38
ATPAF1
SLC25A21
LGR6
SDR39U1
ECHDC1
MPDU1
LOC100996842
CD68
KRTAP29-1
KRTAP16-1
VPS26C
ARL6IP4
UFC1
GLO1
AP2B1
TTC14
NPDC1
ENTPD2
C2CD2
PTPN6
C12orf57
CCNL1
CLTA
OSGIN1
RREB1
GFM1
PLEC
PARP10
CHIC2
GLI4
LRRC58
FSCN2
FCMR
ESPNL
SNAPC3
COL6A1
CCN4
BRD2
SLC25A53
B3GALT4
HDAC8
LAS1L
TIMM9
KIAA0586
NFKBIL1
ATP6V1G2
SPAG8
HINT2
COPS4
ZNF579
ZNF561
ADPRHL1
TYW1B
SREK1IP1
CWC27
C8orf33
BANP
TXNDC9
EIF5B
MST1
NUDT5
CDC123
EMC4
SRP19
VWA8
SDHAF3
TYW1
SBDS
PMF1-BGLAP
PMF1
TDP2
ACOT13
RFC4
ZNF461
AVL9
ZNF570
ZNF569
ZNF846
ZNF195
NEU3
DLST
NGB
NAA20
YIPF3
TMEM128
POLR1C
ZSCAN9
SH2B1
MTHFD2L
PPP1R11
PIGQ
NHLRC4
NUP153
PTPRM
SNX16
CDC16
OGFOD2
TUFM
FAM168A
DPH7
USE1
C16orf46
ATG5
KNSTRN
DNAJB12
ZNF549
ZNF410
RSPH3
MRPL53
CCDC152
MTG1
C1orf198
EXOSC3
UBIAD1
FKBP3
FANCM
NVL
C4orf3
MARK3
EIF3D
NDUFA12
MAGEF1
CNPY3
STMP1
WDPCP
MDH1
CLOCK
VIPAS39
AHSA1
MAP2K5
METTL6
EAF1
ZKSCAN4
MVB12A
DPAGT1
C2CD2L
LRRC8A
KYAT1
PSME3
ZNF302
PUM3
SUGT1
TAF12
C19orf67
RSL24D1
PNPO
CAP1
PSMD6
NIPBL
STK3
FBXW2
SPCS1
GLT8D1
OSGEPL1
SPATA5L1
GATM
SMIM26
PRORP
PPP2R3C
NOP2
TMEM30A
C8orf76
ZBTB4
SLC35G6
POLR2A
PER1
H4C14
PYURF
PIGY
HERC3
SNRPD1
PRPF18
TPD52L2
ABHD16B
NCBP2AS2
NCBP2
EMILIN2
ALDH3A2
CACNG8
TM9SF3
H4C15
ABRAXAS1
SLF1
KIAA0825
SIT1
SLC35C2
TOMM22
SRBD1
DDX18
ATF6
TPRKB
ZNF562
NOTCH2NLC
DISP1
RARS1
NCAPD2
MRPL51
ETV5
GPR137
CBLL1
MANBAL
RPS27
RAB13
POC5
PSMD11
GOSR2
DBF4B
SCNM1
LYSMD1
SPATA6L
PLPP6
GORASP2
DDX21
JOSD2
ASPDH
BBS10
NUDT4B
NUDT4
LKAAEAR1
SLC50A1
DPM3
TANK
HP1BP3
DDX19A
CCDC14
POLR1B
SARAF
PRPF3
CCN2
APMAP
ZC3H10
YY1
RPL41
TTC23L
PIGC
TRAPPC10
FOS
RCC1
ZSCAN12
DCUN1D5
ETV4
ZNF101
ZNF35
NOTCH2NLB
NOTCH2NLA
CALM1
CCDC22
CACNA1F
ZBTB40
EIF4A3
H2BC21
H2AC21
H2AC20
ELAVL1
TSSK6
NDUFA13
EIF4G2
VPS53
TSPOAP1
MRPL54
APBA3
APTX
WDR4
GEMIN2
ARL6IP1
FUBP3
PABPC4
