ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
NSUN2
MAPKAPK5
DYNC1LI2
NVL
CACTIN
ICE1
NUP85
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
VDAC2
GOSR2
NCLN
REXO1
OAZ3
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
TAOK3
SUDS3
UBE2I
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
RWDD1
MRPS5
ACTR10
RBBP5
COX7A2L
VTI1B
PSMD1
DCTN1
CDC73
PES1
SEC61B
COMMD1
CCT4
SART3
ISCU
RABGGTB
HADHB
HADHA
UPF2
LYRM4
FARS2
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
MRPL11
PI4KB
SUPV3L1
NUP205
STAM2
SKP1
PNO1
MTRNR2L1
USP1
RPL21
ZRANB2
IER3
FLOT1
PAK1IP1
C6orf52
ATP5MG
PHF23
DVL2
SELENOF
HS2ST1
GOLGA5
B3GALT4
VPS52
RPS18
VARS1
GADD45GIP1
KRBA2
TAF9
RAD17
AK6
ANAPC7
PTGES2
SNAPC5
EIF2S3
RPS27A
CLHC1
PDHX
APIP
NFKBIL1
DDX39B
ATP6V1G2
AXDND1
MTRNR2L8
EIF4ENIF1
MRTO4
EMC1
SMC2
MAMDC2
PIN4
ZC3H10
RPL41
TTC8
RPL35A
IQCG
TMED1
ZBTB37
TM9SF1
RPS11
RPL13A
C6orf226
RPS23
ATP6AP1L
SLC3A2
VPS28
H4C14
PCBP1
ATP5F1E
ADK
AP3M1
H4C15
DPH6
SF3B3
COG4
SCRIB
H2BC4
H2AC6
OR6B2
NDUFA10
RXYLT1
SUMF2
AMDHD2
BICRA
SYCE2
RBKS
BABAM2
NRAS
MRPL38
H4C12
RPL22L1
H4C11
RPS12
GLRX2
DENR
UFM1
WDR74
XPNPEP3
ST13
DNAJB7
OAZ1
DGKZ
RPL17-C18orf32
RPL17
C18orf32
PYGO2
LOC101928120
FAM104A
C17orf80
APOM
BAG6
ARFGAP2
MPDU1
LOC100996842
CD68
CDK12
DDIT4
EDC4
RNF225
PAF1
MED29
MRPL24
GORAB
ARHGDIA
RPN1
PROSER1
NHLRC3
SYNRG
RBM39
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
H2AC19
H2AC18
HSPA1B
H4C3
H1-6
MTRNR2L2
MSH3
DHFR
GTF3C4
DDX31
H1-2
UBE2M
CHMP2A
DNAJC9
GET4
RPS2
NDUFB10
RNF151
H2BC21
H2AC21
H2AC20
RNASEK
C17orf49
H2BC5
H1-4
EXOSC6
PRKAG1
ABTB1
RGL2
JUNB
DDAH2
RPL12
SIRT7
LAMP1
INPP5E
RPS29
LRR1
SRSF11
LRRC40
ZNF34
RPL8
ZNF276
VPS9D1
TBCK
AIMP1
PHF1
CUL7
CMTR1
RPL7
RDH10
NDST2
CISD3
POLG2
STK36
RNF25
FAM131A
ZCWPW1
MEPCE
EPN1
PRRT2
PAGR1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNPY2
BNIP3
RIT1
TUBB
RPL10
LMAN2
VARS2
RHOT2
PRKRIP1
SPHK2
RPL18
FAM83E
RPS10-NUDT3
RPS10
C19orf53
ID3
SURF6
NAPRT
TRAP1
PFDN5
MYG1
ZBTB45
ZNF581
ZNF580
TTYH2
TSC22D1
BTBD10
TTC33
RAD23A
GPAA1
EXOSC4
ZNF383
PFN1
ENO3
RNF167
ATAT1
MSH4
TIMM13
RPL19
RRP36
MEA1
CCDC34
POLDIP3
TMEM79
SMG5
SEC11C
H2AZ1
DNAJB14
WDR90
RPL6
RICTOR
AGAP11
ADIRF
GCN1
ACP4
RPLP0
HOXA3
HMCES
SLC39A13
