ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359955 | LoVo
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX512370: iPS cells

◢ SRX968908: iPS derived neural cells

◢ SRX968909: iPS derived neural cells

◢ SRX968910: iPS derived neural cells

◢ SRX968911: iPS derived neural cells

◢ SRX968912: iPS derived neural cells

◢ SRX6852811: KNS-62

◢ SRX277131: KYSE-70

◢ ERX2260038: LK-2

◢ ERX2260044: LK-2

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◣ SRX359955: LoVo

◢ SRX2731713: Lung cancer cell line

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX6852809: NCI-H520

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ ERX2260040: Unclassified

◢ ERX2260046: Unclassified

◢ SOX2: STRING

MAMDC2
DNM2
ARRDC4
EIF2AK3
SP1
MTRNR2L8
NDUFS7
RGPD1
RGPD2
PLEKHG2
LRCH4
FBXO24
STIP1
MTRNR2L2
MSH3
DHFR
POLG
EVI5L
ZSWIM4
HNRNPC
CIC
SARNP
ORMDL2
DOLPP1
LTA4H
RFX1
KHSRP
TEPSIN
NDUFAF8
SLC25A42
RAB5B
SP2
BORCS6
GOT1
TOM1L2
DRC3
P4HB
ZNF687
MPV17L2
FRG2
CNOT1
G3BP1
KATNB1
ZNF839
ATP5F1B
ARID4A
HNRNPL
SLX1B
SLX1A
BOLA2B
BOLA2
GATAD2A
ANP32A
TMEM60
PHTF2
PWWP2A
KMT5C
NLK
CAMTA1
FAM72C
FAM72D
GLRX5
TBC1D10B
MYLPF
SCAMP4
ADAT3
ZNF143
FRYL
ATF7-NPFF
ATF7
KCTD7
CREB3L2
MCM5
PRKACA
TPCN1
IQCD
ABHD2
H2AZ2
MRPL34
DDA1
GOLPH3L
HDGFL2
UIMC1
SPAG7
ZBTB32
POLR3E
HMGCS1
ATG9B
ABCB8
ENSA
AGFG2
TIA1
BOLA2-SMG1P6
TOMM40
RECQL
GOLT1B
OS9
LAPTM4A
PODNL1
DCAF15
FAM72A
FAM126A
STAP2
MPND
GLCCI1
SFXN5
RAB11A
CYTH2
ARNTL
KAT6B
DCTN4
PCLAF
RAB11B
CBWD5
CBWD3
KDM4B
SLC2A8
DENR
SLC26A2
RFWD3
EIF4A1
TRIM7
ZBTB5
HMGN4
TRIP10
GPR108
UBE2C
COPZ1
GPR84
H4C8
CDC23
GRK6
STT3A
COX5A
CNOT3
RPS29
MTRNR2L9
TSKS
AP2A1
PPP6R3
PSPN
ALKBH7
CUTC
COX15
OSBP
WDR97
MAF1
ARL17B
ARL17A
FRG2C
PDCL
CCNT1
SMARCC2
WBP1
INO80B
COL23A1
XAB2
PCP2
ILF2
SHF
KNL1
C8orf37
TOM1
LUC7L2
