ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
DUX4
PMF1-BGLAP
PMF1
MTRNR2L8
MTRNR2L9
GPAM
PEMT
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
KIF5C
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
CDKN2C
ZSWIM7
TTC19
TDG
C12orf73
NDUFS7
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
ATP6V0C
AMDHD2
TRIAP1
COX6A1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
NOP56
WASHC2C
CIAO3
UTP25
TMEM222
GGCX
POLR1F
CNOT6
COPS3
COMMD1
CCT4
EPRS1
UNC45B
NLE1
FLCN
AKAP10
HAUS5
GTF2H3
EIF2B1
RGPD2
RGPD1
ZMPSTE24
SLC39A3
WASHC2A
PMP22
ANKRD40
PCID2
CUL4A
RPLP0
GCN1
ADORA2B
RPS2
RNF151
TBL3
NOXO1
ITGB3BP
EFCAB7
DLST
TRMT61B
MAGOH
GET4
DENR
SRRD
HPS4
RBM42
TVP23B
SPRYD4
ABT1
ARSG
SLC16A6
ADPGK
RBBP5
EIF2D
JOSD2
ASPDH
ATXN1L
PIGL
NCOR1
RASD1
LSM12
G6PC3
RLF
FBXW8
MARCHF8
RNF166
CTU2
FRA10AC1
PRKAR1B
EED
CCNL1
COL23A1
TACO1
MPHOSPH10
MCEE
DPH5
MPRIP
GARS1
RAD54L2
THAP9
SEC31A
LANCL2
C8orf33
BAX
MRPL15
OTUD7B
CWC25
SUPT5H
RPS16
MRPL44
CENPV
NOXA1
TMED9
B4GALT7
LRRC37A3
SNRPD1
FAM227B
DTWD1
GID4
ATPAF2
PURB
MANBAL
DHX33
MTF2
NT5M
CLN6
PBX2
GPSM3
ACSF3
SF3A3
SLC39A4
CPSF1
IARS1
RANBP2
OR6B2
NDUFA10
LRRC59
NOP9
DHRS1
TOP3B
TTC4
PLEKHM3
AKIRIN1
MDN1
DPY19L4
ZNF770
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS16
DNAJC9
COX10
NUP54
RBM39
GTF2H2C
GTF2H2C_2
MRPL16
C2CD2
PLD6
CCDC57
TVP23C
PEX3
ADAT2
GNPDA1
FKTN
GLRX5
MNT
RPL6
PTPN11
MAGOHB
NUF2
TSR3
GNPTG
TMEM41A
YBX1
MRPL3
SUPV3L1
AHCY
DDX1
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
SLC31A1
FKBP15
ZSCAN22
TBC1D13
UBA1
CYCS
BTBD10
NMNAT1
LZIC
DGKZ
DCAF8
PMS2
AIMP2
POR
SRM
MYO9B
HAUS8
SLC25A33
UTP4
DERPC
CHTF8
PSMF1
PINX1
SLC5A6
CAD
ATRAID
TRIP4
PCLAF
SEC13
NFAT5
FRG2C
RAD50
POLG2
DDX5
CEP95
DUS2
DPEP2NB
DDX28
TIMM23
CRLS1
NFE2L2
METTL25
CCDC59
MED23
INTS12
GSTCD
SUMF2
GTF2H2
MKRN2OS
MKRN2
MRPL4
SLC39A13
PGAM5
FAM98B
MRPL55
NUDT9
TEX38
ATPAF1
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
C10orf95
STK10
EFCAB9
LSG1
SSU72
CLCN7
WDHD1
SOCS4
FAAP100
PARK7
TMEM262
TFDP1
SAR1B
YAE1
PEBP1
SAMD13
NOC4L
DDX51
TATDN3
NSL1
TBL1XR1
GOSR2
CALM1
GPHN
SH3GL1
CHAF1A
DCP1A
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
ACAP1
SLC25A40
DBF4
PSMG3
SMYD4
RPA1
CYREN
ZNF18
AP5Z1
SPATC1L
NCBP3
CYP20A1
TRIP13
BRD9
CSNK1G2
ZNF639
TRIM25
ZFAND3
TAF4B
TIMM23B
PARG
ZNF286A
PBK
PPRC1
USP15
OAZ3
DNAJC11
VSIG10
PDS5A
STXBP4
COX11
FRG2
EIF3B
USP32
RHEBL1
KMT2D
VPS37B
DHX40
TMA7
CCDC51
ATRIP
ZNF800
NBPF1
ETV3
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
CORO7-PAM16
CORO7
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
SMARCA4
BRICD5
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
FAM220A
VDAC3
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
CXorf38
PRMT2
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
FAM98A
BNIP3
VPS26B
NCAPD3
LONP1
CATSPERD
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
XPO5
POLH
ATP6V0E2
SAMHD1
FAM122A
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
EID2B
EID2
EHMT1
ABCF3
DAGLB
RABIF
TMEM250
NPRL3
UAP1L1
MAN1B1
FAM24B
LYRM7
HINT1
RPP38
ACBD7
THAP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
USP21
IFNAR1
NAGK
FAM71E1
EMC10
PPOX
SH3YL1
ACP1
MOK
CRTC1
ALKBH5
SLC2A11
TMED4
DDX56
XRCC2
PATL1
PITPNB