HOXA5
HOXA6
MOV10
ARHGAP11A-SCG5
ARHGAP11A
MMP24OS
MMP24-AS1-EDEM2
OSGEP
APEX1
C19orf71
DHRS11
TMPPE
GLB1
RPL13
CD320
RCOR3
ID1
CLUAP1
C16orf90
SECISBP2
POLR2J3
ARF3
SPCS1
GLT8D1
ECI1
POLD1
SF3A3
HES7
ALOXE3
FUT11
ARHGAP4
ROGDI
DPH7
TMSB10
NOP53
LRRC37A3
VWA7
ACTB
H4C8
PPARA
MRPL34
ABHD8
DDA1
SLC35E3
ATXN2
CENPBD1
LLGL2
H4-16
H2AJ
LRRC24
RECQL4
LRRC14
STYXL1
MDH2
GABARAP
MRPL53
SLC25A10
FTH1
H3C13
H2BC18
HDAC10
STUB1
JMJD8
GGA2
C8orf82
NAT10
JMJD7-PLA2G4B
JMJD7
CELF1
CD79A
SLC25A11
TRIP4
STRIP1
RHOB
POMZP3
TXNRD2
COMT
ZMIZ2
PSMD5
SCAMP3
EIF4A1
DHPS
WDR6
FAM174C
CCAR2
NDUFAF3
DALRD3
C8orf58
H2AC16
H1-5
CYBA
SLC26A11
TBC1D13
GPS2
MAZ
BAZ2A
NDUFS3
KBTBD4
SRRT
NDUFS7
NUF2
MAP2K2
LDHC
PUF60
ARHGEF1
COMMD2
TMEM107
PNMA1
H4C2
H3C2
H2AC4
RPL37
H2BC11
H2AC11
MRPL40
HIRA
GTF2IRD2B
GTF2IRD2
ADPRHL1
SLC39A7
RXRB
HSD17B8
RING1
CRELD1
SIGMAR1
ARID3C
H4C1
H3C1
H1-1
NOP14
GRK4
DRAP1
C11orf68
LIFR
SIX5
NECAB3
SELENOH
TSPAN10
NPLOC4
CDK11B
CDK11A
ABCB6
XRN1
PDCD6
ERCC1
GNG3
BSCL2
TUBA1B
DPY19L4
LRP6
CS
TCHP
C5orf24
TATDN3
NSL1
NPAS4
MAD1L1
RCE1
WDR70
SHMT2
MAPK8IP3
TMEM43
CHCHD4
SCAP
PAIP1
POLR2J
ARHGAP12
GRAMD2A
ZNF446
PIGO
AURKAIP1
ISG20
ZNF653
GPN2
GAPDH
ERGIC2
LBR
DUX4
HNRNPU
ZNF341
RNF166
CTU2
FLOT2
H4C9
ZFP36
CHD2
SDE2
PTPN6
C12orf57
C7orf26
ZNF770
SNX22
TAOK2
PMF1-BGLAP
PMF1
TRIP13
BRD9
SDHA
CCDC127
AKAP8
NXF1
DNAJB12
ABCF1
CCDC138
TMEM267
FBXW9
VPS50
HEPACAM2
KIF2C
NFAT5
NME3
MRPS34
EME2
NCBP3
THOC5
DIDO1
SMN2
SMN1
SCAMP5
SHTN1
SSBP1
ERCC6L2
CSNK1G1
H2BC12
H2AC12
CUL9
MATR3
ECHS1
LMLN
GOLM2
WDR47
TMEM39B
H4C5
H2BC7
CHD8
BCAP29
POLR2C
PCBP2
EHMT1
TMSB4X
PACS1
SLC39A1
CRTC2
GBA
RAB5B
C16orf46
COX20
ZDHHC23
RUVBL1
EEFSEC
ASXL1
MTF2
MARCHF6
CCDC43
TOM1
PURA
ANKFY1
ORAI3
SPATA25
NEURL2
CTSA
ARMH3
NELFA
GSTA4
CTNNB1
DSTYK
TOMM20
SMDT1
GRB2
LPCAT1
CCDC86
MYO18A
THEM4
IREB2
TRMT2A
RANBP1
ZNF511
TUBGCP2
SMIM29
EIF2D
NME4
DECR2
TXN2
GADD45B
SPATC1L
GAA
GPANK1
C6orf47
CSNK2B
MTIF2
RAB3IL1
OTUD7B
MEMO1
B4GALT7
ROPN1L
SKA3
MRPL57
TLCD1
NEK8
PTCD1
CPSF4
LRRC59
CDC5L
MDM4
DCXR
TAF2
SLC15A4
RMI1
HNRNPK
TCF3
AHRR
ADM
OSMR
NOLC1
CCDC78
DRG2
ANTKMT
NOP2
EXOC3
PDCL3
PRICKLE4
FRS3
ILF2
ATXN7L2
MAPKBP1
TUBGCP6
RAD9A
EIF3F
MRPS23
ULK3
CIRBP
SLC39A4
CPSF1
CYRIB
HYAL1
NAA80
