ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360584 | GP5d
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◣ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

ORC2
RGPD2
RGPD1
RAB17
MIA2
GPR35
ATXN7L1
PPIL2
SHISA5
C9orf64
TMEM177
PAOX
LBX2
HNF1A
ACY3
GNAL
MAP3K11
LOC100129484
SLC35A3
KIF21A
ETFA
PAK4
MTRNR2L8
SKIV2L
NELFE
SUCLA2
LAMTOR5
SELENOP
SLCO2B1
DYRK2
RBKS
BABAM2
HMGCS1
PAAF1
COA4
ECE1
CCDC90B
CDC14B
MGST2
VIL1
GRTP1
GPR137
BIRC2
CPPED1
SPATS2L
EPS8L3
IST1
SEL1L3
PRKCSH
CCDC151
MBNL2
CDCA3
PKP4
SDSL
MYL12B
ACY1
MTRNR2L2
TATDN3
NSL1
DUSP18
ANK3
KNL1
GRM4
ZNF827
AQP11
MTRNR2L9
GAB2
SCAF11
NRBF2
GOLPH3
FEM1A
VCPIP1
C8orf44-SGK3
WDFY2
SEPSECS
HEPH
ZNF567
SEC23A
TNFRSF10B
LURAP1L
TECPR1
MMADHC
MYO1A
CACNB2
SCO2
POLRMT
NADK2
GSTK1
OSER1
STK24
DENND2B
CDKN2AIP
SLC7A7
TMBIM1
JMJD1C
WDFY3
ZNF789
ZNF214
NLRP14
ABCC6
TSPAN3
PHACTR4
DENND5B
PEMT
MVP
METTL7B
CYP4F3
ZFYVE27
TREH
DHRS3
MUC13
AHCY
MAIP1
PIWIL1
ZNF764
SH3BGRL2
NPTN
RPL35
ARPC5L
VTA1
NMBR
TM4SF5
C1orf174
ATAT1
SOS1
OCIAD2
HADHB
HADHA
PDE11A
MRPL40
HIRA
ABLIM1
HGD
MAF1
TP53I3
ACOX2
CCDC93
CYB5R3
ZNF219
RIN3
ALAS1
CALM3
AHCYL2
ZC3H12D
MLXIPL
LIF
WASF2
GBF1
ZNF564
LSM14A
DECR2
TARBP2
PERP
TJP3
ZSCAN22
ALDH3A2
BCL9L
EIF6
TANK
C1orf210
SDC1
ALPI
TSPAN14
CDHR5
WDR7
TTC31
CCDC142
SMAGP
ZNF232
C15orf40
NR0B2
ADD3
MRPL11
S100A16
NCOA2
OCIAD1
WDPCP
MDH1
PCYT2
NR1D1
CRYBG1
PTK2B
SLC38A10
TRIM35
PCGF3
PABPN1
PPFIBP2
HIPK2
RPL36AL
MGAT2
MPV17L2
ESRRA
MGAT1
STX18
CMTM6
TNS3
IL18R1
L3HYPDH
JKAMP
NEURL2
CTSA
ZBTB40
PHF12
CSTF1
AURKA
HAAO
NEK2
PDXP
PINK1
PANK1
NR1I3
CCDC107
NDUFS1
EEF1B2
WDR74
DEAF1
NRL
DCAF11
CREB3L3
SLC19A3
AGMAT
SH3D19
IDH1
RAB37
NQO2
SMG5
VAMP5
HNMT
PLEKHG6
IGSF23
PPIP5K2
SRSF11
LRRC40
AJUBA
F10
GAB1
AHSG
CYP17A1
COPS4
PUS10
PEX13
TDP2
ACOT13
MMACHC
TRIM15
FCHO2
APOB
RABGGTB
SDCBP2
RPS3A
XYLB
CBS
PSMA5
SCARB1
ANKS4B
SLC45A4
GDI2
LARP1
TCIRG1
KLC4
TK1
AFMID
NDUFA6
KRTAP5-7
BLOC1S5
IQANK1
FAM83H
ADAP1
FYB2
MAN2C1
IL32
NID1
MCRIP1
GSDMD
IFNGR1
APOA1
HSPE1-MOB4
HSPE1
HSPD1
FASTKD1
MRPL2
ALKBH7
BORCS7
APOC3
GNG4
UBR4
RAD50
PEPD
HRCT1
WNK4
CLASP1
CFB
PRAP1
H4C3
TRIM14
F7
C1GALT1
ATP7B
ALG11
SEPTIN9
OPA3
CMC1
NEU4
DNMT3A
ZNF184
ABCD3
MIA3
C3
INHBE
QPRT
UBA6
CBY3
IQCN
STX16
WDR36
