ChIP-Atlas: Target genes

Potential target genes for XRCC4

Query protein: XRCC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4192136 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
XRCC4's Target genes

◢ XRCC4: Average

◢ SRX150504: K-562

◢ SRX4192131: MCF 10A

◢ SRX4192132: MCF 10A

◣ SRX4192136: MCF 10A

◢ SRX4192137: MCF 10A

◢ ERX177102: U2OS

◢ ERX177103: U2OS

◢ XRCC4: STRING

PMF1-BGLAP
PMF1
RBM42
TBL3
RNF151
RGPD2
RGPD1
TRMT61B
MTRNR2L8
LRRC29
MTRNR2L1
TRIAP1
CWC25
MTRNR2L2
MSH3
DHFR
TRMT44
ACOX3
PRKRIP1
RPS6KB2
GPAM
OXNAD1
DPH3
RLF
TMEM39A
SSNA1
ANAPC2
NOC4L
DDX51
TFPT
PRPF31
GTF2H3
EIF2B1
MRPL55
TSN
PFAS
CTC1
MRPL4
MTRNR2L9
FAM149B1
ECD
UNC45B
ATRIP
TRIM48
ADPGK
TBRG4
NUP153
RMDN3
SLC35E1
IPO11
CWF19L1
CCDC86
NFX1
POLR3F
DZANK1
PWP1
SRRD
HPS4
SSU72
C1D
MRM3
GLOD4
C7orf50
POMZP3
SPTLC1
CMTR1
PINX1
RAD18
NUP214
FBXW7
RPL6
PTPN11
DUX4
MRPL2
KLC4
MAGOHB
ADAR
MAPKAPK5
CLPTM1L
SUPV3L1
LANCL2
CHMP1B
ZNF34
RPL8
NOP9
DHRS1
RRM1
AASDH
KPTN
ERMARD
TRUB1
WDR4
FDXR
MAGOH
MAMDC2
PPIL4
RNF139
DUS2
DDX28
RNF166
CTU2
DNAJB12
THUMPD1
ORMDL3
SPHK2
RPL18
FAM83E
SNRPC
RNPS1
ZNF721
PIGG
MIA3
NDC80
METTL4
PELP1
HAUS5
NPHP1
SERF2
CENPW
ZFAND2A
NCBP2AS2
NCBP2
ACAD9
SF3B5
WDR74
FRG2C
ZC3H3
NAF1
C16orf91
CTDP1
FANCD2
ATXN1L
OAZ3
PURB
CCNA2
NUP155
CYP46A1
PLAA
IFT74
POLR1F
SLC25A16
RPS8
BDP1
MED9
AP2B1
RRP1
PPP1R3E
BCL2L2-PABPN1
BCL2L2
UBR4
THAP4
ATG4B
COPS8
ZFPL1
TMEM262
CDCA5
TMEM237
VPS37A
CNOT7
SRPRA
C1orf198
PUM3
WDR53
FBXO45
UBQLN1
XAB2
PCP2
C2orf49
RANBP6
SAP30BP
RECQL5
SRSF11
LRRC40
SETD3
CCNK
FAM187A
EFTUD2
CCDC103
DNAJC30
BUD23
FAM122A
THOC1
EXOSC9
SECISBP2
QTRT2
CCDC191
PEX10
METTL25
CCDC59
IDH3B
CCDC124
PHF7
BAP1
GTPBP10
RABL3
GTF2E1
RPLP2
PIDD1
RRP1B
HSF2BP
SNX16
NDUFA10
GHITM
MTHFSD