ELMOD2
PGAM5
RPS6
DTD1
CDK12
RXYLT1
LYPLA2
AZIN1
ARMC1
DIS3L2
PRDX1
APEH
LCMT2
ADAL
EBNA1BP2
CFAP57
PSMA5
SPG11
FAM187A
EFTUD2
DIAPH1
CCDC103
ZSCAN25
H3C13
H2BC18
DHPS
SRSF2
MFSD11
YRDC
PARP11
C1orf122
NAA50
ATP6V1A
JPT1
ZCCHC7
TUT7
DBNL
H4C12
DPM2
RNF224
RNF208
PPAN-P2RY11
PPAN
CYSRT1
ANGPTL6
HSPBP1
BRSK1
LCORL
ENPP4
CLIC5
SLC25A32
INTS2
DCAF13
PARP2
EIF4A1
SYNGAP1
SLC9A1
CUTA
KIAA0100
ARID4A
VPS36
NFKBIZ
CKAP2
TMEM249
SLC52A2
FBXL6
CSKMT
C11orf98
TTLL12
SCO1
ADPRM
LRRC24
CTR9
C8orf82
ZNFX1
TTPAL
POC1B-GALNT4
POC1B
GALNT4
STYXL1
NEK9
MDH2
GOLPH3
SMC4
IFT80
SLC3A2
RAD23A
CAAP1
S100A10
ZNF3
EBAG9
ERVH48-1
STAU1
DDX27
RMDN2
TBX15
GBA
FIBP
CCDC85B
H2AC16
H1-5
YKT6
POLR2M
MCL1
ZNF669
TIMMDC1
SDAD1
GTF2H3
EIF2B1
MRPL24
TTI2
SLITRK3
TOMM5
H1-2
RGL2
MFSD14A
TRAM2
RPLP1
ID1
VMP1
PTRH2
KAT6A
ZNF684
TFRC
RFC2
WDR43
IPO7
KRBA2
CCNT1
LMNA
RHOT2
PGGT1B
MELK
WDR55
HERPUD1
CCDC38
AMDHD1
PROSER1
PLRG1
NHLRC3
L3HYPDH
JKAMP
EPN1
PNP
PGAP3
ERBB2
ZFP62
UBE2M
TMEM230
NKIRAS2
DNAJC7
CHMP2A
STK36
RNF25
KDM5A
CCDC77
UGGT2
U2AF2
SELENOK
MOCS3
MBNL1
DPM1
CCT5
ATPSCKMT
DPY19L3
SSNA1
RPS3
C20orf144
ANAPC2
ACTL10
H2BC11
H2AC11
CALM2
ATAD2
OSGEP
MAT2A
APEX1
PCIF1
AMOTL2
SYTL2
H3-2
ZNF697
IGBP1
H3C15
H3C14
H2AC19
H2AC18
GNAI3
CAST
MAK16
MRM1
FARSA
CALR
ADAR
SETD6
H4C2
H3C2
H2AC4
EXO5
RHOB
ZSWIM6
ZNF682
SERPINI1
RPL37A
PDCD10
LAMTOR5
CYP4F11
DUSP6
BCDIN3D
TUBB3
MC1R
UBLCP1
MED30
TRPS1
SLC7A5
MTRNR2L10
C15orf61
PNN
LRRFIP2
HEATR6
DUSP1
ASMT
PRADC1
HIPK1
CCT7
AP4E1
ZNF12
NEPRO
TAF1B
RNPS1
ITGB1BP1
CPSF3
DHX8
SLC35E1
RBM34
PNKP
LINGO2
H2BC12
H2AC12
MRPL27
MINPP1
EME1
TBRG4
HSPA5
PABPC1
OXNAD1
DPH3
USF1
P4HB
NOTCH2
HIF1AN
GMFB
UAP1
TMEM129
TACC3
RPL6
INTS9
HMBOX1
FANCD2
APPL2
UNC45B
TBL3
RNF151
NPAS4
SYCE2
FBXW9
RPS9
GADD45B
DDAH1
CCN1
SCAMP3
LAMTOR1
ASPH
SPDL1
RB1CC1