ChIP-Atlas: Target genes

Potential target genes for SMAD3

Query protein: SMAD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4096734 | PC-3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD3's Target genes

◢ SMAD3: Average

◢ SRX366175: A549

◢ SRX1012146: BJ

◢ SRX7719077: H69

◢ SRX7719078: H69

◢ SRX7719080: H69

◢ SRX7719081: H69

◢ SRX4161716: HCASMC

◢ SRX064491: hESC derived mesendodermal cells

◢ SRX130088: hESC derived mesendodermal cells

◢ SRX130089: hESC derived mesendodermal cells

◢ SRX130090: hESC derived mesendodermal cells

◢ SRX1445365: hESC H1

◢ SRX1445367: hESC H1

◢ SRX1445369: hESC H1

◢ SRX1445371: hESC H1

◢ SRX064482: hESC H9

◢ SRX148895: LX2

◢ SRX148896: LX2

◢ SRX2425860: MDA-MB-231

◢ SRX2425862: MDA-MB-231

◢ SRX366167: NCI-H441

◢ SRX366168: NCI-H441

◢ SRX4096730: PC-3

◢ SRX4096733: PC-3

◣ SRX4096734: PC-3

◢ SRX5757564: SUM 159PT

◢ SRX5757566: SUM 159PT

◢ SRX5757568: WHIM12

◢ SRX5757570: WHIM12

◢ SMAD3: STRING

WDR74
IBA57
PAXBP1
ACTN1
SPATC1L
TRIB1
RBM25
KCNMA1
LOC100509620
CALM1
P4HA1
TBL1X
SLC43A3
PERM1
SRSF7
SLC7A5
JPT1
CSRNP2
FAM53C
CDC25C
DNAJC25-GNG10
DNAJC25
ZBTB4
SLC35G6
POLR2A
SLC9A1
TMEM107
MYLIP
MKNK2
POLDIP3
FSCN1
BAIAP2
C12orf65
FAM43A
NXF1
SDC4
HSPA1B
UBE2S
PFKFB3
NOTCH2NLC
VAMP1
PRDX1
TTI2
RNF19B
POLR3D
PITRM1
KDM4A
UNK
INTS5
VASN
FUS
TRIM25
NAGK
MICALL2
PLEC
SERPINE1
DGAT1
FBF1
PABPC1
TOB1
NOTCH2NLB
NOTCH2NLA
STK17A
SOCS1
BTG1
POR
PLK2
H4C12
DNAJB1
EIF4A3
AFF1
SIRT4
NCEH1
USP42
SRSF3
NFKBIZ
ANO10
HNRNPH1
GADD45B
ZDHHC4
MTRNR2L2
MSH3
DHFR
ARL15
LDHA
H3-3B
ABHD5
H4C14
SPTAN1
PTPN6
C12orf57
H4C11
MTHFD2
TRA2B
TFRC
SRSF6
PSAP
NOTCH2
IER3
C5orf24
SDCBP
EXT1
TBC1D22A
LRCH4
FBXO24
HEXB
ADCK5
SOCS3
CYCS
FLOT1
POLR2J3
PRRG2
NOSIP
TGOLN2
MARCHF6
LUC7L
ZBTB45
HNRNPAB
TTPAL
POLG
SGF29
KIF5B
TPCN1
NEU1
PIK3R3
IER5
DYNLL2
BLOC1S2
DENR
SESN2
EIF4G2
PNP
NARF
IFRD1
