ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441335 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◣ SRX5441335: HeLa

◢ CPSF3: STRING

RABL2B
RABL2A
TSN
ZNF335
MAPKAPK5
DYNC1LI2
SRD5A1
NSUN2
NUP85
VDAC2
REXO1
CACTIN
POLR3F
DZANK1
PSMD12
ICE1
IPO13
OAZ3
RWDD1
NVL
CAPRIN1
NME6
HSPA9
NCLN
MRPS7
GGA3
POLR2E
GOSR2
SLC35B1
ZNF576
IRGQ
SUCLG1
EFTUD2
CCDC103
C19orf48
PSMG2
CEP76
LYRM4
FARS2
UBE2I
UPF2
DCTN1
MRPS5
MRPL11
ACTR10
VTI1B
COX7A2L
PSMD1
SUDS3
BLCAP
COMMD1
CCT4
EXOSC5
BCKDHA
VARS1
RBBP5
STAM
CDC73
SEC61B
SKP1
RABGGTB
SART3
ISCU
STAM2
PTGES2
TSNAX
HADHB
HADHA
USP1
PI4KB
PES1
ATP5MG
ZRANB2
SNAPC5
PDHX
APIP
TAF9
RAD17
AK6
RPL21
NDUFA4
EIF2S3
PAK1IP1
C6orf52
FARSB
PDAP1
BUD31
C18orf32
NUP205
SUMF2
PNO1
SUPV3L1
MRPL24
SELENOF
HS2ST1
B3GALT4
POLG2
AXDND1
VEZF1
ZC3H10
TM9SF1
RPS27A
CLHC1
TMED1
GADD45GIP1
EIF4ENIF1
DDX39B
PIN4
ATP5F1E
ANAPC7
GOLGA5
GCN1
SMC2
C6orf226
DPH6
RPS23
ATP6AP1L
BAG6
APOM
RPL35A
IQCG
MRTO4
EMC1
RXYLT1
EPN1
BICRA
ANKLE2
EDC4
RIT1
TTC8
FAM131A
HSPA1B
COX20
SCRIB
RPS12
DVL2
AMDHD2
SECISBP2
FLOT1
NRAS
PCBP1
FAM104A
C17orf80
KRBA2
RBKS
BABAM2
TBCK
AIMP1
H2BC4
H2AC6
DNAJB14
NDUFA10
H4C14
AKAP8
UFM1
WDR90
TLCD1
C19orf53
PAF1
MED29
TBK1
H4C12
ZNF383
MRPL38
MAZ
CD68
TMPPE
GLB1
DAPK3
SF3B3
COG4
BAZ2A
H4C15
RRP36
CNPY2
ADK
AP3M1
GRAMD2A
DGKZ
RNF166
CTU2
PROSER1
NHLRC3
LAMP1
TMEM132A
RPS29
LRR1
TIMM13
RPN1
PCBD2
XPNPEP3
ST13
NANOS1
ROGDI
CUL7
ZNF34
NAT10
GTF3C4
DDX31
H4C11
SEC31A
DENR
CDK12
NAPRT
H4C3
GET4
DNAJC21
OSGEP
APEX1
SYNRG
PRKAG1
GLRX2
INPP5E
ECI1
UPF3A
NOLC1
CCDC34
H1-2
DPH7
CHMP2A
MAD1L1
FBXO4
ALKBH5
MYG1
SIRT7
PKD1
SLC35E3
XRN1
AHRR
WDR74
GORAB
ATAD3A
RHOT2
POLR2C
PHF1
ARHGAP11A-SCG5
ARHGAP11A
FDX2
CMTR1
VPS28
PRRT2
H3C15
H3C14
RPL7
RDH10
TTC33
POLDIP3
POLR2J3
NDUFB10
RBM39
SPATC1L
GBA
C5orf24
STK36
RNF25
DHRS11
ATAT1
IMPDH2
MEPCE
ZCWPW1
EIF2D
MSH4
PNMA1
SRSF11
SYCE2
LRRC40
THOC5
RAD23A
DNAJC9
MLX
JMJD8
H2BC21
H2AC21
H2AC20
NDST2
CCDC138
RPS10-NUDT3
RPS10
SEC11C
CISD3
MAPK8IP3
NPM3
UFSP1
MATR3
ERCC6L2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DRAP1
C11orf68
SLC25A10
PRDX1
BTBD10
NDUFS3
KBTBD4
SCAMP3
MAP2K2
ZNF341
HAX1
SELENOH
CRTC2
EXOSC6
MCOLN1
TRAP1
ARFGAP2
SMIM27
TOPORS
VPS50
HEPACAM2
ZBED8
ZMIZ2
MAN2C1
NDUFS7
NUDT16L1
TOM1
