ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX553658 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◣ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
PDE11A
CLTB
VN1R2
CAT
ZNF117
RABGAP1L
SLCO1B3
BAAT
TTYH1
THOC2
DISP1
DEFB124
BCAR3
PSMD11
KDM4E
PARP14
CT45A10
FUT3
FAM83D
YWHAB
FKBP5
CT45A7
CT45A6
CT45A3
RNF126
PES1
SPG11
TCN2
ZSCAN31
FGD3
PPP2R2A
WIF1
PHF21A
SPDYA
PPP2R2D
POMP
EID2B
ACOX3
TRMT44
CBX1
GPRC5B
PKD2L2
ORC4
MBD5
DNAJC21
CDYL
MMP7
NOD1
PXDNL
NRN1L
BTD
ITGB3BP
EFCAB7
PIP4P2
RABGAP1
CD5
TMEM132A
CALCRL
XPO1
XKR7
WDR97
FABP7
ZNF567
ANO5
PCOLCE
PIAS3
DAB1
UBE2O
AANAT
SOGA3
FEM1C
NRCAM
DUSP6
OTUD7A
ADORA2A
INPP5A
PLCH1
RUNDC3B
LRRC29
TAS2R4
UNC5CL
TSKU
PSMB2
SNX16
ADAMTS20
SLC37A1
ZNF280D
PDE7B
GC
RAP2B
SLC4A8
BTNL2
FBXL12
CLK4
ITGA4
ACOT4
DMAP1
C3orf14
VANGL1
RPS7
ABCG1
NEMF
VCP
CYP4F11
NEUROD4
WNT16
SLTM
FRMD3
ZNF426
CCDC185
DHRS7
NME2
M1AP
NXF3
ARHGEF6
ATP6V0A4
HAO1
AKR1D1
TATDN2
NTNG1
ZMYM5
FDFT1
MLLT3
TCF4
RAB23
OPRM1
RPL10L
BSDC1
JMJD1C
REEP3
KRTAP19-2
ZNF320
IGSF11
RALGPS1
TEX55
YPEL3
AGPAT3
C17orf75
TRIM32
ASTN2
RAB30
STARD13
SLC41A1
RAET1E
SERPINA5
KRTAP5-10
THOC5
PPBP
CSRNP1
CEP41
MTRES1
DCAF10
DPP10
XKR4
PRUNE2
CAMK2G
TRAPPC3
RAB37
ATF7IP2
ZFAND1
KHDRBS1
HTR5A
DCTN4
ZNF114
FBXO6
PRRC1
NUF2
CDH10
STX16
DNAJC6
SAMD13
RALBP1
PER3
KLF17
SNTG1
DSTYK
CADM1
PITPNM3
POLR3B
GPR78
MRGPRX3
NBPF1
POLE4
CUTC
COX15
ALDH3B1
ZNF362
MAP7
RPL37
ANK2
FCGRT
ADD3
ANK1
CCDC181
RBM44
TRA2B
GRIA2
PLCB2
SPESP1
CDC73
EMC9
KCNS1
LSAMP
OPCML
MRPL44
NGLY1
RTKN2
KCNMB2
SPSB2
DPYD
MPPED2
PDHB
GTDC1
MPO
STAR
GPR50
SIGLEC11
SFTPD
METTL9
KBTBD3
AASDHPPT
SYT1
PPP2R2B
PASD1
ADAMTS14
COMMD4
PPP1R12B
RIPOR2
NHSL1
ERLIN1
PTPN4
ZNF326
UBXN4
GLS
FAM86B1
HLA-DPA1
LIPA
ABCD2
ZNF552
RNF207
TGIF2
CFAP92
NAA20
RNASEH2C
ZDHHC4
POU3F2
PPP2R3A
EVI5
COL21A1
GNG2
FAM72A
FAM72C
CCSER1
SAR1B
DHRS4L2
SAMD4A
RNF145
RIN3
CD47
P3H4
C1orf54
OTUD6A
TTLL12
CORO2B
FFAR3
RHEX
SARAF
ING2
DDHD2
KCNT2
CBR1
JAKMIP1
DNAJC25-GNG10
DNAJC25
GALK2
HIGD2B
BBS4
ASB14
HCRTR2
PPP1R2C
SLC24A5
MTRNR2L2
ARHGAP39
DHRS4L1
HYAL1
ATP10D
ST8SIA1
RAB38
CYREN
F8A3
F8A2
F8A1
MKRN3
PDE4DIP
STC1
EFHD1
GSN
RAB14
DDX31
NRG2
AP3B2
AQP7
SELENOH
LYZL2
ELF4
DHTKD1
NSMCE4A
PGK1
SCHIP1
CASR
C11orf97
ANKRD62
RTP4
TTLL1
EDEM2
PDE4B
HMGCS1
CERS3
INTS12
GSTCD
ATP6V1B2
GCA
F5
DGKD