H4C15
TUFT1
DESI2
RINT1
TAF4
UBE2D1
ORC5
C1QTNF6
H4C3
H1-6
R3HDM4
ID1
RARS1
SLC1A5
ERRFI1
RELT
SYPL1
H2AX
PABPC4
SKP1
SQSTM1
BSG
NANS
RPL3
ATF3
GNAI2
ZC3H12A
TATDN1
NDUFB9
FDXR
HNRNPA2B1
CBX3
MED11
DDX5
CEP95
ZFAND5
ZNFX1
TAGLN2
TRIM28
SPPL2A
SLC16A3
SLC35G1
APTX
HBEGF
DNAJB4
ZNF286A
NTMT1
DNM1L
KANSL2
MAT2A
RBM34
PHACTR4
MLXIP
SLC38A2
CITED2
HSP90AB1
PDLIM7
NUDCD1
PTDSS1
MTERF3
FTL
BRMS1L
MGAT1
DNAJA1
HEXIM1
ARL6IP1
TUBA1C
ZNF248
PLAG1
CHCHD7
SPRING1
RNFT2
HEATR5A
RNF14
CNNM4
ALG6
OAT
PHLDA2
KLHL12
IMPA1
UAP1
SMURF2
DRG1
ARL4D
STRAP
NRL
PPIF
SRSF2
MFSD11
RPS9
CDKN1A
TNFAIP8
BBC3
TRAF4
ZBED8
RPL5
SLC3A2
NBN
TMEM199
POLDIP2
SENP5
ERCC1
METRNL
ZCWPW1
MEPCE
USP45
NET1
NDRG1
DYNC1H1
NBPF1
TNPO1
SIL1
FARSA
CALR
ASCC1
ANAPC16
RND1
PCK2
LRPAP1
ID2
CSNK1G3
PPP1R3C
SLC30A5
RPLP0
INTS13
FGFR1OP2
BAMBI
STK38
TERF1
LOC100287896
LIPT2
AMACR
C2orf42
TNFRSF10D
S100A13
TUBB2A
PMEPA1
STIP1
SPIDR
NASP
SMIM12
B2M
MRPS25
GTF2B
CSKMT
C11orf98
PPP1R12C
XKR9
LACTB2
IER5L
RHOB
PTPRA
PTPN2
SERINC5
SRP68
NRBF2
FAM133B
CEBPB
MIGA2
HIF1AN
IRF1
HLA-E
WIPI2
INTS6
PARK7
GRB2
CCS
CCDC87
SRA1
PUS7
RNF135
FAM83D
OAZ1
GOLPH3
SUPT4H1
FAM149B1
ECD
CYP20A1
RELL2
IMPDH2
XPO5
POLH
DNAJB2
NCOA5
EEF2
SGK1
EFR3A
ZNF143
YWHAG
TMSB10
ZFAND2A
RAB11A
CRISPLD2
GPR89B
PRMT9
MYH9
TSTD3
RNF34
RPAP2
GLMN
TECR
DNAJC9
RPL12
LRSAM1
THBS1
CCN2
CAVIN1
KAT6A
DGKH
DYNLL1
RMDN1
EHD1
PPFIA1
DBNL
GPR89A
SLC26A2
KDM4B
PRPF4
FAM126A
CDC26
IQCD
E4F1
RBMX
RIOX1
UGP2
SWI5
GOLGA2
PARP2
LRIG2
TBC1D31
RIPK2
AHR
NFKBIA
MED17
NCOA3
CTNNB1
HDAC3
ZBTB37
SERTAD1
PTPN1
WASHC4
STAT1
BTBD10
FER
ADRB2
PPP1R15A
UBA2
FBXW11
TNFAIP2
TEKT2
ADPRS
TAF13
TMX1
SLC2A3
RBM6
TMEM79
SMG5
KISS1R
GLS
DUSP1
ZNF148
STX10
IER2
EEF1A1
C19orf48
FOS
RBM14-RBM4
RBM14
DENND6A
DPY19L4
SELENOT
PIEZO1
GOSR2
BZW2
ANKMY2
RASA1
DNTTIP2
ALDOA
MAPK8
TUBB4B
TEP1
C15orf39
ZMAT3
YLPM1
SLC8B1
TAF12
SCFD1
ATP5F1B
TMEM151B
NFKBIE
CPEB4