CUL9
NME3
CLUAP1
COMT
DNLZ
PRKAA1
RABGAP1
CDH24
H1-4
DOHH
C17orf49
TRIM65
ZNF251
RBM4
DUS1L
MAML1
SRRT
USP21
BAG2
ASXL1
COX18
KLHL11
RPS19
MOV10
TUSC2
STYXL1
MDH2
NOP2
OSTC
GTF2H2
SPCS1
GLT8D1
GPAA1
ARF3
TCF3
GTF2A2
TNKS1BP1
RCOR3
PYGO2
LOC101928120
TMEM230
RHOF
H2BC5
ZNF76
PUF60
DERA
H2BC12
H2AC12
MDP1
H3C13
H2BC18
EIF4H
ZBTB4
POLR2A
MRPL40
HIRA
MAPKBP1
RPL27
HMCES
PPP4R3B
COX19
PMF1-BGLAP
PMF1
SMG5
DRG2
HSD3B7
MMP24OS
MMP24-AS1-EDEM2
RICTOR
BNIP3
ACTN4
FZR1
RCE1
EHMT1
METTL9
CDK16
DPY19L4
FBXW9
TUBGCP6
MAF1
DENND4B
RUVBL1
EEFSEC
FUT11
CCDC88A
MBD3
GFER
LMAN2
SLC50A1
ABCF3
PACS1
SLC39A13
TRIP13
BRD9
RPS15A
ROPN1L
PHLDA1
RARS1
PDCD6
H2BC17
H2AC17
CHD8
MXRA7
H2AC19
H2AC18
CXorf38
ANKFY1
SELENOO
DHPS
VPS4A
LRRC37A3
EGLN2
MFSD14A
DIAPH1
ENOSF1
RRAS2
JAG2
WDR24
ADAT1
MED26
GGA2
C8orf82
B4GALT7
TXLNA
GDI1
C7orf25
MTF2
PPFIA4
STYX
SURF6
RPL37
PITPNM2
ECHS1
RAB5B
FAM174C
NECAB3
RILP
IMPA1
WDR73
ALDOC
PSMD5
GPS2
H4C2
TMEM267
PWP2
LOC102724159
USP3
AURKAIP1
PIM2
SRRM3
TIGD3
C5orf15
SETD6
TMEM101
FAM189B
IFI30
TRIM52
B3GAT3
H3C2
BCAP29
ZBTB45
GAA
ADPRHL1
HOXA5
H4C8
MKRN2
NT5C
ZNHIT2
RAB26
SNAP47
TMEM150A
JMJD4
H4-16
SLC26A11
HSD17B8
CS
H2BC11
H2AC11
CPSF1
SMN2
SMN1
CENPBD1
C12orf73
H3-3A
PCBP2
CYB561D1
TSR3
GNPTG
TUBGCP5
NPAS4
JRK
ZNF276
VPS9D1
AGO3
NCBP3
COPRS
TMEM43
CHCHD4
MLLT1
ZNF131
TOR3A
VCP
ZSWIM8
PNKP
CYC1
CIAO3
FAM222B
RECQL4
LRRC14
COA3
CNTD1
H4C9
TAF10
ARSG
TOMM20
PPP1R37
FAM83E
EFNA4
WDR83
MAN2B1
TELO2
TEDC2
ADPRS
IFI35
VWA7
ATXN2
CTNNAL1
CYTH1
H3C4
H2BC7
H2AC7
NOL7
SLC39A3
RUFY2
SLC24A1
INKA2
DDX20
MIF4GD
NFYB
COPB1
STRIP1
C6orf47
CYBA
PAM16
WDR11
NUDT15
ATAD2
C7orf26
C17orf75
UBA2
TSFM
PDCD2L
TATDN3
NSL1
MIEN1
BAX
LRRC8D
PSMC3IP
BUD13
ANTKMT
RPL12
LRSAM1
NSFL1C
FBXL20
MTARC1
TSC1
GFI1B
INPP5K
SPOUT1
PEX12
SNRPE
RSAD1
TCF25
PDE4DIP
CDK11B
CDK11A
NELFB
MRPL12
ERCC5
NFAT5
SLC12A6
RGL2
MBTPS1
UBA52
PIP4K2B
ZNF35
TAF9B
ELL
TBCD
TMCO1
PPP1R15B
ITGB3BP
EFCAB7
CCDC97
CHUK
ARL6IP1
MRPS28
ABCA7
CLK3
H4C5
BICD2
ZNF451
MPG
KMT5B
FAM228B
SF3B6
TUT1
STX16
DHRS13
C16orf46
LENG9
TCHP
ZBTB22
ARMC7
BRWD1
MTHFS
SAMD1
WDR27
C6orf120
SFXN4
ANKRD40
KAT5
C16orf71
ANKS3
SF3A3
TIPIN
ATP7A
PTCD1
CPSF4
PSMG1
ANKRD12
SSBP1
VMAC
NDUFA11
PLK1
ATPAF1
UBE2Z
SP2
PCYT2
C8orf33
TAOK2
CNP
WASHC2C
