ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PMF1-BGLAP
PMF1
UTP25
DUX4
PEMT
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MTRNR2L8
MAMDC2
NME1
KIF5C
BAX
CCDC86
NME2
MLLT1
TRIM48
TRIAP1
COX6A1
SLC35E2A
ZNF485
NOC4L
DDX51
SLC35E2B
PHF7
BAP1
SNRPD1
FAM98A
COLEC11
UNC45B
NLE1
SSNA1
ANAPC2
AKAP10
SNX25
CFAP97
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
ZNF296
GEMIN7
P3H4
FKBP10
TBL1XR1
GTF3C4
DDX31
DHX33
TENT4A
NPM1
DRG2
GPS2
EIF5A
FAF1
CDKN2C
SRSF1
CWC25
TMEM248
MARVELD1
PCBP1
LSM12
G6PC3
IARS1
ZFP36L2
UBE2K
CBWD5
CBWD3
MTHFD1L
TET3
CBWD6
YBX2
SNRPE
RAN
HMGA1
AP5S1
DUS2
DPEP2NB
DDX28
RAD50
CLUAP1
C16orf90
MRPL3
NOC3L
SLC25A10
MRPL12
THOP1
SGTA
RBM42
SELENOO
ZNF639
COPS3
IGF2BP3
KCNQ5
PIGL
NCOR1
EIF3B
MAPKAPK5
CLCN7
EBNA1BP2
CFAP57
ADORA2B
PTDSS2
ANO9
NOP16
HIGD2A
MED9
SLC5A6
CAD
ATRAID
TMEM167B
ICE2
RPLP0
GCN1
DR1
CENPV
ZC3H3
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LARP1
USP22
DPH5
ABT1
MDN1
SYNCRIP
NCBP2AS2
NCBP2
PRR22
DUS3L
SPRED1
HNRNPF
ETF1
ZNF804A
FRA10AC1
CNBP
PIP4P1
OSGEP
APEX1
UTP4
DERPC
CHTF8
ZSWIM7
TTC19
UNKL
C16orf91
SNF8
SMYD2
UBFD1
EARS2
PWP1
NUDT1
MRM2
PBX2
GPSM3
PDCD11
ATP5MD
SECISBP2
CKS2
THNSL1
VMO1
PSMB6
GLTPD2
USP32
MAST2
PLD6
SNX9
MRRF
RRM1
PDS5A
TNRC18
LOC100129484
SLC35E1
ARSG
SLC25A33
MEF2D
MAP2K3
ZBTB44
KMT5B
LRP6
RTN3
ATL3
CELSR3
EEF2K
PLK3
TCTEX1D4
BTBD19
RCC2
POGK
KLF16
XPO5
POLH
EPRS1
PMS2
AIMP2
PPRC1
SYT5
SPTLC1
OSGIN1
WDR4
TBRG4
TAF5
METAP1D
GET4
CDC25B
TRAP1
NUGGC
ELP3
RPL10A
FNTA
PRKAR1B
SCAND1
GTF2H3
EIF2B1
COA8
BAG5
DNAAF4
CMSS1
NR1D1
RNF166
CTU2
IPO11
DIMT1
YARS1
S100PBP
CTU1
GPAM
PBRM1
GNL3
LONP1
CATSPERD
GOLIM4
PFAS
CTC1
FOXK1
MSTO1
HAX1
TOMM34
STK4
COX10
SAMM50
P2RX2
LRCOL1
HTATSF1
BRS3
ADPGK
NUMBL
EIF4H
MRPS17
SLCO4A1
RRP1B
HSF2BP
ASAP1
TIMM23B
PARG
NEURL4
ACAP1
SRRD
HPS4
GATAD2A
RALGDS
ELK4
NCOA5
DCP1A
TMEM38A
SMIM7
UTP18
MBTD1
PKN2
PRPF4
CDC26
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
CORO7-PAM16
CORO7
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
SMARCA4
BRICD5
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
FAM220A
VDAC3
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
CXorf38
PRMT2
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
