ChIP-Atlas: Target genes

Potential target genes for CBX4

Query protein: CBX4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4389612 | Mesenchymal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CBX4's Target genes

◢ CBX4: Average

◢ SRX396289: 293

◣ SRX4389612: Mesenchymal stem cells

◢ SRX4389613: Mesenchymal stem cells

◢ CBX4: STRING

ZFX
RAX
PRDM2
IQSEC3
ZNF32
DMTN
SUSD1
INO80D
FAM160B1
RNF169
C11orf95
NAE1
AP5B1
ZNF22
SIK1B
SIK1
UBE2L3
URGCP-MRPS24
URGCP
TBCA
RBM15B
RAC1
LRRK1
USP24
NPAS4
CPLX2
TOP2B
GPX7
SOCS6
SNX9
HTR5A
CCDC149
ZNF746
AMPD3
ARPP19
SCRT1
SETD2
UQCRFS1
UPF1
H6PD
TM9SF3
EXT1
DENND6B
CPSF6
SMPD2
PPIL6
ZMYND11
LEMD2
ZNF518B
CYB561
TXNRD3
SRF
PAIP1
HMGN1
ZNF319
USB1
MAP2K4
NKX1-1
TRIM44
SURF4
KLHL35
CNIH1
GPCPD1
BRD1
REXO1
NCOA6
MTMR10
SENP6
AGO2
ZNF282
FAIM
ADGRA3
PDXDC1
FAM47E-STBD1
FAM47E
EIF4H
UBE2J1
SNX25
USP25
RNF135
EPM2A
EEF1A1
PARD3B
HHIPL1
NDFIP1
FNBP4
PLXNB2
SPAG6
B3GNT5
HECTD1
SEPHS1
KHNYN
CBLN3
ZNF532
NRF1
ZDHHC1
FRAT2
PERP
THAP3
SIM1
BTF3
NFKB1
ENO1
H1-0
GCAT
GCLM
FAM169A
ZC3H12C
RIN3
RDH14
ATP9B
ODC1
MAPK8IP2
RCC2
ATXN10
ZNF239
PSKH1
VCP
ZCCHC3
AFG3L2
CLIP4
CRPPA
TMEM268
VPS36
CKAP2
NCOA5
NT5C3A
GRIN2D
NCOR2
DUSP16
FBXW4
TGFBRAP1
ZXDB
KMT5B
REEP3
JMJD1C
SNAP25
KDM3B
UXS1
USP22
HTRA1
EML1
DYRK2
TARDBP
CHPT1
NUAK1
PHRF1
GTF2IRD2B
GTF2IRD2
SSH1
DENND1B
CUL1
GSK3A
NIPSNAP2
ATP11B
XRN2
QSOX2
GGACT
USP3
NR1D2
NKIRAS1
SDF4
B3GALT6
ZNF469
RTL6
LAMC1
SESTD1
NINL
CCDC88C
RAB32
GMEB2
USP14
TSPAN10
NPLOC4
TDRD3
RITA1
DDX54
CYB5R3
CELSR3
EFHD2
ZNF12
KDM4B
VSX2
ARL8A
AVEN
VHL
KATNBL1
FBXO30
ELAC1
DCHS1
EFR3A
SFPQ
PRXL2C
DUSP2
MIDEAS
LRRC4
PRDM5
PARVA
PRTFDC1
COMMD7
CITED4
YTHDF2
B4GALT5
ERMARD
SKP1
SHOC2
PRRC2B
PER2
MARCHF5
EIF3B
CPEB3
CCDC85C
BBIP1
RCN1
AKAP7
HNRNPR
ACSL3
ATXN7L3B
KDM2A
JAK1
BAZ1B
TRIP13
RAPGEF1
POMT2
JHY
GSTZ1
BRD9
LARP1B
DUSP8
TBC1D9
HDDC2
GNA12
RBBP6
SLC36A4
SENP5
RAB22A
TRIM52
SNX19
SLTM
CRTC3
TLK2
VDAC1
INSM2
VPS54
SSU72
MAP3K20
KLHL23
KIF13A
KAT6A
ING5
HMGB1
POPDC3
JOSD1
GTPBP1
TUB
RASSF8
HSP90AA1
RHEB
DCTD
SCARB2
DICER1
RDX
FRAT1
PTGFRN
KLHL9
EDF1
KIAA0232
TIRAP
RTBDN
RESF1
DVL3
HINT1
NCOA7
XBP1
TRAM2
FIBP
CCDC85B
PKD1
PTP4A2
CHD1L
NCKAP1
XKR7
SIMC1
WDR90
MARK2
ILKAP
SETD1B
WWC2
TPM4
SEC24B
RNF217
PTPN9
PPM1M
PM20D2
PEX6
P2RX4
ITCH
RYK