FMC1-LUC7L2
FMC1
MYH9
ATP5MC1
DCT
SLC35E2B
NRARP
MTF2
NAV2
SACS
SMARCA2
NES
PIPOX
CDX2
FAM227A
CBY1
WDR74
METTL11B
DUX4
LFNG
SOX6
HMGB1
SOX2
LRRN1
DNMBP
ZSCAN2
MUC1
REST
NDUFB5
MRPL47
HDAC9
AGO1
OTX2
LMCD1
CACHD1
ARHGEF38
ID3
PTMA
SOCS3
WFDC8
DNMT3B
IFRD1
FGF1
MUC3A
TMPRSS11E
OR5AR1
ARID2
ZFHX3
PPBP
PF4
NRG1
FIGNL2
DUSP6
MTHFD1L
MED25
FUZ
RMND5B
SPATA45
RPH3A
NTRK2
GDF11
DPPA5
BCOR
NOTCH1
SFRP2
ZNF483
ANKRD1
CD99L2
TCF7L1
SLTM
SNRPN
MOBP
ETV1
BTG2
NRCAM
FGD4
USP44
ADAM28
GSN
TRIM48
ZNF608
TALDO1
RIIAD1
PPP1R16B
DDX17
SHCBP1L
ABHD11
EDDM3B
FLAD1
FGD3
ZNF775
HES3
PLPP2
FAM222B
MTRNR2L1
ETV4
ICMT
PHC1
GIMAP5
SAMHD1
GXYLT2
PDPN
RCN1
GADD45G
PRICKLE1
CYP1A1
OBI1
TMCC1
ITPRIP
DHX32
CELF3
SRRM4
SNX16
HESX1
GAD2
GOLGA6D
FGFR2
GPSM3
VCAN
SLC7A5
TMEM47
BFSP1
PARP1
PREX2
FZD2
NFE2L3
SAMD5
LIN28B
SNURF
LZTS1
ZNF398
POSTN
SMCO1
TDGF1
NADK
PALM2AKAP2
FBP1
GPRC5B
TRIM24
LRRTM3
CLDN9
MFSD4B
ECE1
RFX4
FBXW11
FZR1
AMN1
MTM1
PER2
PSMD9
HPD
PGPEP1
PHF5A
ACO2
MRPL20
PLAGL1
FAM120B
ZSWIM3
ACOT8
TIMP4
KMT2B
TBC1D16
CCT2
SCGB3A2
SYT2
SHISA5
CHN2
PMEPA1
DDR1
ESRP1
SORBS2
TRIM2
TNC
NCDN
KIAA0319L
WDR49
ZFC3H1
THAP2
GOLGA6A
DCAF4L1
TRAPPC8
RGS3
LIMCH1
RASGRF2
GJA1
KDM2A
TMEM41B
KCNJ1
PSIP1
SOX14
FBXL19
ST18
HGS
ARL16
SPRY4
MAD2L2
DRAXIN
TTYH1
HBG2
FRAT2
C1orf127
POU5F1
GPC4
IER5L
SOX5
SELPLG
MCCC1
PLEKHG1
FBXO40
IFT80
ZNF343
SASH1
GET3
CDC42EP3
ZSCAN10
DOK7
OSBPL1A
FZD8
MED12
GOLGA6B
IQCH
AAGAB
OR2T1
NDUFS5
CYP2S1
SCAF4
NDST1
HHIP
VWCE
BEND3
RASAL2
FOXP1
DGLUCY
APOBEC3F
KIFBP
FGF2
CTNND2
TES
KCNN2
RASA1
MYCL
ONECUT2
GDF3
TPST2
HMOX1
FAM180A
RBFOX2
CELF4
ARIH1
ZNF335
HOXD13
HOXD12
GOLGA6C
PNRC1
NANOG
MDN1
ETS1
CEP41
TNRC18
ACVR1
SLC35A5
ATG3
UTF1
SH3BP4
CCDC200
DICER1
TRIB2
SLC20A2
PEAK1
HMG20A
ALDH7A1
WNT5B
B3GALT5
BCL9
TOX3
CRYGB
RTN4
LOC100129484
OLFML3
PRR15
LINGO1