SMYD5
HSD17B11
ANXA9
SEC16B
CSNK1A1
MTIF2
ATXN7
TMCO1
DOK4
BLCAP
SARDH
MST1
RAB32
DIP2C-AS1
BRCA1
MYADM
PEX11G
PLXNB1
MTMR4
MMP15
CD2BP2
TUBG1
RETREG3
AKAP1
SLC28A1
GIPC2
TRAF4
CIDEC
ZNF512B
AMACR
CRK
STARD7
CCR6
SHF
SPATA2
ISOC1
RBIS
DNAJC22
SPPL2A
PRR3
GNL1
TAOK3
TBCCD1
POLDIP3
UBA5
SLC2A14
NUDCD1
CLIC1
INTS9
HMBOX1
RPS7
AGT
MSH5
PCGF5
TMEM140
FNIP1
KIFC3
MOGAT3
LCAT
ANKRD40CL
KMT5A
ASGR2
SOD2
VEGFA
SMLR1
ATXN2
VTN
C11orf24
ARNT
RPL34
TMEM150A
SCP2
PHF14
POLR2H
MPND
DDC
IYD
SEH1L
LAPTM4A
OTULIN
ENTPD8
TACO1
SFRP5
CSRNP1
MOV10L1
USP37
CNOT9
PLXNB2
UGDH
INTS4
GPT
SLC35D1
DRG2
CPHXL
MAP4K5
ATL1
SLC39A5
GDF15
GALM
PPP1R12B
PGLYRP2
PGPEP1
MRPL20
ST3GAL6
CDIP1
NIPSNAP1
GALK1
KRT8
TOGARAM1
KLHL28
GPHA2
GAMT
ZSWIM3
ACOT8
EHHADH
CAMSAP3
CHST13
C4BPB
TUBG2
CLDN4
GRB7
CRYGC
SH3D21
KPNA7
PRXL2A
SOAT2
ZNF444
PJA2
COMT
FUT5
ZNF747
CD86
CCDC146
NRSN2
CMPK1
TJAP1
UMPS
SMARCD2
RFPL2
STARD4
TMEM181
U2SURP
ATP5MC3
PIKFYVE
DDX19B
RCL1
ZNF696
SOCS5
LIN54
PKLR
WFDC3
DNTTIP1
ACSL5
RNPEP
CREBRF
GUCA2A
PGAP3
ERBB2
SELENOI
C2
ADGRF3
ROCK2
TMEM139
TMEM254
NGEF
POLR3A
RAP1GAP
METTL8
DCAF17
TCAF1
TMEM256
TECR
DNAJB1
NUFIP1
GPALPP1
PDLIM2
MAF
C11orf49
CEP43
ZNF57
LSM2
CDK5RAP1
ARPIN-AP3S2
ARPIN
PRDM10
MFN2
GFM1
THNSL1
C11orf86
SLC41A2
SCNM1
LYSMD1
MLF2
HPS5
GTF2H1
UBE2R2
PCGF2
PRR5
TINAGL1
CLRN3
ZBTB8OS
RBBP4
RBP5
CCDC71
GLTPD2
MARK2
HINT2
RCAN1
BRIP1
CRNKL1
CFAP61
NUP107
F2
TPT1
RSPH14
ASB9
FTCDNL1
CYCS
RPS15
PALM3
RNF149
KCNAB2
NOSTRIN
FUT10
GFER
PPP1R3D
FAM217B
MYH7
CES1
BTBD19
ACAP3
SLC10A5
TBP
PSMB1
SNRPF
ZFAND2B
AMN
TMEM71
PHF20L1
STAT5B
SDHAF1
APOM
SLC22A3
VPS28
MLLT10
LEAP2
CYP8B1
TMEM202
TRMT2A
RANBP1
CEP152
PYGL
PCK1
RBM33
RDH5
SLC36A1
IL7
PEF1
AK3
SERPINA1
RNF19A
TTI1
RPRD1B
ASAH1
SNRPA
HPR
C2orf88
NGRN
TFR2
CLCF1
SENP1
PFKM
MIEF1
CWC25
SAXO1
RRAGA
RPL27
PALM2AKAP2
ACACB
KIF16B
FABP1
PWP1
ZSWIM8
SLC26A1
LRIG2
RPGRIP1L
FTO
TF
AIG1
PRR13
FBXW5
C8G
ASGR1
PAFAH2
BTNL8
ABCC2
POLR1H
HBP1
BPHL
ZNF343
CALML4
SASH1
C19orf12
ZNF165
RBBP5
BAAT
CHCHD2
LOC110384692
C4B
C4B_2
C4A
RHBDD1
IRS1
AIFM2
APOC2
SURF4
MAP2K3
SLC31A1
HYAL2
FKBP15
ANKRD26
COQ5
TIMMDC1
LGALS2
LINS1
ASB7
ITPK1
ARL5A
B4GALT4
FDX1
ORM2
ETV4
TWF2
NFATC3
F12
POMGNT1
CD99
AXL
UFL1
MTFR2
SLC22A18
HOXA3
FAM185A
DNAJC15
