ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX366173 | NCI-H441
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◣ SRX366173: NCI-H441

◢ SMAD4: STRING

SERPINE1
KDM6B
PMEPA1
COL7A1
GIP
DNAJB5
CST6
BIRC7
ERCC1
CGB8
SMAD7
MYL10
CLTB
B3GNT6
CXCR5
LAMB3
PLEK2
VPS28
TMEM95
KCTD11
RHOD
INPP4B
KCNJ18
ITGA2
ASB2
RNF223
SHISAL1
ARHGEF18
DVL1
PIK3CD
TNIP1
UPK3BL2
LAMC2
MYOM3
SMIM35
OSM
S100A2
CGB5
CGB1
CLDN14
KCNK9
GLIS3
DHRS3
BLOC1S2
AMHR2
LOC100509620
MAMDC2
SFT2D3
UPK3BL1
PALD1
AQP3
MRGBP
MYBPH
PPP1R13L
POLR1G
CLCF1
GJB4
MAP2K3
TRIB1
LAPTM5
GOLGA6C
ID1
TTLL2
PLEC
PITPNM3
GOLGA6A
MTMR11
GOLGA6D
TCF7
TNFRSF12A
CLDN6
THOC6
HCFC1R1
NDUFS8
STX1A
PLEKHA7
KCNK3
SLC25A45
FRMD8
TTLL8
KPNA7
TAGLN2
ZFAND2A
FLNC
B4GALT2
ATP6V0B
F13A1
RIMBP3C
RIMBP3B
C5orf46
HS3ST2
PIEZO1
FHL2
MARCHF10
DENR
RRAD
MTRNR2L8
INAVA
NIBAN2
MAPK13
ANAPC11
ALYREF
ABR
PTPRE
LOC100130520
CD300H
ITGA5
LAMA5
ANXA8
TRIM55
OLFM2
ITGAE
RND1
IVL
CRCP
COL16A1
NAPRT
MROH6
ABCC3
FZR1
KANK4
GOLGA6B
IL17B
NRCAM
BCAR1
MLXIP
H2AW
EXT1
LBH
TFF1
LOC102724265
RHOF
CSF1R
BMP8B
CDKN1A
RUNX1
CD151
EIF4E
CTNNA1
FPR3
YOD1
S100P
QPCT
PFKFB2
SPRR1B
ACTBL2
LTBP3
EPB41
C11orf86
APOBEC3A_B
APOBEC3A
ZC3H12A
GRAMD4
ZSWIM1
SPATA25
BOK
NLRX1
RBPJ
SMAD3
PDE4C
ANKLE2
FERMT1
MSANTD3
CPA4
INPP5A
TTC6
FOXA1
MYEOV
HTR1D
MAP3K9
KCNG2
OPRL1
LKAAEAR1
SHCBP1L
ZBTB7B
SH3BP4
CDC34
NECTIN4
NOL4L
SLC19A2
ADAM19
C1QTNF6
BMP8A
AHNAK2
AGAP1
SMG9
SPINK1
SLC49A3
PALLD
TNFRSF1A
CLSTN1
PDLIM7
PAQR9
CXXC5
OR2AT4
FAP
TM4SF19
TMIE
ATXN1
ALS2CL
STK40
PSMD2
SCT
CDHR5
ADGRG1
MEAK7
LDOC1
CPNE5
NSMCE1
CDHR2
SREBF1
SYT12
FBLN2
PVR
KRT16
ITPRIP
RABL2B
HPCAL1
MMP10
UBL4A
TIMP2
SREK1IP1
SLC10A3
CWC27
VGF
LINGO3
FOXS1
POU4F2
LAMA3
IRF2BP2
CCDC57
FAM131A
CCNI
ALOX5AP
NOS3
GEM
TEX46
BCL9L
KRT17
NDST1
IL13RA1
CCDC88B
CGB3
MET
C19orf33
PITPNM2
RAB26
ATG16L1
HRH1
VASN
RELA
DRAP1
C11orf68
LOC100287896
LIPT2
SLC7A6
CD248
ASB5
ARAP2
SPACA6
SLC39A7
RXRB
RING1
HSD17B8
PSG5
ADSS1
PRDM12
PDE9A
PDE2A
MDK
DMPK
CHRM4
UPP1
CEBPE
CHST11
SFTPB
PCDHGC5
PCDHGC4
MTFP1
PPP1R14B
MDFI
LOC114841035
FKBP2
ANO1
R3HDML
PHC2
IL21R
POU3F2
DLC1
BCAN
RCC1
NR1D1
GPR68
CMIP
ID2
AGXT2
VIM
C1orf105
NPAS4
PLA2G2E
IGSF9B
SPAG9
GSTA4
PIK3IP1
KRT7
GSN
VIP
TTC9
POLD4
IKZF3
PROC
LARP1
KRTAP2-4
HSF5
ECSCR
RABL2A
USP2
MEIOB
ALDH3B1
FAM102A
ENKUR
CACNA1I