CDC14B
PLEKHB1
SPHK1
DAGLB
HES1
ZNF436
MYSM1
TUBB
MDC1
CAPRIN1
SRSF7
SNAPC3
IL34
EXT1
REV3L
SLC39A8
UNC13B
PCBP1
PYGB
LEFTY2
KDM2B
C1orf198
GNAI2
DTNA
ADAR
CCN2
CER1
C8orf58
PGK1
EPHB3
SYN3
DHDDS
SLA2
FOXD1
SGMS2
ADA2
EPB41L1
SRCIN1
TESK2
L1TD1
ZNF304
LYPD6B
PRDM14
NECTIN1
LRAT
MAP6
ECT2
LRTM1
DDX43
MMACHC
KDM3A
ZNF532
ZNF536
ABCB5
GTF2I
CARHSP1
CACNA1S
OCSTAMP
ERMN
LMNA
AASS
MACROH2A1
SLC33A1
TRIML2
VPS37B
WBP1L
VENTX
CAPN3
PGBD5
TIAM1
UNK
H3-3B
KLF3
CSF2RB
DLL1
PCYT1B
CHFR
HES5
ZNF296
PANK4
GEMIN7
TJP2
CXADR
NPSR1
ANKRD6
PUF60
AEBP2
SMIM14
SNX19
BCAT1
CCDC169-SOHLH2
CCDC169
JPT1
OAZ2
DACT3
FAM181A
WDFY2
SLC10A2
NWD1
ZNF195
SRP68
AUH
SALL3
MAGEB2
PAFAH2
LIN28A
SMAD3
ANK2
FXYD5
GLI2
CHD6
MRS2
KRT6B
RAX
SLC46A1
LIPK
CRISPLD1
LRRTM4
PPP2R3A
LHFPL4
DST
LRIG1
ZNF781
IL7R
NXPH2
NDUFV1
TRDMT1
PIN4
USP7
CACNA2D1
TMC5
CTBP2
ALDH1A2
MAST4
NTN5
STOX2
STK31
ITGB3
ZNF565
DPYSL3
FZD9
INO80D
MARCKS
MMP10
PACSIN2
DIDO1
SENP2
TIAM2
TSPAN14
GABRQ
DHRS3
PDE1B
SLCO5A1
NEBL
INSM1
SALL4
EMSY
GABBR1
FAM20A
CCDC33
ACOXL
KLF6
TP53INP1
MSANTD4
TGIF1
ABCC2
MOG
C20orf96
VOPP1
ACSL6
SIK1B
SIK1
RMND1
ARMT1
CDYL
GBX2
TNRC6A
TRPC4AP
OSBPL2
ATP6V1G1
CELSR3
ETFB
ESX1
TAGLN3
ANKRD40
NDUFAB1
H3C15
H3C14
H2AC19
H2AC18
UFD1
SMPDL3B
CDC45
IL21
TMPRSS9
AASDH
NKX2-2
DPH6
GCNT2
TMEM43
CHCHD4
DND1
KRT8
SORT1
ZBTB45
SPATA22
POLB
LONRF3
DPPA4
GABPB2
SLC2A14
ZNF814
SYAP1
ESRRA
CATSPERZ
FAM24B
GLDC
GCSAM
SLC3A2
PCDHB8
PCDHB16
LEKR1
SLFN12
KLF7
DET1
PXMP4
PRSS23
PIK3C2A
TMUB2
PXDC1
SIX2
PTAR1
LRRTM2
CTNNA1
TET3
ISOC2
LLGL1
TRMT2A
RANBP1
RNF19A
FOXO6
ZFYVE1
ACSL1
TP53
AK4
SHC3
RNASE9
GABRB3
ARID5A
ZNF428
CDH10
ACCS
EPB41L2
SLAMF1
SPATC1L
SEC14L5
CCDC130
PCDH1
CHD7
PRRC2B
CCDC88C
FRS2
PDE4B
EPHA4
MID1
ABL2
TSPAN5
TMPRSS7
TLL2
BAHCC1
PREP
WDHD1
SOCS4
PPP1R18
NRM
ITPK1
ARMC12
RNF43
PCDH18
PITPNM2
