ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX481566 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◣ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

WDR74
MAMDC2
MTRNR2L1
MTRNR2L9
EMILIN2
MTRNR2L8
TRIM48
MUC3A
MTRNR2L2
MSH3
DHFR
OR2T1
LINGO1
EPN1
LGR6
GOLM2
RGPD2
RGPD1
MTRNR2L10
OPRL1
LKAAEAR1
SPAAR
DUX4
TMEM107
COL23A1
MTRNR2L6
UNC45B
PMF1-BGLAP
PMF1
CRYAA
CRYAA2
HEXIM1
FCMR
KISS1
CAMK2B
CCDC200
DDAH2
C1orf53
PAXBP1
PUS10
PEX13
OSGIN1
RIN1
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
TUBD1
RPS6KB1
FAM220A
PRRT2
VDAC3
PAGR1
MVP
KHDRBS1
ENTPD6
POLA2
SDHA
CCDC127
CXorf38
PRMT2
APOLD1
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
FAM98A
BNIP3
VPS26B
NCAPD3
LONP1
CATSPERD
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
XPO5
POLH
ATP6V0E2
SAMHD1
FAM122A
NBPF1
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
ABCF3
DAGLB
EHMT1
RABIF
NPRL3
MAN1B1
FAM24B
RPP38
THAP7
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
EID2B
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
TMEM250
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
IFNAR1
NAGK
FAM71E1
EMC10
SH3YL1
ACP1
ALKBH5
SLC2A11
XRCC2
CRTC1
INTS13
FGFR1OP2
PATL1
PITPNB
SUMF2
LOC100287896
LIPT2
KDM8
RCBTB2
MAP2K7
CBY3
RRP1
C1orf74
PPP1CB
YEATS4
PPP2CA
CDC7
MOK
TMED4
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
MRPS18C
HELQ
FADD
NELFCD
TMEM141
CCDC183
LOC100289561
SOD2
MAP2K2
PTK2
DCAF8
MRPL45
PTPN4
RPL36
HINT1
WDR4
SAFB
SAFB2
ZNF576
IRGQ
USP21
OARD1
NFYA
CHD1
RBM17
OPA1
FUT8
MTCH2
TRIM37
NPM1
SMG9
SRSF1
SSNA1
ANAPC2
BRICD5
VPS13A
CACYBP
NANP
LAMP1
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRPL24
OSCAR
NDUFA3
THOP1
SGTA
HP1BP3
RALGAPB
TOMM20
RTL10
GNB1L
CCDC86
POLR2J3
NUP50
TRMO
MSL2
GMCL1
DPF2
EIF2D
AKAP1
SNRNP70
CCNQ
NME1
TDP2
ACOT13
CCT5
ATPSCKMT
THAP5
DNAJB9
SPOP
SARS1
TRMT61B
EEF1AKMT1
ACAT2
SRRM1
TOR1AIP2
TOR1AIP1
BLOC1S4
TAX1BP3
EMC6
CRB1
CAPZA2
GATD3B
GATD3A
POM121
INTS7
DTL
DYNC2I1
ASNSD1
ASDURF
TMEM139
SLC35E2A
CASP2
GDF5
CEP250
NOC4L
DDX51
PARK7
THOC3
COP1
SMIM14
GPAM
PPME1
C2CD3
FBXO31
NAPG
GRB2
DHDDS
AP3B1
UNG
ALKBH2
LRFN3
RAD23A
FBRS
SPDL1
ARFGAP3
DYRK1B
SLC35E2B
PBLD
HNRNPH3
TBC1D5
TMEM209
SSMEM1
RNF149
HSD17B8
MAP1LC3B
SHBG
FXR2
C6orf136
CDC34
USP10
STS