ANXA8L1
TRIM29
FSCN1
CLEC2D
CSRNP1
NYAP1
CYP27C1
ATP2A2
ITLN2
GUCA2A
GADD45B
TRAPPC3
NOX4
MFSD12
GNAL
TNFRSF11A
BAIAP2
SRI
KCNQ4
KIAA0930
CCL20
FAM180A
PMF1-BGLAP
PMF1
FAM83A
PAWR
SYNRG
PLEKHG3
GADD45G
RPL24
PPCDC
MELTF
GPR31
GFRA4
VGLL3
PRKAB2
CHD1L
KRT79
CORO6
JPT2
CLDN4
TMEM11
PSCA
SLC4A2
LEP
CDK5
RIN1
ASCC2
MICALCL
KCNMA1
AQP1
UNC45B
GZF1
MYH9
MRPL2
KLC4
THAP4
SLC1A7
KIF5A
FURIN
DCTN2
OR4C3
NPB
MTMR1
MTRNR2L2
MSH3
DHFR
CDH15
GLIS2
EIF1AD
BANF1
TSKU
MTHFR
MEFV
EMP2
CLCN6
PHYHIP
RNF126
LOC388282
ANKRD1
AMZ1
TES
S100A10
SP140
SP110
LPIN1
DUSP1
HMGA1
CHRNA9
ITPKC
COQ8B
SEPTIN9
RAB24
PRELID1
KANK1
TFAP2C
RBM27
ANGPTL4
MUC5AC
SVIL
MUC20
LSP1
APP
WDR54
C2orf81
SMIM29
ROBO4
SLCO5A1
SBF1
CPEB2
ANK1
IGFBP3
TMIGD3
SLC35E2A
OR2A42
MUC4
FAM89B
FAM107B
EHBP1L1
BMF
KRT80
OSBPL7
INPP5B
SCN4A
CD109
ASAP1
AKR1C2
ARHGAP22
INF2
GPR39
RNF213
LFNG
IL6R
HGS
ARL16
TCTEX1D4
BTBD19
STAM2
JMJD1C
XCR1
PRDM11
ENTPD8
CITED2
CDV3
SH3BP5L
PTK2
FSCN3
RALGDS
AXL
TMEM184A
PDZK1IP1
MIDEAS
DYNLT1
IGF1
RAB37
FBRS
FGF1
OR10H5
KRT19
EPS8L2
DEAF1
COPS8
LIMS2
ACOT7
PCYT2
MT1X
GPR17
DLX4
PLAU
MLLT11
CDC42SE1
ZNF354A
ELFN2
PERM1
CD55
PIM1
SERPINA1
LY6K
KRT8
DCST2
DCST1
IVNS1ABP
PRDM10
P2RY2
ZBTB38
TMEM134
LPAR3
KRT78
DAGLA
TMCC1
CFAP65
TF
EMP1
CACNA1B
FOXP1
KDM7A
MAP3K14
EPPK1
ITGA3
HOXA3
WDR74
NPR2
HSPA2
ALDH1A3
AGAP3
ADRA1B
PKP3
RAP2B
VSX1
PSG2
ARAP1
ADAM8
ZNF710
IL15
CDH17
CEACAM18
CROCC2
BHLHE40
ESR2
CD63
TUBB6
METRNL
TPD52
SFN
FABP6
SPSB1
SPATA12
LRP5
FNIP2
RASSF5
NRARP
CCR7
LAD1
FTL
TSPAN12
KLF7
DDI2
TRIM2
SLC35E4
PHLDB1
ADCY7
MIA2
DUSP22
IL4R
OCIAD2
PIGQ
NHLRC4
GLIPR1L1
CAPS2
ZNF622
DUX4
MTRNR2L1
SKIL
FRG2C
LAPTM4B
MUC3A
TBC1D1
SIRT1
LURAP1L
MAN1A2
SNX16
TGIF1
FRG2
TUBG1
RETREG3
IL20
KLHL31
MMP20
F2
TEX45
RNF103
DLX3
LIMS1
SULT1C4
SERPINE2
SLC7A5
TMEM268
VAC14
PITX2
NODAL
LMNA
ZNF148
DIAPH3
GAD1
TRIM48
GSDMD
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
LRRC61
ID3
FSTL3
GAB1
PHLDB2
ANKRD34B
SMYD3
MYO6
TTC39B
MIS18BP1
CASZ1
NDE1
MARF1
RASGRP3
MTIF2
SLC8A1
CMTM6
THEM4
IKZF5
ACADSB
ME3
PRRG2
NOSIP
CCDC200
ROR2
PPP3R1
HCAR3
PPP1R12B
ECHDC3
ICAM2
C15orf39
BCL10
TOGARAM1
KLHL28
YPEL5
BRD7
LEFTY2
INSYN2A
EPB41L1
OTUD7B
HDGF
ABLIM1
AADAT
MTRNR2L9
RICTOR
METTL17
CCPG1
C15orf65
GPR63
H4C5
MYADM
PAX6
TYRP1
FAM172A
CDK5RAP2
ZNF267
TGM4
NFKBIL1
ATP6V1G2