VEPH1
LRGUK
DUSP12
C10orf95
SLC16A13
ZNF875
CCL2
UPF1
ZBTB2
CCL26
WDR44
IGBP1
C22orf39
SPIRE1
PRKAG2
NUAK1
ETV6
TTYH2
HMGN1
SAXO1
RRAGA
KCNIP4
ZSCAN9
YIPF4
ARSL
KRTAP3-1
RBM20
RAB23
TRPM1
IFIT3
PSME3IP1
EXOSC9
TGIF2-RAB5IF
TGIF2
PDIA4
APOBEC3D
APOBEC3C
VASH2
FAM200B
JAG1
VEZT
SLC25A36
FGD6
PHC2
NRXN1
SUCO
SYNCRIP
RHBDD2
TMEM114
CNGA1
PRND
ELOVL6
PLCH1
ITGB5
HSPH1
ZNF552
NATD1
RIF1
MUS81
CFL1
VANGL2
FGFRL1
CDC42EP4
SPAG9
PRKCA
NACAD
STX16
PIK3R3
GADD45A
LRRC47
GFRA1
ANAPC15
TNFSF8
DEFB114
DEFB113
LEFTY1
MNT
SAPCD2
NEK3
LOC150051
SYBU
ADGRL2
TRIP4
SLC25A11
RNF167
PAN2
IL23A
NUP160
CNN3
PAK1
DLST
TLE3
RTBDN
MAST1
RAPGEF5
FZD5
CD2BP2
MEIS2
PRR5L
NEDD9
IFI16
PDE4D
AHNAK
GSPT2
ZFP3
CYB5R2
BAIAP2
LCOR
TUT1
MVB12A
RARB
SH3GL3
RAB30
SDCCAG8
CEP170
MIDEAS
OR6C3
IGFBPL1
RIMBP2
NEPRO
TCF4
STRA6
COL17A1
HDAC4
F11R
OGA
GSAP
RAB36
FZD7
TFE3
SLC2A10
CRB2
TRIT1
BBC3
PYCR2
TLE1
CDC25A
DTX2
GRHL2
ZMAT2
DNAJB1
TCF12
HLTF
RPL27
PDHA2
YAF2
WDR36
TIAL1
THRB
NIPAL1
RNF186
PES1
ZNF254
AHCYL2
SPATA12
MEF2C
HOXB1
DPP3
ZBTB40
UBAP2
TFDP2
CUBN
AKIRIN2
ZNF358
DHX8
PKNOX2
MEX3D
PTGS1
EGR3
TLX3
HELLS
GPR179
CTTNBP2NL
AKAP9
MOSPD3
PDGFA
ZCCHC3
C1QTNF7
RAB17
MTUS1
KIAA1522
LNX1
PTTG1IP
RESF1
DISP3
NFE2L1
CPA5
ERGIC2
HSBP1L1
FZD3
CFAP20
YLPM1
FGF6
CSRNP2
ANKHD1-EIF4EBP3
ANKHD1
CLCF1
RPL23A
RAB34
IPO11
SLC23A2
MTHFD1
CCDC167
SCOC
TNP2
PRM3
NUDT2
SINHCAF
RNF213
FGF19
PRUNE2
ABAT
IGFBP2
JPT2
ZNF202
ARSG
KLHL5
TCAF1
S100A16
TMEM132B
ADGRA1
TBC1D23
VIM
SKIDA1
CAPZB
SPIC
KIF21A
TCN2
SDHC
MAP2
GAST
CCDC81
TFAP2A
MBNL3
CNMD
RAI14
SMARCAD1
LYPD1
ARHGAP24
KNTC1
RIPOR3
PIF1
PEA15
RGS12
ID1
PYGM
PLEKHA5
LIMK2
ETV5
NCOA7
BAAT
CEP63
ANAPC13
MAP2K5
TCTEX1D4
SENP8
MYO9A
STK32C
LRRC27
ZMAT4
LRP12
NEUROG3
SEPTIN9
HECW1
ARF4
AKIRIN1
SYTL2
FAM153B
CAAP1
NKX1-2
PTPRN
KIAA2012
MEX3A
SEC22B
ASH2L