ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771666 | N2102Ep
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◣ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

OTX2
SOX6
NRG1
REST
SFRP2
MOBP
LIN28B
DNMT3B
METTL11B
WFDC8
ZNF343
TIMP4
MED12
PRICKLE1
GIMAP5
FLAD1
HESX1
FGD4
FBP1
VENTX
ETV1
GDF3
FGFR2
AK4
TDGF1
JPT1
SNRPN
FZD2
KLF17
SACS
PSMD9
HPD
SPIC
PLEKHA5
CAAP1
PPP1R16B
C22orf39
PCDHGC4
PITPNM2
TCHP
CDC14B
TBC1D16
PIPOX
DHX32
METTL7A
PDCL
DET1
CNGA1
GSN
SNX16
KRTAP3-1
GEMIN7
CER1
RGSL1
PPP1R18
PALM2AKAP2
ACCS
ESRP1
PCDHB8
MBOAT2
KIAA1522
USP44
PRRC2B
NADK
CNR2
KCNIP4
DPPA4
GSPT2
RIF1
DNMBP
CCL2
NDST1
ANK2
DCLK1
OBI1
CCDC169-SOHLH2
CCDC169
LYPD1
UGT1A6
PCDHB13
ETV4
FBXO40
SYNPO2
MTF2
KRT8
HDAC9
IFIT3
CCDC92
DUSP12
RIMBP2
PCDHB5
PBDC1
LRRTM4
ZNF318
MACROH2A1
ACSBG2
SFT2D3
LIN28A
ZNF532
GRM4
TRIM54
WBP1L
SLFN12
ZYG11A
WDR49
RIPOR3
SGMS2
TSGA10IP
SERPINB6
VOPP1
KLHL4
KCNMB2
NLGN1
DACH2
RNF213
CFLAR
SMAD3
F11
TMEM220
KMT2B
SOX15
HES5
RAB25
FAM153B
MYOM1
LPCAT4
OVCH1
ZNF202
EPB41L1
ST18
GADD45G
GRAMD2B
PMEPA1
IER5L
ARID5A
ABCF3
CYRIB
SLC2A11
LRRTM3
DCLRE1C
LIFR
ZSCAN12
TMCC1
CDH10
CCN2
ZNF649
SP5
SLC10A2
ERICH3
SOX5
ZFYVE1
SPAG9
KLHL5
WNT5B
CPA5
IL23A
RND1
OLIG3
SRRM4
CCDC167
TACC2
ADA2
SASH1
ACSL1
TRPM3
PDPN
RAP1A
CORO6
MPZL2
EIF4B
MS4A12
TTC39B
RNF19A
RFX4
AUH
GCNT2
USP48
CCDC172
SET
RBMX
MRGPRX3
PCDH18
NEBL
HOXB1
GALNT8
RGMB
HLCS
DDX3X
KLF7
CNBP
APH1A
IL1RAPL1
STOX2
PBLD
HNRNPH3
STMN1
TNC
RFFL
SLCO4C1
YWHAQ
ODF2
FAM162B
JAG1
SLC35G4
EFCAB8
AKIRIN1
THEM4
ITPRIP
SLCO5A1
KDELR2
GJA1
ALPK3
TINAGL1
ADGRA1
MAN2C1
SYTL2
EGFR
C1orf167
ARL5C
DPP4
INSYN2B
NSMCE4A
CLEC9A
DERA
RASSF8
OR2A1
C1R
SUCLA2
LOC107986453
BAMBI
KMT5C
C7orf33
CNKSR3
ZNF747
TMEM114
DHRS3
ERMN
CPVL
MGRN1
OLAH
ZNF469
C16orf78
RNF43
GOT1L1
SLC2A14
CDH6
CPN2
SHF
FOXP1
KLF5
FMN1
GREB1
PLAGL1
IL20
ST6GAL1
TUBB
NODAL
MB21D2
ARSD
CAMTA1
SLC16A8
TMEM184B
UTS2
ETV6
RBM47
PLD2
EXOSC4
USP53
EIF4E3
PRKAG2
TRIM22
EIF1AX
ATAD2
LMAN2L
ZSCAN10
CPNE2
HMGCL
BCAT1
ADGRL2
CA8
DGLUCY
HLTF
MAP2K5
SCNN1A
LTBR
RAB34
MDK
CTIF
SUPT4H1
KIFBP
FGFRL1
AHCYL1
NFE2
SPATA12
AHCYL2
PLPP2
ZNF763
PPM1H
FGF1
ACVR1
RGS3
PCDHA11
ZNF254
PBX1
IFRD1
MMP10
CLCF1
SMARCA2
MFSD6
RFC5
TGM6
ALDH7A1
PSKH2
CCR7