SPACA9
AK8
MUC3A
STX18
CFAP410
BRMS1
B4GAT1
RECQL4
LRRC14
RPL23
GAN
COMMD1
CCT4
RPL9
LIAS
KIAA1109
TUBGCP6
AOPEP
MAP3K7
CHPF2
ABCF2-H2BE1
ABCF2
RNH1
TRMT5
SLC38A6
DHDDS
NOLC1
PGBD4
EMC7
AP5S1
CENPBD1
RPUSD2
CCDC32
BOD1
NRAS
PAK1IP1
C6orf52
CACTIN
PSMB2
N4BP1
MFN2
EFCAB2
EDF1
FRG2
WFDC3
DNTTIP1
RANBP2
SDE2
MED20
BYSL
UBAP2
C8orf33
ZNF614
TMEM183A
MED6
WDR61
BRCA1
NUP133
PROSER1
NHLRC3
AP1G1
ZNHIT2
MRPL49
FAU
TAF11
ANKS1A
MFSD14C
CDK11B
CDK11A
TBCK
AIMP1
CBWD5
CBWD3
CBWD6
NUFIP1
GPALPP1
PEF1
NAT10
NDUFV1
PRMT3
U2AF1L5
U2AF1
PPP2R3B
CDADC1
NELFA
MORF4L1
SMPD4
MZT2B
ANAPC10
ABCE1
NOL10
MIB2
MED27
HBS1L
TTLL5
ERG28
PIGU
PISD
RPIA
LDAH
ZNF805
TPP2
TTC1
PSME3
ZNF26
TMEM147
BET1
SENP5
VPS4B
ARHGEF7
SKIV2L
NELFE
SPRYD4
VCPKMT
MMUT
CENPQ
NUP42
WDHD1
SOCS4
ATP9B
CXorf56
TIMM13
RNF141
USP14
IFT172
COQ7
ATG16L1
ANKRD17
ZNRD2
FAM89B
WASHC5
NSMCE2
DDX49
COPE
WDR75
TMEM71
PHF20L1
BLOC1S5
TBC1D22A
TPRN
TMEM203
NDOR1
MDN1
TUFM
SH2B1
SLC35B1
USP42
POLR2K
FBXO43
KIF15
KIAA1143
ZNF304
MDP1
CHMP4A
APTX
STK19
DXO
CHMP4B
NDUFB6
CCDC113
GPKOW
MUL1
TBCCD1
DNAJB11
RNASEH1
SNAPC5
USP8
XPNPEP3
ST13
HDAC6
ZC3H18
VAMP3
PPWD1
CENPK
SERP1
EIF2A
TPR
ODR4
ATAD3A
FBXW9
GUF1
UBE4A
CNOT1
UTP15
ANKRA2
CCDC200
RFC1
KDM5A
CCDC77
TOMM6
OGDH
MFSD14B
ZGRF1
LARP7
MZT2A
DCAF1
PKN2
USP20
C9orf78
ATG5
FAM156B
FAM156A
EMC4
RTF2
XRN1
NBR1
ZNF79
MTRNR2L10
NGB
COL23A1
EMILIN2
RAB5IF
DMBX1
DHX40
MTRNR2L6
ZNF263
ERCC2
CYP4F11
MRPS17
ANGPTL6
SLC25A53
EIF2S2
SLC35A4
APBB3
TSR2
CYSLTR2
TTI1
RPRD1B
ZNF133
TRIM37
SLC39A14
ATAD3B
TMEM9B
COX18
ZNF576
IRGQ
PHF5A
ACO2
OSBPL8
ASXL1
LRRC57
HAUS2
DDX19A
CRYBB2
ZNF2
RBMXL1
KYAT3
MAP3K13
FDXACB1
C11orf1
RPS2
KLHDC4
CAAP1
NGDN
GDF6
TMEM230
NOL3
GTF3C4
DDX31
C13orf42
GTF3C2
TCF4
ING4
SLC25A3
C1orf109
LRRC24
CALN1