ACTL9
AMN1
LMLN2
GTF2H2
RTN1
PRKG2
CSRP2
SCPEP1
R3HDM2
TMPRSS4
RBBP5
ZFP30
CNTLN
UQCRQ
GDF9
RUNX2
DPEP3
CCDC89
MT1H
ARHGEF7
ASTN1
NPAS4
EEA1
MYCBPAP
ARHGEF37
EIF5A2
PLPP5
RNF130
MLH3
SLC25A51
MTERF4
RCAN1
RABIF
H2BS1
CAMK1G
SPP1
SYNPO2
ETNK1
CADM2
NELFCD
PDZRN4
IFNB1
NEK5
TMEM121B
PRSS58
CFAP298-TCP10L
CFAP298
ACBD4
UCHL3
COMMD6
MFSD8
ABHD18
PLCD3
HS3ST2
CLEC14A
TEFM
STN1
SF3A2
PLEKHJ1
C10orf53
PUM1
BARHL1
NTSR2
CDA
FGF1
BMPR1B
SST
BTBD11
MTF2
USP30
PDCD6IP
PKD1
PMEPA1
CLUL1
NUTF2
CENPT
LIG4
THAP11
SLC39A8
NECTIN1
MAML2
CXCL5
CHCHD6
HERC6
CADPS
IL2RB
CYTL1
IQSEC3
FABP6
JADE1
ATP13A3
WDR73
MC3R
STRA8
GBE1
RASA2
PTPDC1
SLC13A3
PINLYP
LIMS1
LYSMD2
PTPRO
TMOD2
FRA10AC1
EIF2D
MRPL21
IGHMBP2
GLIPR1L2
IMPA1
SERPINI1
PDCD10
ANO3
LAMA2
OR6C1
PPP1R3A
TMEM41A
TCAF2
UNC80
ELAPOR2
KRTAP2-4
TMSB4Y
TMEM68
TGS1
PLEKHM1
SLC26A4
ZNF33A
PI4K2B
CCKBR
TTC39B
EPHX4
STX18
MOB4
PPP1R8
NUDT7
CNOT4
MAP2K1
C1RL
UBR5
SYT16
FER
RPS6
ART1
TRDMT1
METTL8
DCAF17
IL1R1
PLK4
PSMD5
SLC24A1
TGFBR2
PIGBOS1
PIGB
MINPP1
SLC52A3
SET
GTF3C3
ALDH9A1
TRAPPC5
MYOM2
DACH1
PKN3
PFKFB4
PCSK6
PAH
TMEM270
SLC44A1
CLASP2
KCNH1
FAM25E
GLRA1
TMTC2
VWC2L
BRCA1
TCAIM
ZNF563
EXOC1L
OLFM3
SPOCK3
GBP5
MAMSTR
SLITRK1
OAT
MARCHF11
CCDC112
AFF1
CRIP3
POLDIP3
CIZ1
CAPRIN1
KCNA3
SLCO1A2
ABHD2
SYT13
WDR36
FGD4
ZNF292
PPP1R3C
PFDN5
ENOSF1
GALNT5
LUC7L2
FMC1-LUC7L2
ERCC6L2
CRLF3
ST6GAL1
PRKRIP1
EPS15L1
MEGF10
C8orf58
HNRNPD
TNFRSF10D
OMA1
SNX8
LBH
CADM4
PGPEP1L
ANO10
MYLK
LHCGR
RAB6A
MANBA
BSCL2
GNG3
SHCBP1L
AURKAIP1
PPA2
CCDC88B
SFXN2
ARL3
MOCS1
ZBTB8OS
RBBP4
ACSL6
SPTB
RAPGEF5
CARTPT
MLEC
WDR24
ZNF529
UBXN7
PTPRD
MYORG
PTX3
MED23
PEX3
ADAT2
GPAM
FANCL
CLVS1
FAHD2B
KANSL1L
ITGAV
LCP1
SCMH1
FAM126A
DLG3
LY6L
CLEC9A
FSTL5
UPP2
MDFIC2
SEC23B
NFAT5
TTC37
ARSK
UQCC1
P2RX5
SNURF
SNRPN
TMEM235
SH3BGRL2
ACAP2
DGKH
ZMAT4
TMEM213
GSTA4
MEGF8
YBEY
MCM3AP
ARHGAP24
PAAF1
COA4
PAWR
DICER1
RNF6
WDR31
JAKMIP2
MRPS17
GALNTL6
SLC7A14
UIMC1
MGST3
RAB11A
GPR89B
TRIM25
TP53I11
FUT9
RAD54L2
MCOLN1
VRK2
TENT2
AP5B1
C1orf174
KIF21B
MAP3K14
ODF2
UNC79
LRRC59
ZNF555
CNN3
TEX10
DUSP26
MTRNR2L8
SLC35A3
ABLIM1
PEMT
GRPEL1
MAP2K4
GOLGA6L7
TBPL2
GH2
DAPL1
PPFIA2
SIDT2
GRK7
YWHAQ
ACIN1
SLC36A1
FOXN2
LRBA
KRTAP4-6
IGFBP5
SLC8A1
TTL
EDNRB
KDM1A
C10orf88
TOMM20L
EXOC2
KAT6B
C20orf194
LRRC6
ASCL5
AP1S1
RORA
WIPI1