RPS3
LIMA1
NUDT15
TRIP11
TM9SF3
ACER3
PSMD14
SRSF5
FLNA
RGS3
KCTD7
ACAP2
HSPA5
ICE1
CIRBP
ALAS1
MFAP3
FAM114A2
CCDC80
ADSL
PMAIP1
GALR2
TMEM170A
ATP6V0C
THOC3
TMEM249
SLC52A2
FBXW2
FBXL6
NPM1
COTL1
SLC20A1
AFG3L2
SEPHS2
IPP
JUNB
DPY30
CCNL1
RPL13A
RETSAT
ELMOD3
DIMT1
NUFIP2
FAM220A
S100A1
SPECC1L
TPI1
HMBS
HMGCS1
EI24
CUL7
SAT1
VCL
MATR3
ZCCHC24
GTF2A1
SMN2
SMN1
MRGBP
EIF3A
GTF2H2
AMOTL2
FAM234A
NIPBL
DELE1
MTRNR2L1
CALM2
TECPR2
CINP
ZNF326
CZIB
RIDA
POP1
HRH1
SLC35C2
AKAP1
CRLS1
RUNX1
MTMR2
CCNG1
GTF2H5
DSCC1
EIF4A2
BCAR1
NCL
DNMT1
ABTB2
RAB2A
BORCS5
TKT
GSTP1
FGFR1
PDZD8
MGRN1
HERPUD1
CLIC4
ZNF622
WDR47
C7orf26
SLFN5
ASH1L
TUBA1B
GBA
TMEM138
MSANTD2
CYB561A3
ING1
SLC16A1
KLHL7
ABTB1
TRA2A
AKIRIN1
TNIP2
HSP90AA1
LRRC37A3
CNBP
RNF141
SLTM
TAX1BP3
EMC6
POLR2D
PRPF39
MTRES1
KATNBL1
SAR1A
GSTK1
JUN
LZTR1
TNRC6B
ERN1
SLX1B
SLX1A
BOLA2B
BOLA2
PSMD8
SIKE1
TMBIM6
ATG16L1
KPNA1
STK38L
SNF8
NSF
MCL1
EPHA2
ASPSCR1
RSAD1
ATOX1
PCTP
ARPC1A
RABIF
C6orf89
BICD2
PGAP2
MKRN2OS
XRN2
MT1X
MAEA
KRBA2
MTF2
C6orf62
RBM12
CPNE1
SART3
ISCU
SSNA1
ANAPC2
NOL11
MAP3K3
KCNG1
RAB6A
ZNF800
LRCH3
MAPK1IP1L
SDHAF3
PLK3
GLUL
ENTPD5
BBOF1
TOB2
PRKRA
PJVK
LIN7C
TMEM39A
DCXR
DENND10
LATS1
RND3
GNAI3
APPBP2
TMED9
FAM13B
ACSL3
TSPAN10
KIF18B
TFAM
ZDHHC16
EXOSC1
EPHX1
RPL6
KLHL21
ATP6V1B2
TAF15
AARS2
KCTD13
PA2G4
BCAP29
CSRNP1
HES6
COPG1
ATP5F1E
DDX3X
MACROH2A1
WDR11
MRPL35
IMMT
AGO1
THADA
MKRN2
CCDC61
ODC1
RFESD
DPH5
ZFAND1
SMOX
AHCYL1
SAV1
RBBP5
TSPAN17
OTULIN
EIF2AK1
HERC3
ZKSCAN2
CEP85
GFUS
PDIA3
FEM1C
POLR3G
MBLAC2
ZNF546
NPLOC4
RGS2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
OGDH
C16orf72
TACC1
RAB22A
ZNF468
ZNF33B
SNAI1
POMZP3
SMAD7
RUFY1
TMEM71
PHF20L1
POLE4
ZSWIM1
PTMA
PRR13
MOCS2
C2orf69
TK1
AFMID
BOLA2-SMG1P6
ANXA2
BTBD1
C12orf29
SETD9
RSPH3
EFNB2
NEK1
YKT6
OPN3
CHML
TBCCD1
DNAJB11
MAP2K2
DDIT3
MBD6
GK5
TMEM242
ASCC2
HARS2
HARS1
RPL22L1