GNAS
DEAF1
PPP4R3A
NCAPH2
LMF2
RFT1
SLITRK3
USP16
DUS4L-BCAP29
DUS4L
COG5
SCFD2
GUK1
GPSM3
COMMD6
METTL1
IQCC
EEF1AKMT3
DCDC2B
RNASET2
FBXL18
RORC
DNTTIP2
C2CD4D
RAPH1
SST
LRP2
FOXK1
FAHD2A
OPRL1
LKAAEAR1
C12orf73
CDH11
TMC3
RPN1
RPL24
PPIG
ABT1
ZNF830
TBP
PSMB1
FAM236B
FAM236A
CCT6B
CBWD1
ZNF268
RHOBTB2
ZFYVE28
ICE1
CABIN1
KLHL12
TRMT10C
SEC13
RBM15B
LONP1
CATSPERD
ZNF181
FOXN1
RPL26
KLHL7
NHP2
GPR89B
CDH9
CCDC66
TAF9
SSBP1
RAD17
AK6
ZDHHC3
TRAP1
NXF1
EXOSC7
ELP5
CTDNEP1
KDELR3
PPAN-P2RY11
PPAN
VGLL1
MID1IP1
ATG7
NR5A1
ITGB1
SPTY2D1
SAMD10
PRPF6
MGAT4A
POLA1
FOXP1
DARS2
CENPL
OTUD6B
ERLIN2
ALS2
NRDC
MMP2
FAF1
EEF1AKNMT
DNAJB7
RNF165
NEK10
SCAF11
MRRF
METTL14
CYB561D1
TBX21
PYM1
DGKA
TFIP11
NIPA2
LYRM7
ZNF367
SMU1
H4C8
ARHGAP24
ZNF23
USP22
UCHL5
SPSB3
RO60
PITPNM1
NUBP2
ZNF653
SMARCAD1
SIKE1
UXT
TTYH1
TRAK2
STRADB
INSL4
ERCC5
ARAP3
PSKH1
AMY2A
ZCRB1
PPHLN1
RBM22
NR3C1
GZF1
C4BPA
PPP1R2B
C16orf87
BTN3A3
CCDC174
SELENOK
SERPINA11
HECW2
GPR89A
ZMYM3
KCNH2
GNE
STK16
RPS28
NDUFA7
GLB1L
TMEM119
LMX1B
CLN5
KRT25
FBLL1
EEPD1
PRC1
FBXW2
TCEAL1
MAP2
IQCJ-SCHIP1
IQCJ
TPT1
SNF8
SERPINB7
LOC105370980
ZNF778
FCF1
ENDOV
AREL1
NPM3
FGF8
CLPB
GAR1
OGFR
IL1RAPL1
ZNF197
NPIPB5
HSPA12A
ZNF460
ELAVL2
CCNT1
LYRM2
LGSN
KCNAB2
TRAF3IP2
CCL3
PRR3
GNL1
MPI
C19orf81
REPS2
ERAP1
ISLR2
RPL31
PSTK
CFAP65
AXL
TSPY1
TMEM100
OR13C9
MOSPD2
CDCA8
CBLL1
CASC3
RUNDC3B
KMT2A
YJU2
HIF3A
BBS12
ICE2
LAMTOR5
WDR36
PRKAG2
PLA2G10
LEMD2
FCGBP
ACSM1
EXOG
SPART
NR1I2
IKBKG
G6PD
FNDC7
TMEM128
LMBR1L
CUL2
MCF2L2
TMEM217
TBC1D22B
PKD1L2
LIMD1
CREB3L3
RTP2
GOLGA1
PHYH
MIS12
DERL2
UBE2G2
RICTOR
GPR85
SLC23A2
CYSTM1
SHANK2
RNMT
FAM210A
DCX
SRFBP1
LIMK2
CUL7
STYXL1
SLITRK4
SLC13A4
MDH2
ZZEF1
SLC16A9
PACRGL
KCNN4
CYB5D2
SERPINA5
RAI1
PHF1
LPAR2
EPRS1