KDM3A
GOLGA4
EPHX2
RWDD3
EIF4EBP3
SSTR1
SSUH2
TPRN
TFDP2
TTI2
AAR2
EFNA1
SLC2A4RG
STN1
SRSF4
ORM1
SORT1
RFFL
CLPB
NR2F2
DOK7
ACSS2
CYP19A1
SLC22A9
EIF1AD
BANF1
ZFR
SLC30A1
RFX7
DCLRE1C
LTV1
DGKD
SLC22A7
CYB5A
ETV5
RAB30
PIPOX
APOBEC1
SYN3
ARMC5
GCHFR
AATK
CFLAR
GSTM4
BAZ1B
KATNB1
NFE2L2
LIME1
PHF7
CYP27A1
BAP1
MNAT1
CHD1
NODAL
VPS54
VANGL1
ERF
ADGRG7
DHRS7B
ALG14
C3orf86
YEATS4
PTS
IGF2BP2
PTPA
CRAT
ASPDH
HP
CXCL17
MRPL24
PDZK1
USP10
RMND1
ARMT1
ACAT2
LRP1
APOA2
TMPRSS4
GPR108
GFI1B
RBMS1
ZNF529
CHMP4B
CCDC68
EMP1
POT1
C11orf91
INVS
ERP44
FZD5
OSBP2
ACOT7
SMIM11B
SMIM11A
PIM3
SERPINF1
SERPINC1
ZNF548
CLDN19
AMT
SLC51B
PYROXD1
BOLA1
MRPS24
EPS15
ABAT
ENGASE
ARHGEF16
SERPIND1
N4BP2L1
COX16
NFXL1
MRPL44
PSMB3
GGCX
CDK11B
CDK11A
ADPRHL1
CX3CL1
MEP1A
FGFR4
ARSB
RREB1
LMO7
PROS1
ZNF384
DAO
EPS8
PKP2
UGGT2
GSTO1
TLDC2
SECTM1
AGPAT1
SMG8
RBM42
ZNF230
POLD4
SULT1A4
SULT1A3
CLNS1A
NOP9
DHRS1
PLA2G12B
PLEKHJ1
C11orf52
SLC16A3
PRPF40A
BANP
TOMM70
LNP1
SUOX
CLUAP1
MRPS30
ZBED4
SLC25A16
IPO4
MSLN
H4C12
RNF31
PSME2
FAM136A
NSUN5
ACO1
WDR90
TSKU
ATP5MF-PTCD1
ATP5MF
ATXN1
UTP14C
BSDC1
STK11IP
SHPK
CTNS
PTBP1
PACSIN2
VARS2
C19orf54
TCEA2
PPP1R37
SH2D5
FAM98B
CNOT2
BDH1
SLC25A45
AASS
DLC1
TIA1
PARP4
MAOB
USP16
MRPS28
ZNF101
MAFG
GMPPA
GPANK1
CRADD
ACOT2
ZBTB4
POLR2A
CRLS1
RNF5
SEMA3B
CMTM8
PROZ
NME1
MTARC1
IL13RA1
SP5
RBP4
FITM2
SNX7
PCYT1A
SLC19A2
MIIP
RPL12
LRSAM1
TMEM19
KYNU
ALDH2
TMEM101
NOTCH2NLC
NPM2
NEDD8-MDP1
NEDD8
GMPR2
MAGI1
TOMM40
RPL41
NAP1L4
MASP2
NR1H3
FBLN1
SUSD2
CSNK2B
CRPPA
NAB1
MT1F
KIAA2013
IL11RA
SNRPB
EPHX1
EHBP1
NUP210
TMEM143
SYNGR4
GMNN
SLC40A1
TYMSOS
TYMS
TMEM115
FOXJ3
LRRC29
CLSPN
SF1
PNPO
IFIT3
RHOBTB2
CNKSR3
ZNF225
TMCO2
IL1RN
IQGAP2
HDHD3
DLX2
GANAB
TSNAXIP1
RANBP10
BPIFB2
NOTCH2NLB
NOTCH2NLA
ECI1
PTGR2
PKIG
MYO7B
HNF4A
AP4S1
TMTC3
HLA-A
GLT8D1
CEP290
RSPRY1
N4BP2
LEKR1
METTL25
CCDC59
IQSEC3
RAB42
AGFG2
ALDH5A1
GCKR
CCR1
RPP40
LTBP3
SYT12
FLVCR2
SENP3
RNF121
LOC100133315
IRF5
PTPRG
NUDT13
NR2F6
LZTS3
CCNI
RMND5A
GDPGP1
CIB1
TNFAIP8L1
G6PC
UHRF1BP1L
H4C8
C1orf115
DUSP15
PEX3
ALDH3B1
ADAT2
MTRNR2L6
ZNF565
ZNF146
TRIP4
RBM39
NIPAL1
CNGA1
SP2
ELK4
STAT3
MTRNR2L10
DONSON
YAP1
SF3B2
EPS8L2
SHTN1
HERC5
AKR1C4
RASA4B
CBWD5
CBWD3
C18orf21
MYO1E
EDEM2