KRTAP2-3
QSOX1
CCDC184
TMEM229A
KRTAP2-2
MNAT1
HMGB1
ALG10B
DPY19L4
EPHA3
SPEF2
CPLX2
RCAN2
PCDH15
USP53
ZFPM2
ZNF35
CCDC14
OSGIN2
TMEM71
PHF20L1
PRSS35
ROPN1L
CD40
FAM98C
OR1E1
TAOK3
ADAD1
USP9Y
PTPRR
TENM2
STRIT1
DEFB107B
DEFB107A
CAPN6
TVP23B
DROSHA
C5orf22
RIMBP3C
RIMBP3B
PJA2
ANKRD34C
CTSA
SLC49A4
IQUB
NPPB
ADCY7
MRO
WARS2
PLCL2
SFT2D2
SCN11A
CHMP4C
QPRT
SYN3
RAPGEFL1
PRKCD
LRRC4
SLC17A8
MEX3C
ATP6V0E1
TYMSOS
TYMS
ANP32A
DSCAML1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TATDN3
NSL1
EIF4E
EPHA5
EPHA10
ZNF629
SLC25A20
DNAH12
TDRD1
DAZL
RNF187
GEMIN5
PDE8A
ZNF354C
DCBLD2
KCTD8
OSMR
PCNT
VAMP2
ZNF827
SEC24C
RNF144A
IL18
REXO4
TYW1B
PAIP2
KITLG
F8
TSLP
DNAJB12
MTIF2
CDC5L
TPD52L1
PDE1C
LEMD2
LOC100421372
HSPA14
CDNF
CSGALNACT1
CTNNA2
KCNV1
GPRIN2
PSMF1
SMU1
TSGA10
C2orf15
KIAA1958
C9orf147
HSD11B2
ENPP2
SCAND1
SRP9
TMEM60
PHTF2
NDFIP1
ATG16L1
SLC8A2
NFKBIL1
CRISPLD1
CALML5
AJUBA
FKBP7
DYRK3
TRMT1L
SWT1
GAS1
APCDD1
CLPB
NEGR1
ALDOC
ATP5PO
PEPD
SYNPO
TRMT5
SLC38A6
CDK5RAP1
COPS7B
ZSCAN30
CBWD5
CBWD3
CBWD6
THAP10
LRRC49
NGDN
CCDC50
RAP2C
WDHD1
SOCS4
EXOSC6
CALB1
CHD1
CSRNP3
STARD4
MLLT10
PIR
CDKL5
STYXL1
CRYM
CCDC175
HMGCLL1
GPRASP2
METTL11B
KRT40
PGRMC1
CPXCR1
CASC3
GPN3
FAM216A
GMPS
CHGB
TUBGCP3
ZC3H14
DIABLO
ST6GALNAC5
PKP4
PCK2
UBASH3B
PLA2G2F
METTL25
CCDC59
FAM227B
DTWD1
PUS10
PEX13
ZFYVE9
SRSF10
SPG21
ZNF77
STRA6
CRYGN
TACO1
GFI1B
MRPL58
ELOVL2
TSC1
SUPT3H
PPP3CC
ZNF414
HUNK
SLC9C1
CHRNA9
KLHL33
GNAL
STAU1
PRAME
HECTD1
PRKAG2
PCYOX1
GLRX
ECT2L
SLC16A7
TNFSF15
TMEM40
PRAP1
RPS29
MDP1
ARL13B
FAM240C
TMEM242
MAPKBP1
CDIN1
VSTM5
ZNF692
COX4I2
ZNF829
ZNF568
RAB5IF
PYM1
SLC37A4
TMEM254
TIRAP
HSD3B7
SLCO5A1
FCSK
DNAH10
LSP1
RERE
SNX5
MGME1
PRICKLE1
TACC1
SLC2A11
ATP6V1G2
ADAM23
GGT7
SEMA6D
PLEKHM3
HSPE1-MOB4
HSPE1
HSPD1
NEK7
GRAMD1C
UBE2D3
ATP5F1B
NRF1
PKIG
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
BCORL1
FYN
FIG4
AK9
MISP3
WDR87
SIPA1L3
GADL1
KANSL3
TIGD6
HMGXB3
HMGCR
TAGLN2
TEX15
TBX10
GBA
PDGFD
SMIM8
POLR3G
MBLAC2
R3HCC1L
PACC1
MTHFR
CTCFL
PRSS48
SKP2
LMBRD2
SEC31A
SMAD5
BCKDHB
TNFRSF19
PDE4D
EDN1
ZNF233
SLF1
KIAA0825
SELENOK
FAM47E
NAP1L3
FAM133A
STEAP4
CTPS2
FZD9
FAM47E-STBD1
VAMP3
SH3BGRL3
TNFSF13B
FAM13C
CFAP44
VIP
FRZB
PSMA8
FBXO40
OR51H1
FGF12
LRRC4C
TDP2
ACOT13
LRRC37A3
ZKSCAN8
CCDC71L
NDUFAF6