BNIP3
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
ATP6V0E2
SAMHD1
FAM122A
NBPF1
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
EID2B
EID2
EHMT1
ABCF3
DAGLB
RABIF
TMEM250
NPRL3
UAP1L1
MAN1B1
FAM24B
LYRM7
HINT1
RPP38
ACBD7
THAP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
USP21
IFNAR1
NAGK
FAM71E1
EMC10
PPOX
SH3YL1
ACP1
MOK
CRTC1
ALKBH5
SLC2A11
TMED4
DDX56
XRCC2
INTS13
FGFR1OP2
PATL1
PITPNB
SUMF2
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
CBY3
RRP1
C1orf74
PPP1CB
YEATS4
PPP2CA
UFC1
RPL36
MICOS13
HSD11B1L
CDC7
WWP2
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
MRPS18C
HELQ
FADD
NELFCD
PTK2
TMEM141
CCDC183
SOD2
SPDYE6
LOC100289561
MAP2K2
DCAF8
MRPL45
PTPN4
SAFB
SAFB2
ZNF576
IRGQ
GPI
OARD1
NFYA
CHD1
FXYD3
RBM17
MRPL24
HDGF
OPA1
FUT8
MTCH2
TRIM37
SMG9
VPS13A
CACYBP
NANP
LAMP1
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRFAP1L1
BLOC1S4
OSCAR
NDUFA3
HP1BP3
RALGAPB
TOMM20
DYNC2I1
RTL10
GNB1L
POLR2J3
NUP50
TRMO
MSL2
GMCL1
DPF2
EIF2D
AKAP1
SNRNP70
CCNQ
TDP2
ACOT13
CCT5
ATPSCKMT
THAP5
DNAJB9
RPS2
RNF151
GDF5
CEP250
SPOP
SARS1
TRMT61B
SRRM1
EEF1AKMT1
TAX1BP3
EMC6
ACAT2
TOR1AIP2
TOR1AIP1
CRB1
CAPZA2
GATD3B
GATD3A
SPDYE7P
POM121
INTS7
DTL
ASNSD1
ASDURF
TMEM139
CASP2
PARK7
TBL3
THOC3
COP1
SMIM14
CALR
NAPG
PPME1
C2CD3
MAP1LC3B
FBXO31
GRB2
DHDDS
AP3B1
UNG
ALKBH2
LRFN3
RAD23A
PRR14
FBRS
SPDL1
ARFGAP3
DYRK1B
MRS2
PBLD
HNRNPH3
CCDC106
TBC1D5
TMEM209
SSMEM1
RNF149
SLC39A7
RXRB
RING1
HSD17B8
SHBG
FXR2
C6orf136
CDC34
USP10
STS
PUDP
WDR13
EPS15L1
U2AF2
XPO7
DOK2
PDXDC1
NUP214
UBE2M
CHMP2A
PAPSS1
TMEM70
ELOC
IPMK
CISD1
WDR74
STX5
NDUFA8
MORN5
RBAK-RBAKDN
RBAK
ZMYM4
HSF1
BOP1
C8orf48
COL11A2
SRD5A1
NSUN2
CDC20
NOXO1
ESRRA
CATSPERZ
WDR18
PRELID3B
USO1
TMEM104
NAT9
SMARCC1
TASOR2
SS18L2
SEC22C
ARPC2
ZNF638
PALB2
DCTN5
CC2D1A
C19orf57
ZNF664-RFLNA
ZNF664
CCDC92
TIGD1
EIF4E2
HINFP
MAGOHB
RSL1D1
SYS1
SUPT5H
RPS16
MTG1
DENR
MYL5
ATP5ME
TMEM63B
MRPL14
SCAF11
ERCC6L2
KIFAP3
TFB2M
CNST
THAP11
UROS
BCCIP
MORF4L1
MKNK2
TMEM43
CHCHD4
SLC25A11
RNF167
PFN1
TIGD6
HMGXB3
TRIP6
SRRT
GZF1
KCNN1
MINK1
TMEM63A
LEFTY1
ZNF34
RPL8
RPS7
CCDC93
AURKB
PPP2R3B
CYCS
C15orf40
ZBTB45
C5orf24
STYXL1
MDH2
GP1BA