DISP3
S100A16
EID3
PXMP4
SEMG1
TAL1
PROM1
DAOA
PRDM14
TNRC18
LDB1
HMGB1
HAS3
ALDH3A2
NOTCH1
CTNND2
DPPA2
MAGEB4
SHROOM3
MEIG1
NINJ2
TCL1B
GALR1
RASAL2
RNF44
ZBTB38
ADAM28
SPPL2B
LSM7
SLC35G3
SLC35G5
LLGL1
IL17RD
ALPL
CPSF4L
TBC1D9
CEP41
RIMKLB
NDUFS7
NHSL2
MYO7A
RBPJ
RHCE
RNASEL
EIF4G1
SEC22B
LPP
SERPINF1
ZNF101
GRHL3
GKN2
FAM227A
CBY1
ZCCHC12
PAG1
ARID1B
ATOH1
CAD
BIK
SEPTIN9
ANKDD1B
LGI1
DAGLB
LRRC10
DGCR8
CCT2
AASDH
ABCB8
ARHGEF10L
PCYT1B
MEF2C
RAD23B
BFSP1
CABYR
PKDCC
LEMD2
CUL4B
GJC1
SERPINB3
PCDHB1
DHX8
SEC31B
NANOG
GAB2
WFDC6
H4C9
KCNAB1
VANGL2
SH2B3
PAIP2
SPHK2
ETFBKMT
MRPS15
MGAM2
RHD
NRCAM
DST
GNA12
TMEM202
BMPR2
MCTS1
LOC105372977
CARHSP1
MSH6
KIFC3
ZBED9
PLCH1
BRINP2
CYP21A2
EBF1
NDP
OLFM1
VEZT
FGD6
ZBTB45
MANSC1
SMARCAD1
SLC17A6
DACT3
LMO4
GRIN3A
CCND1
AMOTL2
PLEKHG2
TENM2
FUZ
ZNF358
CD300LB
C22orf31
RBP1
ZFP64
TCTEX1D4
BTBD19
ADD2
PIM1
SLC25A24
TRAK1
HSH2D
LPAR2
CELSR3
INKA2
PHACTR1
TFDP2
ZSCAN31
MYH2
GRK6
ZSWIM4
SORBS2
HELLS
PTMA
PDE4D
CD200
DAB2IP
FBXO11
SLC11A2
CDH9
C1orf100
ITGB8
TFAP2A
ADAMTSL1
PSMB3
CYB561
UACA
LDHD
TRDMT1
GRHL2
LASP1
FASTKD1
EPB41L5
OC90
TMUB2
GSG1L
CTTNBP2NL
FAM120B
ANKS1B
PSAP
TBC1D8
ZBED6CL
TLE3
TSPYL4
DSE
CTBP2
MX1
MAP4
STK17A
ACSBG1
ANAPC15
TDRP
ATPAF1
TSKU
PUM2
SKA2
PRR11
SERPINB4
SRC
USP39
C2orf68
GSTO1
NME4
ZNF3
QPRT
ESR1
DNMT3A
SCOC
FOXH1
MFSD5
TBX6
SGK3
NDUFB5
MRPL47
RGS5
PALB2
DCTN5
SMARCB1
CYLD
TJP2
STAU1
GALNT14
NAALAD2
EFHD1
PDP1
XPC
LSM3
SRPK2
LPAR4
SCG3
CDX1
PRPF38A
ORC1
CPSF6
TSTD2
NCBP1
ZNF304
NOL4
XK
MED23
PARVG
SEC22C
SS18L2
PKIB
C1orf127
CLCN5
CCDC146
OGT
GLIPR1L2
IL3
SMARCC2
G3BP2
PPP2R1B
KLK13
ISL2
CDHR3
SUN2
USP9X
DCDC2
C2CD5
BEND5
CTC1
FBXL19
SHISA3
CEP164
DNAI2
ARID2
DLG3
TESK2
NRK
HTR2B
MMP11
FAM3A
ETFB
CEP63
ANAPC13
SLC4A2
CDK5
PTK2
UMOD
UTRN
OLFM2
GLRX2
SCGB1D2
C2CD4A
CABLES2
S100A2
NCAPD2
G3BP1
PACSIN2
TOMM40
CNP
SPTBN1
MYEF2
CTXN2
KLHL12
TRIM41
FAM107B
CENPH
RAC1
ABCA1
ZNF611
GLUL
GRB7
HK2
ZNF562
PHLDB2
PITX2
TCF4
PTPN12
IGDCC3
TBCC
BICRAL
KATNAL2
INAVA
PIAS2
NOTCH3
WDR72
WDTC1
STRA6
SLC7A11
WBP1
AP3M2
CACHD1
CRYL1
IL15
MARCKS
PIK3R3
HNRNPUL1
MRO
ZFHX2
SLCO1C1
DNASE2
FRMD4A
SPATA6L
PLPP6
CAPRIN1
CFAP20
RHOBTB2
MRAP2
LYVE1
RBBP6
RUFY1
EIF4G2
EGR2
SLAIN2
LYRM2
TOM1L1