LIMK1
GID4
ATPAF2
FMN1
SEC31A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LEFTY1
KTN1
BCAT1
DACH1
MCTP1
CCDC33
TMEM229B
ANK2
SMARCD3
CENPA
CTCF
ZNF540
PDGFB
PLCXD3
ALDH1B1
UAP1
TMEM263
SCD
PEDS1-UBE2V1
PEDS1
PIWIL4
GNB2
DSP
SSBP3
PELO
ITGA1
SNX25
FDXACB1
C11orf1
AMPD1
CAV1
TLR1
PLCXD2
EPS15
PLAGL1
DDAH1
CCN1
STMN3
KDSR
NPM3
FGF8
KCNN3
ASIC1
SPATS2L
XRN2
ZNF341
EP400
BMPR2
SNX18
FLRT2
KAT5
NEURL1B
FGF17
ZNF571
RARA
MS4A10
RILP
DERL3
MOXD1
PLS1
AGO1
ALDH18A1
MTHFD1L
TNRC6B
STOX2
TECR
DNAJB1
TRIOBP
MACO1
WBP1L
ACOX3
LRRC2
TMTC4
HOPX
RRM1
NUP153
NPFFR2
CEP55
EPSTI1
E2F3
FDFT1
CLIP3
SARAF
TMCO2
TMPRSS11D
SLC25A25
NAIF1
SLC2A2
BRAP
ACAD10
LTBP1
HOATZ
BTG4
ARSI
PSD3
FST
CABP7
UBR5
NFIC
SERTAD4
PLK3
WDR36
H2BC11
H2AC11
SIAH1
BET1
HAUS7
WARS2
CHST3
KLHL5
BACE1
KLF10
DGAT2
DENND2B
DCAF10
OSGIN2
ELAPOR2
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
CCDC88A
ZFR
UTP18
MBTD1
SLC39A13
AHCYL1
SLAIN1
AGFG2
MTNR1A
GATAD1
SRSF10
ZNF592
FAM118A
CTNNB1
USP30
TFPI
CPNE2
PSKH1
RFTN1
MBD1
H2BC21
H2AC21
H2AC20
VWA5B2
ZNRF3
MDN1
DECR1
ZNF609
P3H2
MYOZ2
C1QTNF7
NUMB
GRSF1
NTMT1
SERPINB8
GAS2L1
SLC6A15
LUC7L2
LIMK2
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
APC
SLC1A1
DNAJB4
RGPD8
RGPD5
KMT2A
CSF2RB
PANK2
OAZ1
KLRD1
MFNG
METTL11B
SPON2
SERINC2
MACIR
CNOT1
BRIX1
MINDY3
TBXAS1
SP4
C1orf100
POU2F3
SLC9A1
CDKN2AIP
B4GALT6
NOS1AP
SOWAHC
SEPTIN10
KAT6A
CPT2
ABTB2
H2AZ1
DNAJB14
ZNF792
EPG5
CTPS1
ARHGDIA
POU5F1
PGK1
KIFAP3
PTPRB
PHF19
STK10
OBSCN
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CDKL3
PRDM1
CDCA4
ARMC7
CFLAR
SLC1A4
LENG8
PPP6R1
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
TBC1D7-LOC100130357
TBC1D7
SLC36A2
ASB8
ARHGAP24
GPR183
WWC2
LOX
AGPS
UHRF1
AMPD3
AKIRIN2
ZBED2
PPP1CB
FCHSD2
VOPP1
SLC46A3
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
NOTCH3
CXADR
MAP3K2
FOXJ3
ACSS3
RAB17
JCAD
ZNF460
LPCAT3
ZNF655
VDAC2
LRTM1
ZNF720
KCNF1
GPR37L1
DYRK2
LEMD3
ETFB
CD8A
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
LRP12
HSP90AB1
MSX2
PRRT2
PAGR1
MATN2
SLC2A14
LRP6
FAT4
UQCRB
NOCT
GTF2B
ETAA1
BCL11B
FBXL7
IL6
LRRC37A3
BEST3
POU2F2
CKAP2
SAT1
KLF4
CALD1
NDEL1
MYOM1
H1-2
OVCA2
EPB42
SETD6
ROR1
ZC3H6
TENM3
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
CMYA5
TUSC1
NUP214
IFRD2
UGT1A3
BCL11A