SRCAP
LOC730183
MPC2
MAPKAP1
DCAF6
HAUS5
WDR43
TMEM109
PRPF19
CDC5L
GID8
DIDO1
DFFB
CEP104
POLR2J2
DSN1
POP7
EID1
ING1
CARS2
DLGAP4
ZNF517
NUDCD2
HMMR
MRM3
GLOD4
NBPF3
TOPORS
SMIM27
MRNIP
GOLGA1
SPDYE16
ALG8
HBS1L
GABARAP
TIA1
PCYOX1
POLR2J
TMED9
B4GALT7
PARP6
PUM2
NUF2
SKA3
MRPL57
BORCS6
AURKAIP1
FIP1L1
FZR1
DOHH
PUF60
JOSD2
ASPDH
CIAO3
PRDM4
PIAS4
PPAN-P2RY11
PPAN
ANGPTL6
CPLANE2
TFAP2A
C6orf89
TMX1
ENDOV
MBD1
CXXC1
PTBP1
TSEN2
ZZZ3
MAD1L1
PHF23
DVL2
AHCTF1
LINS1
ASB7
MAP3K7CL
CCT8
LANCL2
RFX1
UCN2
PFKFB4
TLX2
PCGF1
LBX2
UPF1
ZNF286A
CLPTM1L
MRPL21
IGHMBP2
B9D1
ZBTB14
STXBP4
COX11
COPB2
AASDH
WWP1
RPS29
WRNIP1
MYLK4
GPBP1
RPS11
RPL13A
ZBTB2
TIPIN
MIDN
CBARP
ATP5F1D
CFAP410
RPS19
MARCHF7
NAPB
RPRD2
TSACC
CCT3
TAOK1
TTC32
RNF32
MAK16
ATXN7L2
POFUT2
ATAD3A
WWOX
ZNF48
ZNF248
AMACR
ARHGAP35
AP2S1
KIF22
COASY
SLC15A4
C11orf80
PRKDC
MCM4
ANO10
ABHD5
TAS1R1
NOL9
NFXL1
SBNO1
NOP14
GRK4
C8orf37
PTPN21
NUP153
ARF4
PEX12
AP2B1
STX1A
BTBD10
ZFP91
LPXN
IQCC
DCDC2B
CCDC28B
TRAPPC9
TSSC4
VARS2
GTF2H4
PPP4R3B
DNMT1
PRPF39
PSMB2
CNOT4
TMEM79
SMG5
SIRT5
PGRMC2
UIMC1
KAZALD1
E4F1
ZNF692
CCNC
MLX
HSPA4
ZC3H14
CAPN7
POLRMT
FGF22
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
C2CD4A
PAOX
METTL22
ECHS1
TMCO1
EIF2S2
ABHD10
KDM3A
SPEN
DHX9
CENPS-CORT
CENPS
CCSER2
RBBP5
RPL27A
LHX9
C1orf53
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
SF3A3
TUBGCP5
INO80C
SREBF1
ATP5MC2
SRSF11
PPA1
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
TDG
C12orf73
EHD1
ZNF182
SPACA5B
SPACA5
ZNF329
TMED3
SMG7
SPG7
RBM39
NAT10
ELP6
VMAC
NDUFA11
ICMT
HES3
TIGD5
EEF1D
SLC30A5
XPC
LSM3
CD320
E2F6
ZNF652
NAA35
RPS6
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
NOL11
HSD17B1
PAPOLA
CLIP4
NAA38
THAP12
GVQW3
UBE2D3
ZDHHC12
CST6
TMEM120B
YIPF2
TIMM29
HEXIM1
UBR3
METTL5
ZNF771
RFC5
SPECC1L
CEP350
TAOK2
SEH1L
MATR3
QRICH1
DHX34
C5AR2
MTHFD1
SPAST
DLD
EIF1AD
BANF1
WDR73
NMB
PLEKHA8
FKBP14
NUP62
IL4I1
ATF5
KCTD13
ERGIC2
RPS28
NDUFA7
KATNIP
GTF3C1
ZNF473
VRK3
AKAP11
TRAPPC2
OFD1
UHRF2
CARNMT1
MRTFB
GPATCH3
ANKFY1
TRAM1
PURA
ARF3
ASXL1
PCIF1
CNP
RAB33B
TMEM88
CYB5D1
SH3GL1
CHAF1A
CBLL1
RNF130
MSRA
FITM2
SCAMP5
SF1
UBL4A
NKTR
TBCCD1
DNAJB11
BRD2
ZBTB21
PGAM1
MED1