ZNF292
RAN
KLF7
DHRS12
CCSER2
ARHGEF11
KCMF1
GPR150
TLCD5
IBA57
E2F5
NAA25
LACC1
CCDC122
SETX
PTOV1
PRDM10
NTM
DNM1L
CKAP5
AADAT
APBA2
RGCC
ZNF326
RFX3
MAD2L2
HERPUD2
EFS
DRAXIN
BRD4
GLIPR2
WHAMM
TMED10
IQSEC1
IGFBP4
FSD2
EIF2D
CKS2
PLPP2
ZNF362
ZNF236
WDR45B
GRIN1
CBX4
BFSP1
NR4A1
DUS1L
TMEM62
REV1
NIT2
NFATC1
LIMD2
GSC
ALDH1A3
LRRC47
ZNF639
VPS4A
USP47
TMEM275
SLC22A23
MAML1
CMPK2
SUCLG2
RBAK-RBAKDN
RBAK
C1orf53
ADGRB1
FAM168B
STK25
FOXN3
CENPV
SPACA9
AK8
WDFY3
POGLUT3
CDV3
CCDC170
ADCK2
C2CD4B
B4GALT6
TMED8
SECISBP2
SAMD15
MANSC4
KLHL42
HDGF
BCL2
SOWAHC
SEPTIN10
NRIP1
HNRNPA3
GGPS1
ETV3
EIF4G1
CHST10
ARID4B
PGLS
UBR3
UBE2J2
SNTA1
RNF103
NEURL1
MTHFS
METTL5
ARRDC4
YTHDC1
U2AF1L5
U2AF1
TCERG1
SCYL1
PON2
MAP6
CRTAP
SCMH1
TAPT1
SMO
PSD3
NPR2
NAP1L1
FAXC
PDCD7
ZSWIM7
USP6NL
TTC19
RHOBTB1
LITAF
IQCE
AGPAT3
UQCRH
LRRC41
C4orf36
TET3
ZSCAN1
ZC3H7B
UBE2R2
TBC1D9B
SRSF4
SPART
RANGAP1
PATJ
IDUA
CHAF1B
TEDC1
RNPEP
NUDC
HIPK1
ELAVL1
CRIP1
ARNT2
ANKRD52
TES
ZFAND6
SGMS2
PHF20
NEMP2
LSM14A
KCNG1
DDX59
CEBPG
RNASEH2B
CUL3
CRIP2
ZFYVE9
SIK3
AFF4
SYNJ2
NCK2
MICALL1
LIMS1
FBXL5
CERS2
NFYB
TMTC4
TAOK1
SHROOM1
MBTPS2
LIG3
TWSG1
SRSF6
SLC39A10
HESX1
ELK4
DENND1A
CKAP4
C10orf95
APPL1
ARIH1
TMEM106B
ZC3H14
ULK2
TTC36
RYBP
NUDT4B
NUDT4
MTDH
MTA3
HHEX
FBXO48
APLF
AMIGO1
AKIRIN1
ZFAND5
POLG
TMEM185B
TEX46
RAPGEF2
PTPMT1
PRRX2
PHC2
ME2
KDM1A
CELF1
CCDC184
HGSNAT
ZNF398
UNKL
SRRM2
FAM53B
ZNF302
TSPAN3
SLC7A6
SLC4A3
PPP1R3D
PGAP4
FAM217B
SFT2D3
SDHAF2
CPSF7
TET2
SMIM10L1
SGPP1
PRH1-TAS2R14
PRH1
MAFF
LONP2
INPP1
ERI3
DYNLRB2
CMTM4
AKT1
ABCC11
FBXL17
TMEM117
TCAP
SLC25A24
SCRT2
RHOB
RALGDS
PNMT
KLHL2
DOCK7
BMPR1B
ZBTB24
WWP1
SNX4
RGPD2
RGPD1
MAP2K2
MACROH2A1
FBXL2
FBXO31
KIF1B
KDSR
DGKE
C17orf67
TADA1
SRXN1
SETD3
MAP10
GATA6
CCNK
ZNF606
CASD1
ATP6V1FNB
STAU1
RNF180
IREB2
HSD17B12
HECTD2
GTF2I
EXOSC6
DBN1
TMEM255B
CDC16
TRANK1
SYT14
DHX30
CHGB
LETM1
KIAA1614
PACS2
CDC14B
BRF1
SPPL3
SEPTIN2
PXDN
NRBP1
HDLBP
BPNT2
ATL2
IMPACT
VPS16
SARAF
PIEZO1
PCED1A
OTUD1
MAN1A2
CTSO
CEBPD
ARFGEF2
ANKHD1-EIF4EBP3
ANKHD1
UHRF1BP1
LRRC37A3
ZNRD2
ZDBF2
TMX4
SCLY
LPAR1
IRF2
GRSF1
FAM89B
EHBP1L1
COPZ2
ANKRD54
SLC9B2
SMAD4
RC3H1
FRG2C
SLK
TNPO1
TMEM71
RNF215
PPFIA1
PHF20L1
OBSL1
OAF
NSMAF
KLF6
INHA
DNPH1
ARHGEF10L
ACVR2B
ZFP64
UNC50
NFIA
KIFC3
FZD6