GOLGA6L22
SOX30
RHOC
QPCT
PHACTR3
ZNF195
LDHA
ARMC3
ZCCHC9
VEGFC
SPRR4
PCGF1
LBX2
GCM2
FILIP1L
DNASE2B
DDAH1
CCN1
AUTS2
TAFA1
RCE1
DCUN1D1
TWF1
OASL
SAMD4B
PAXBP1
GMFG
DACT3
MAGEA2B
MAGEA2
EPHX2
CSAG3
CBLN2
TMEM132B
LMBR1
CEP295NL
PTPRM
ILF2
DEXI
CLEC16A
SAMD14
RARB
GPRC5D
USP17L3
SYT15
NR1I3
MINDY4
MBIP
LOC102724488
GPR87
CCDC134
SYCP2L
RBFOX2
MSC
LRIG1
CHRNA9
THUMPD2
MRGPRG
IHO1
FGF13
ENOX2
DPPA5
CD38
BECN2
BCL7A
ARMCX1
ARHGAP6
ANO3
AGAP3
ST3GAL3
PRDM6
OVGP1
USP17L7
USP17L2
TARBP2
NPNT
MAP3K12
LCN2
CD79A
CCDC28B
CACNG7
ARHGEF1
TMEM201
SDHC
MYO1H
MPZ
KLHL22
GMPPB
CXCL11
CALCR
AMIGO3
TRPC5
SEPTIN6
RTL4
RPL7L1
GHR
CLRN1
MEIS1
TSFM
TRPA1
TMEM275
PDZK1IP1
GABRE
CCDC60
CACNG3
UBA52
TYR
NHLH2
DDX42
CYP27B1
CCDC47
ZNF180
RPS6
MTHFR
LYPD4
HPS5
GTF2H1
ERBB2
CLCN6
TSNAX
SLC8A1
OR2T1
CSF1R
CEACAM4
C14orf93
SMAP2
PREX2
NPIPB6
CASQ2
ANP32C
NTF3
ZCCHC7
TINAGL1
SULF1
RABGAP1L
PHB2
PAX3
NPIPB4
SERPIND1
DNAJB6
ZNF432
TIGAR
PARVB
TEKT2
SLC16A14
ADPRS
USP29
SLC11A1
FOXI3
SYCE1
NOMO2
IFNGR2
AP3B2
XPNPEP2
SLC35B3
SLC25A15
ROBO3
RBMY1D
RBMY1B
RBMY1A1
PIR
PDE4B
PABPC5
NOL4
KCNH7
GIMAP2
GAS2L3
GABRA3
FHIT
ELF4
CENPVL2
CENPVL1
CDH20
CCL3L3
CCL3L1
BMX
ZNF560
TYRP1
SENP2
SCGB2B2
POU4F1
POLR1H
C3orf49
ZNF3
SLC9A3R2
CEBPD
ZNF165
XPO4
LOC102723623
KIAA0319
GOLGA6L1
FAM180B
ESR2
SULT1C2
PPA2
OR6B2
KRT9
CAMK2N1
ARHGEF35
EDC3
ZNF709
ZNF232
ZC3H7B
USP6
RANGAP1
GRAMD1B
CRBN
LRRC71
HIP1
BCL6
SRSF6
QRFPR
ERCC1
CFAP99
ANKLE1
WHRN
TSPAN18
PIGQ
NHLRC4
GPSM1
ACOT9
SLC2A12
PPARGC1A
PI15
MKKS
ANKHD1-EIF4EBP3
ANKHD1
CCDC130
SLITRK5
PXN
BOC
NRN1
MIPOL1
KRT36
IL2RB
ENTPD3
CACNG2
APOBEC1
TMEM120A
SLC27A1
STON2
ZNF845
ELP1
ABITRAM
VN1R3
TEX13B
TBC1D4
SPATA16
SLC7A3
RNF8
RBPJ
OR51L1
OR1N2
OR14I1
NELL2
MGAM2
MALSU1
LRP1B
LOC645188
LDB2
LCLAT1