RBBP7
URGCP-MRPS24
URGCP
PLEKHG1
GET3
TNFRSF21
ANP32B
PIN4
MAT2B
NMI
ZNF34
SMAD2
JAK1
PRR15
PYURF
PIGY
HERC3
CDKL5
ATP2B4
PSORS1C2
LIMS1
PTGFRN
IER3
CALD1
HIP1
ZNF37A
DOLPP1
HSPA6
APOBEC2
TCF21
MDH1B
FASTKD2
COG7
ARHGEF37
CCDC171
CAMKV
PPARGC1A
LTA4H
H2AC16
TTI2
PRR7
EIF4A1
RP9
ZNF250
RADIL
FAM169A
NICN1
TAGLN2
GPR141
ZNF85
CCDC50
CLK4
PLEKHA8
CENPF
UNC5D
SPRY4
ZNF737
RFWD3
NUP153
KIAA0895L
LZTS2
IL5RA
MYOCOS
ICAM3
MYNN
CNN3
DYNLL2
TBX22
WDR74
HEXIM1
SPATC1L
KDM3A
RBFOX2
TBK1
CREB5
CBLC
IGF1
XAB2
H2AZ2
ING1
IFNK
THOC5
MYLK3
NTNG1
IGFBP3
HNRNPL
BCL9
RNF122
CHD6
P4HB
SYT1
PTPRB
ARNT
PWWP2A
DIPK1A
RBM22
AGO2
AADACL3
GNAI2
LMO1
ZIC1
ZBTB20
NRARP
DDX17
MTRNR2L2
CELF3
MTRNR2L8
ZSCAN2
PHF5A
ACO2
ZFC3H1
THAP2
KDM2A
HGS
ARL16
IQCH
AAGAB
NDUFS5
CYTH2
OSBPL1A
TES
GPSM3
ARIH1
DICER1
PGK1
SNAPC3
TMEM41B
SLC33A1
H3-3B
ZNF775
FAM181A
WDFY2
ZNF195
CHN2
RGPD2
RGPD1
LIMCH1
MSANTD4
C20orf96
SLC7A5
UFD1
CDC45
SRSF7
POLB
SYAP1
ESRRA
SIX2
TRMT2A
RANBP1
ZNF428
TMPRSS7
DTNA
SLC16A13
MCCC1
HMGN1
FOXO6
ZSCAN9
PDIA4
VASH2
SLC25A36
SYNCRIP
HSPH1
CFL1
GADD45A
GFRA1
SLC25A11
RNF167
NUP160
RTBDN
CD2BP2
NEDD9
TUT1
SAXO1
RRAGA
SH3GL3
RAB30
SDCCAG8
CEP170
OGA
KCNN2
WDR36
TIAL1
PES1
PRR5L
PDE4B
PKNOX2
PTGS1
EGR3
AKAP9
MOSPD3
YLPM1
CSRNP2
IPO11
PRM3
SINHCAF
ABAT
KIF21A
TCN2
BORCS6
ZNF608
TIA1
ADAR
KNTC1
PIF1
RGS12
EMSY
SENP8
MYO9A
ARF4
DPP3
ZBTB40
ZNF474
RSPH14
ADRM1
TLX3
STK32C
LRRC27
MTRNR2L9
ERGIC2
NUP214
JUP
RPL27
ZBTB18
C2CD4D
LCOR
UBQLN4
LAMTOR2
BBS7
TCF20
BTBD3
HACL1
BTD
ZDHHC5
CCPG1
C15orf65
HIP1R
ETFDH
C4orf46
MMACHC
PPME1
C2CD3
SPHK1
SFPQ
MMRN1
YEATS2
HNRNPDL
ENOPH1
ATAT1
RBM39
PRTFDC1
ZBTB6
HEXIM2
F11R
TRAK2
STRADB
PSMB7
DLG2
ARHGAP24
PELI1
GOLGB1
PYDC5
IFI16
CRISPLD1
RAD54B
FSBP
ZBTB8OS
RBBP4
NUFIP2
OAZ2
ZCCHC8
ZNF106
CCDC88A
EMC9
ZNF593
C1orf232
POLR3E
TSNAXIP1
RANBP10
GAS2L3
FAM102A
PTPRD
SYBU
KCTD6
BPNT2
CLIP1
DNM2
HBP1
ACTR1A
ZFAND3
SMIM14
WASF1
CDC40
PTPRZ1
CDK5R1
H4C14
GGH
SNX27
IFTAP
TSPAN19
LRRIQ1
CLIC1
ST7
ZNF292
EP300
MAP2
UQCRQ
GDF9
CX3CL1
CDK12
GOLPH3L
CHD8
FAT1
ERICH6B
PNRC1
GFM2
ANKRD6
HSPA13
SPEM1
PRKRIP1
ZNF627
ZNF506
VMP1
PTRH2
TAGLN3
MTUS1
ZSCAN18
RSF1
AAMDC
PACRGL
CITED2
WBP11
EMID1
C12orf60
C11orf58
ADNP
ABCB4
LTBP1
SLC6A9
GDF5
CEP250
DLX5
CHD7