PUDP
MRS2
WDR13
EPS15L1
U2AF2
XPO7
PDXDC1
NUP214
UBE2M
CHMP2A
PAPSS1
TMEM70
ELOC
IPMK
CISD1
NDUFA8
MORN5
RBAK-RBAKDN
RBAK
ZMYM4
HSF1
BOP1
C8orf48
SLC39A7
RXRB
SRD5A1
NSUN2
EIF5A
TBL3
ESRRA
CATSPERZ
WDR18
PRELID3B
USO1
TMEM104
NAT9
CWC25
SMARCC1
TASOR2
RBM42
SEC22C
ARPC2
ZNF638
PALB2
DCTN5
CC2D1A
C19orf57
ZNF664-RFLNA
ZNF664
CCDC92
TIGD1
EIF4E2
MRPL55
UTP25
PEMT
HINFP
MAGOHB
RSL1D1
SYS1
MTG1
DENR
MYL5
ATP5ME
TMEM63B
MRPL14
SCAF11
ERCC6L2
KIFAP3
TFB2M
CNST
UROS
BCCIP
MORF4L1
TMEM43
CHCHD4
UTP18
MBTD1
TIGD6
HMGXB3
GZF1
KCNN1
MKNK2
MINK1
TMEM63A
RPL8
RPS7
CCDC93
PPP2R3B
CYCS
C15orf40
ZBTB45
C5orf24
STYXL1
MDH2
SLC25A11
RNF167
SRCAP
LOC730183
MPC2
MAPKAP1
DCAF6
HAUS5
WDR43
CDC5L
TENT4A
GID8
DIDO1
DFFB
CEP104
POLR2J2
DSN1
POP7
DLGAP4
EID1
NUDCD2
HMMR
MRM3
GLOD4
NBPF3
TOPORS
SMIM27
MRNIP
GOLGA1
ALG8
HBS1L
POLR2J
SCAND1
PARP6
PUM2
NUF2
SKA3
MRPL57
TRIAP1
AURKAIP1
DRG2
FIP1L1
PUF60
JOSD2
ASPDH
ING1
CIAO3
GTF2H3
EIF2B1
MAPKAPK5
CBWD5
PRDM4
PIAS4
TIA1
NR1D1
CPLANE2
CBWD3
C6orf89
TMX1
ENDOV
PTBP1
TSEN2
ZZZ3
PHF23
AHCTF1
LINS1
ASB7
RPL10A
MAP3K7CL
CCT8
MBD1
LANCL2
RFX1
PFKFB4
PCGF1
LBX2
UPF1
ZNF286A
CLPTM1L
MRPL21
IGHMBP2
B9D1
ZBTB14
STXBP4
COX11
COPB2
CBWD6
AASDH
WWP1
RPS29
WRNIP1
NOP16
HIGD2A
GPBP1
ZBTB2
TIPIN
CBARP
ATP5F1D
CFAP410
RPS19
MARCHF7
NAPB
RPRD2
FAF1
TSACC
CCT3
TAOK1
TTC32
RNF32
MAK16
POFUT2
ATAD3A
WWOX
ZNF248
PCBP1
AMACR
ARHGAP35
KIF22
ZNF34
SLC15A4
C11orf80
PRKDC
MCM4
ANO10
ABHD5
TAS1R1
NOL9
NFXL1
SBNO1
NOP14
GRK4
C8orf37
NUP153
ARF4
PHF7
BAP1
BTBD10
ZFP91
LPXN
IQCC
CCDC28B
SRRT
TSSC4
PPP4R3B
DNMT1
FZR1
PRPF39
PSMB2
CNOT4
STX1A
TMEM79
SMG5
SIRT5
PGRMC2
UIMC1
KAZALD1
ZNF692
CCNC
MLX
COASY
HSPA4
ZNF296
MAD1L1
GEMIN7
ZC3H14
ADPGK
CAPN7
POLRMT
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
AP2B1
METTL22
ECHS1
DCDC2B
TMCO1
EIF2S2
ABHD10
KDM3A
SPEN
DHX9
CENPS-CORT
CENPS
CCSER2
RBBP5
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
SF3A3
TUBGCP5
INO80C
SREBF1
ATP5MC2
SRSF11
DCP1A
GABARAP
PPA1
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
EHD1
ZNF182
SPACA5B
SPACA5
TMEM109
SUPT5H
ZNF329
TMED3
COPS3
SMG7
SPG7
RBM39
NAT10
VMAC
NDUFA11
LSM12
G6PC3
TIGD5
EEF1D
SLC30A5
XPC
LSM3
CD320
E2F6
DVL2
ZNF652
NAA35
RPS6
ICMT
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
ELP6
NOL11