ADI1
KIFBP
ZNF346
TAF2
MTREX
DHX29
C12orf57
TRIM41
OTULIN
AXL
CCDC24
SKA3
MRPL57
UHRF2
PRKRIP1
PRSS27
MRPL58
CLN6
HASPIN
NR1H3
ACP2
IDI1
TMEM222
LSG1
IARS1
NUF2
SLC25A17
DYRK1B
CSRNP2
CLPTM1L
GTSE1
DPP9
SENP1
PFKM
CDK5R1
FECH
ABTB1
ULK3
IREB2
POLD1
ZZZ3
QRICH1
TMEM223
SCAMP5
GTF2H2C
GTF2H2C_2
ARHGEF35
TRMT2A
RANBP1
AGL
CEP72
CCDC43
EXOC3
DNAJA3
SLC25A42
DCAF10
DDX56
STAT3
SEC62
TAF1D
C11orf54
MTRNR2L8
POM121C
SRA1
CHMP6
H3C8
PBLD
HNRNPH3
H4C1
H3C1
GTF2IRD2B
GTF2IRD2
MRI1
ROMO1
USP30
PPP4C
CD320
LRP6
MRPS23
ZDHHC8
THEM4
CASP2
PHKG2
CCNT1
PAFAH2
LOC100287896
LIPT2
ANAPC4
CCDC169-SOHLH2
CCDC169
RNF40
CCDC189
MARCHF7
AMACR
GEMIN7
PRKACA
EHBP1L1
INTS5
SSH3
NOC4L
DDX51
KMT2D
RNF187
MRPL44
MRPL55
TBL1X
PGM1
FIS1
TBC1D13
KDM3B
RFX1
GMPPB
ACTR8
MSTO1
FBXO31
MAP1LC3B
NOL11
NAXE
NXF1
DCXR
CLCN7
AHCY
ZC3H6
C6orf136
OGFOD3
HEXD
STXBP4
COX11
TSPAN10
NPLOC4
GPX1
GPN2
FRA10AC1
WDR70
NIPBL
TIGD6
HMGXB3
DMAP1
COQ7
KIAA2026
WDR47
MAPK1IP1L
YAP1
RASA4B
FAM207A
SMIM13
IL11RA
ELK1
CYB561
SUOX
SF3B4
DSTYK
SMARCD1
EEF2KMT
TTLL3
MBD1
RFC4
ST3GAL3
SCAP
SPSB2
RMND5B
RPS15
TRIP4
METTL2B
UBB
LUC7L2
RRP8
ILK
FAM219B
EIF4A1
GSTO2
TOB2
SDHA
CCDC127
CHST14
SCO2
SCFD1
TRIM37
ZNF513
IPO9
SLC35A3
NR4A1
MTERF4
MST1
NDUFA6
NDUFS6
LSM14A
MTIF2
SPAG5
RIPK1
MRTFB
ZNF668
ZNF646
ISG20
TVP23B
H2BC8
H2AC8
MADD
GRB2
SPRTN
EXOC8
WDR6
ZNF414
JPT2
ELK4
ARPC3
STX5
PDPK1
DIDO1
KANK2
COMMD2
EHD1
TFPT
PRPF31
ADNP
RABIF
SSRP1
TXN2
MOB4
ZMPSTE24
KDM4B
LLGL2
ARHGEF1
ZNF446
NEURL2
CTSA
LARP1
MRPS36
UNC119
DYNC2I2
SH3D21
ENDOG
PEA15
POMZP3
FARP2
TAB1
WDR55
SUPT16H
ZNF622
DNAJC14
CTSZ
AP2M1
NUB1
STRADA
ARNTL
TAS1R1
NOL9
POP5
EIF4G2
COQ3
METTL26
FAM20B
TOR1AIP1
DR1
RBAK-RBAKDN
RBAK
ZNF696
RHBDF1
LPCAT1
BANP
TMF1
KMT2A
TM2D3
SUGCT
MPLKIP
APPL2
ARL6IP4
SNX14
PSMD2
LTBP3
PYCR3
PABPN1
SH3BGRL3
GOLM2
URGCP
SEC13
SORT1
ABCA3
UBE2D4
MROH1
ST6GALNAC4
NDUFC2-KCTD14
NDUFC2
CELF1
PURA
VARS2
NBPF1
LRRC61
ACTR3C
NCKIPSD
AP5S1
ZNF398
YBEY
MCM3AP
NAA60
SIPA1
MTX1
LUC7L
SFT2D3
PHKA2
SFI1
NME1
HPSE
ARHGAP29
POR
MAPK14
NME2
SYT7
ATP6V0B
PDCL3
ZSCAN21
TTC26
RRM1
ATXN7L2
CBX2
HNRNPL
KPNA1
FOXRED2
CTXN1
PGAP2
SLC35D2
ZFAND1
H2BU1
H2AW
CZIB
E4F1
XPR1
DUSP3
TMEM14B
TMEM41A
GNE
ZNF787
RBL1
HP1BP3
TOMM6
C6orf89
ZNF554
PRDM10
DYNLRB1
PCYT1A
SERINC2
WDR36