CTNNA1
COA5
TPPP3
PHF3
HSPA12A
FZD1
C16orf72
TBL2
RPL6
PTPN11
MYEF2
MFSD14A
IGF2R
DYNC2I1
CTXN2
C21orf91
ATE1
TXNDC5
RELB
PXDC1
PRNP
OARD1
NFYA
LRRFIP1
HNRNPU
HEXB
HEG1
GABPB1
DTD1
CREBZF
CMPK1
ARHGEF7
CEP170B
NDEL1
ZNF423
UBE2Q2
TMEM80
RBM17
RAB18
P4HA2
KPNA1
GYPC
FOXK2
FAM20B
DEAF1
CDHR2
AP3D1
ADO
SETD7
XPO6
SOGA1
PRELID3A
PITHD1
PINK1
NSD1
GRIA2
AGK
AEN
ABCC1
ATP1B3
ZNF75A
TIGD7
SACS
RAB4A
PREX1
PHOX2A
MRPL23
CREM
ZNF354C
YWHAB
VTN
TRAPPC3
SARM1
REPS1
PPIA
NTMT1
MIOS
MAP7D1
GIGYF2
CNBP
CD276
CCNJ
C9orf50
UBE2E3
TLX2
SKI
RAB11FIP3
ECPAS
BRD7
DNAH14
TRIM47
TNKS2
SLC22A5
RPLP1
OAT
NOX4
ME3
MCL1
FAM171A1
EPHA10
CYLD
CPQ
MAPKAPK5
UBXN4
TBCEL-TECTA
TBCEL
STXBP5
SIAH1
SH3D19
RRP1B
LRP11
HTRA3
HSF2BP
HIPK3
HES4
DPYSL2
DDHD2
REST
SOCS1
RAI1
NAXD
LAMP1
TRIM39-RPP21
TRIM39
ZNF839
YBX1
STRN4
SMCHD1
RNF144A
RNF10
RAD23B
OGFOD3
KLHL5
HEXD
GLI4
FKRP
FBLIM1
DMWD
DENND10
CYP4V2
CNOT11
C7orf25
AMER3
ZFP69
SINHCAF
ACSF3
ANP32B
TMEM200C
SNX24
PRKAR1A
MEX3D
FOXC2
FAM160B2
CNOT6
AMFR
UBE2H
SPAG1
SMOX
RHOD
PDCD5
JAZF1
IQANK1
GRK6
FAM83H
CLN6
CAMTA1
ARIH2
KDM5C
GNB1
TMEM115
SMURF2
SLC12A7
SEC24D
SASH1
RAB37
PPP4R3A
PPP1R35
KTN1
INPP5E
GPR157
FBXO6
FBLN1
CCDC117
ARMC4
APPL2
AP3M2
TRAPPC6A
SOS2
POGLUT2
PLIN2
MANF
FHL2
FEM1B
CAPN7
C15orf61
C14orf132
BLOC1S3
BIVM
UBTD2
UBE3A
SNED1
HDHD5
GNAQ
ERCC1
DDAH1
DCBLD2
CHST3
CCN1
SLBP
SEC31A
PDCD2
PBRM1
MXD4
MORC2
GNL3
CHFR
CALHM6
ZMYM4
TMEM171
SOX11
SLC30A5
SLC25A43
SLC25A28
PEBP1
NINJ2
LMO7
LGALS3
GRB10
GORASP2
TMEM131
SNTB2
SIGIRR
PDE4A
HECW2
DENND6A
CYP11A1
BNC1
SLC25A33
ITSN2
WDR43
TNRC6A
TEX10
SMAD5
GLRX3
CYP2U1
CHMP4B
CDK14
RAB11FIP5
ZNF800
USP7
PHF2
LRP3
GREM1
DEGS1
BRPF3
ZNF623
VSTM4
TMEM250
LPP
KLF9
HEPN1
FAM53A
DIDO1
LRP5
ZNF777
NETO2
CLCN7
AGO4
WRNIP1
RGMB
PACSIN3
MYLK4
WASF3
TXNDC15
TACC2
SNRK
SMYD2
SH3BP4
PRDM4
PNMA1
PCBD2
NSFL1C
NME6
MGRN1
KDELR2
HMGA2
FBXO4
ERAP1
DPYSL4
BOC
ATP13A3
MAP1LC3B
H2AX
FOXD1
YES1
STK17A
SPIRE1
SMARCC1
SCAF11
RWDD3
PSMG2
PHYKPL
OTUD4
OLA1
MRAS
HMCES
GNB4
FKBP5
FKBP4
CCN2
CCDC57
BCAP29
ASB1
ARNTL2
TATDN2
SNX30
SLC2A10
NEK3
MSRB2
MFSD14C
IL17RC
CUL5
CCDC91
C5orf24
HPS6
YPEL5
TPRA1
ST7
RRAS2
PITPNM2
OGFRL1
MAP4K5
GDI2
GALNT7
CLIP1
ATL1
TRAF3IP1
SLC25A13
RCN2
PURB
INSR
HENMT1
H2AB3
H2AB2
H2AB1
GATAD1
FAAH
F8A3
F8A2
F8A1
F8
EDEM1
CDR2
CCNA1