HYAL3
PCBP4
CHD1L
NDUFB2
PRKAB2
NT5C
TRAF4
KRT8
TAS1R1
NOL9
KRT18
RAB26
TRAF7
SLURP1
RPS28
NDUFA7
FBF1
GPX1
TRIM37
RPP40
WDR31
ZNF286A
BRIX1
BHLHE40
NSFL1C
KLHL12
TGOLN2
ICMT
CLCN7
SLC29A1
TNFRSF12A
THOC6
HCFC1R1
JOSD2
ASPDH
MCOLN1
GSTO2
TSFM
TMEM139
CASP2
RNPS1
VEZF1
SNAP47
JMJD4
CALM1
KLHL15
MADD
AGL
AFF4
ZNF76
SLC50A1
DPM3
BAX
CLPTM1L
CYB561
GNE
ZNF583
TOMM6
GATD3B
GATD3A
USP21
CSRNP2
DCP1A
CD63
HASPIN
IRF9
SSX2IP
ANKRD13C
LTBR
ENDOV
NOTCH2
EIF4H
HMGB1
USPL1
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RSAD1
RIPK1
RPLP1
WDR11
PLEKHG2
MED1
MAN2C1
CCDC130
CEP350
AKAP1
H3C8
H2BC10
SLC45A4
PABPN1
UPF3A
CEMP1
FKBP5
ABCF3
RBL1
SIRT4
SNTB2
NOC3L
FIBP
CCDC85B
AGO3
SUGCT
MPLKIP
TMEM223
TMEM179B
RABIF
B3GAT3
AMZ2
GADD45A
ATAD2
KDM6B
FAM162A
CCDC58
TMEM170A
WASHC2A
IFI35
HNRNPA1L2
RPS26
PRSS8
CXorf38
PRDX1
CIAO3
NR4A1
FIS1
ATP6V1H
ENOSF1
DNAJC25-GNG10
DNAJC25
NAA60
MBTPS2
MLXIP
FAM156B
FAM156A
TMEM249
SLC52A2
FBXL6
H2BC8
H2AC8
BRWD1
LARP1
YAP1
TIPIN
SH3GL1
CHAF1A
KAT6A
SLC35B2
INPP5K
ZNF296
GEMIN7
CAPNS1
CBWD5
CBWD3
CBWD6
MTERF4
NOC4L
DDX51
DAGLA
ERBB3
SH3BGRL3
RASA4B
HAX1
YARS1
S100PBP
RRP1
MET
PGAM5
MRPS18C
HELQ
HSPB1
KMT2A
ZNHIT2
TONSL
AMACR
MRPL49
FAU
PBLD
HNRNPH3
GPRC5A
CLK3
FOXJ3
TRIM8
SCAND1
HIBADH
MVB12A
CCDC24
SRA1
MRPL28
P2RY11
TAB3
WDR62
THAP8
PPP6C
BMF
SGPP1
NUDT4B
NUDT4
VPS4A
RRP8
ILK
POLG
QRICH1
DDX56
ATXN1L
TMEM68
TGS1
STX18
TMEM222
GANAB
RPP21
GTF2H2C
GTF2H2C_2
YOD1
PFKFB2
TCTEX1D2
PPFIA4
CCDC106
RBM4
PUS7
NTMT1
DPY19L3
NADK
NUP133
TMEM101
SMPD1
PIP4K2B
DCAF10
MRPL58
CLCC1
ABCA3
FOXRED2
POP5
JUND
SUPT16H
HELLS
MTA2
H4C7
H3C7
H2BC9
MLX
COASY
STPG3
NELFB
RRAS2
JPT2
KIF21A
SNAP29
PI4KA
MRPL12
TSKU
TTC17
JRK
PPP6R1
ZBTB7A
NEK2
PMM1
C10orf143
TAF10
PDF
CNOT6
MED23
BANP
TBL3
SOCS3
ATF4
MROH6
SEC31A
FDX2
IPO9
CBX2
ADAT1
NANOS1
DENND4B
CCDC200
DNLZ
COX5A
SERTAD1
ZNF131
UHRF2
TMEM132A
MTARC1
ZFX
GGA1
BPTF
ZYG11A
LRRC8D
ARFGAP3
ZFP36L1
H3-2
TAF13
SLC24A1
COG2
UBE2J2
VCP
PSMG4
SPIRE2
AKIRIN1
ZBED3
ADGRL1
NAPA
IDI1
WDR37
TBL1X
HDHD2
CYBC1
KCNK1
TJP1
LUC7L2
FAM207A
SRSF4
GTF2A2
TM7SF3
BICD1
MRM1
PARVA
ZBED5
SNX29
L3HYPDH
JKAMP
C16orf70
ADAMTS10
MKRN2OS
MKRN2
RFX1
ZFAT
NFYC
PGAP6
ACTG1
CDK5RAP1
ARHGEF5
OTULIN
TJP3
TRA2B
MRPL45
MRPL3
CELSR3
TOR1AIP2