PAPOLA
CLIP4
NAA38
THAP12
GVQW3
UBE2D3
TMEM120B
MED9
YIPF2
TIMM29
UBR3
METTL5
RFC5
SPECC1L
RNF151
CEP350
TAOK2
SEH1L
MATR3
QRICH1
DHX34
MTHFD1
PGP
SPAST
DLD
EIF1AD
BANF1
WDR73
NMB
PLEKHA8
FKBP14
NUP62
IL4I1
ATF5
KCTD13
ERGIC2
RPS28
NDUFA7
KATNIP
GTF3C1
ZNF473
VRK3
AKAP11
TRAPPC2
OFD1
ZDHHC12
UHRF2
CARNMT1
SNX25
CFAP97
MRTFB
RPS11
GPATCH3
ANKFY1
TRAM1
ARF3
ASXL1
PCIF1
CNP
RAB33B
TMEM88
CYB5D1
SH3GL1
CHAF1A
CBLL1
RNF130
MSRA
FITM2
SCAMP5
SF1
NKTR
TBCCD1
DNAJB11
BRD2
ZBTB21
PGAM1
CSDE1
RFXANK
BORCS8-MEF2B
BORCS8
ZSCAN22
CAND1
SMIM10L1
PRH1-TAS2R14
PRH1
ACAD9
PIGF
CRIPT
LAGE3
LIG4
COX6A1
ABHD13
MRRF
DUS2
DDX28
RPL17-C18orf32
RPL17
NCOA4
ERCC6
CEP20
UGGT2
ARMC2
FSIP1
ZNF526
IPO11
SCML1
PURA
LRPAP1
MYO9B
HAUS8
ASCC1
ANAPC16
PDCL3
EXOSC10
ZMYM1
PRDX1
APC
MARS2
APTX
GAS8
DBNDD1
FANCD2
SLC35A4
APBB3
PPP5C
S100A13
CHTOP
LSG1
EED
PTTG1IP
TAB3
CLN5
SPRYD4
MBD3
SNRPB2
CC2D1B
ATF2
TERF2IP
KARS1
CDK12
ETFA
BTF3
TSPAN10
NPLOC4
TBK1
EIF4A3
DMAP1
CCNI
CIPC
FAM227A
CBY1
EIF5
SEC14L1
THADA
UQCC1
TTLL9
TMEM101
MAP3K7
RPL27A
COX18
PDCD6IP
ATP6V1C1
GFPT1
STX16
PSMA2
GOPC
DBR1
YIPF3
POLR1C
IBA57
CLASP1
PPAT
PAICS
GABPB1
GAA
DARS1
KDM6B
ZKSCAN2
UPF2
ATP6V1G1
ZNF747
SELENOT
MPHOSPH6
RPS6KB2
FAM149B1
ECD
SHPRH
DHX37
BRI3BP
FKBP1A
PTCD3
POLR1A
MMAA
NOL7
SRPRB
RBM7
C11orf71
MDH1B
FASTKD2
IREB2
ALAS1
SPC24
NDUFA6
FAM135A
RBBP7
SDF4
PUSL1
B3GALT6
ACAP3
TRPM7
SNRPD1
SLC26A8
MAPK14
SEC61G
PAIP2
NFYC
TIMM13
TRIM46
KRTCAP2
PSMD5
SNRPC
ZHX3
POLDIP3
RCC1
RLF
NDUFS3
KBTBD4
SPEGNB
GMPPA
C16orf91
TMEM127
CIAO1
VARS2
ATXN1L
KIAA1191
ARL10
MED4
TRNAU1AP
CFAP70
PVR
ARF1
DNTTIP2
MMS22L
RPP14
HTD2
KCNAB3
CNTROB
SUGP1
MAU2
ANGEL2
HNRNPU
MAP4K1
EIF3K
CCDC77
SLC12A2
PPM1G
CCDC150
SPDYE14
SPDYE10P
EFHC1
SEC62
DDX19A
GRWD1
MAST2
TMED9
ZSWIM7
TTC19
GPATCH8
CCNT1
DNA2
C2orf74
AARSD1
CYRIB
GTPBP10
RAB1A
ABCB10
EID2
RBM15
TTC37
ARSK
SLC39A4
CPSF1
ARRDC3
SRP19
ERLIN2
DDX42
CCDC47
PHF14
SIRT6
ANKRD24
AIP
TATDN3
PWP1
NSL1
NADK
BSN
STRIP1
SPATS2
PINK1
ADAM10
RRM1
MEAF6
RPS15
NDUFS7
DNAJC25-GNG10
DNAJC25
SEPTIN7
FAM76A
MBTPS1
IFT172
METTL25
CCDC59
MRPS7
GGA3
HSBP1
DTX2
PXMP2
POLE
NCBP2AS2
NCBP2
KIN
ATP5F1C
MLH3
ZFAND3
DAZAP1
THAP1
ITGB3BP
EFCAB7
MRPS25
NOP9
DHRS1
SPTLC1
MRPL44
RBPJ
MED1
GDI2
UBN2
TTC23
LRRC28
SSH1
ZNF251
GNPTAB
SCGB1C2
SCGB1C1