GOLGB1
LRRC46
NUP133
RPS20
MIB2
CYTH2
GATD1
C1orf74
POLR2C
WDR70
NEK4
CBFA2T2
SLC38A10
PTPN11
RPS6KA4
SMARCB1
RRN3
AMZ2
DNAL1
NOP56
BNIP3
GNL2
PYROXD2
SFT2D3
NFE2L1
EIF5
STXBP3
SCRIB
YAE1
RDH11
VEGFA
NABP1
GNAS
UBC
RPS27
RAB13
PNPLA2
CCZ1B
HNRNPLL
STK11IP
NLRX1
MTFMT
SMIM4
NT5DC2
GTF2H2C
GTF2H2C_2
MLF2
CYB5R4
SLC25A3
TBCE
RPS12
RPP21
CDC37L1
DMWD
BRD2
ESYT2
DDX56
KNTC1
TKFC
DDB1
ADSS2
ARHGAP39
TBC1D7-LOC100130357
TBC1D7
SLC15A4
APMAP
PALLD
PSMD9
HPD
OGFRL1
TMEM68
TGS1
LMTK2
CCDC124
ATP5MF-PTCD1
ATP5MF
SIRT1
SAMD8
DUSP13
TEX30
PACSIN2
MCCC2
PRDX3
FLNB
TRAK2
STRADB
SERTAD2
TPM3
ATRIP
OSMR
MAD2L1BP
PEDS1-UBE2V1
PEDS1
MDP1
CHMP4A
VIM
SNX18
TRAP1
RAB5IF
ICMT
WDR45B
HSDL2
RABGAP1
RTN3
PRPSAP1
CTSB
EIF4A1
RPLP1
CBWD5
MAK16
TAF9
RAD17
AK6
ARRDC3
BTG2
ZC3H10
RPL41
PAG1
ATRN
ZFYVE1
GAPDH
MAPK8IP3
USP48
NUP188
DOLK
ZNF131
MRPS16
UBAP2
EMP1
PDCD6
AGK
PON2
MTCH1
SETD5
MTCH2
URGCP
UBE2D4
TUBD1
RPS6KB1
RBM12B
C5orf51
OSBPL8
FTH1
GTF3C6
PAQR3
TPD52L2
ABHD16B
GGCX
ATXN7L2
BMPR2
PRMT2
B4GALT7
STT3B
POGLUT1
METTL2A
UQCC2
SCAMP2
TMOD3
ZBTB9
PPID
EIF2B3
RNF114
CCND3
VPS37B
ARF4
PYURF
PIGY
ZCCHC9
ZC3HAV1
PTPDC1
LUC7L3
NCBP3
SPTY2D1
METAP2
BBS7
DUSP5
PCNA
ZFAND2B
ZNF627
RNF19A
PSME3
CFAP20DC
SNRNP70
DNLZ
SRRM1
SLC25A16
ATG16L2
RGL2
HIF1A
RB1CC1
ACTB
CLASRP
STAU1
P3H1
TUBB3
MC1R
CD55
RASSF4
RBM28
ZNF696
AZIN1
PARN
BFAR
SELENOW
CABYR
ARFGAP1
DR1
ACYP2
CLTA
ABCF1
SYAP1
YWHAQ
MCTP1
TNFSF9
OLA1
EZR
TAF8
RBM39
ZNF250
TCTA
RHOA
RAB23
USP20
C9orf78
STAM2
NDST2
PMS2
AIMP2
IKZF5
ACADSB
ZNF721
PIGG
TMEM14B
PSME4
CBY3
RALBP1
UBE2V2
P4HB
INTS2
ZNF414
MICU2
CST3
VDAC3
HPS5
GTF2H1
VPS26A
UBTD2
NHEJ1
FZD7
CEMIP2
TRAF6
RAG1
XPA
GADD45A
SOD2
TTC1
SLC26A8
MAPK14
STARD7
KDELR2
PRKAG1
MSRB2
IQCE
SPAG9
RBM45
PDE11A
CCZ1
AHCY
CHMP4B
CDKN3
PKM
SOD1
TNNC1
NISCH
NUP85
TMEM209
TIGD2
SSMEM1
SLC9A3R1
PPP1R12A
THG1L
USP28
PLEKHM1
TARS1
PDCD6IP
NDUFB2
CDC42SE2
GLCE
FSTL3