ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◣ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
PSMD1
NME6
IPO13
ZNF335
S1PR4
NCLN
DYNC1LI2
CACTIN
TAOK3
SUDS3
RWDD1
NUP85
NEUROG2
VDAC2
POLR2E
GPX4
VTI1B
MRPS7
MIF4GD
GGA3
LOC102724770
DGCR6
PSMG2
CEP76
HSPA9
NUP205
TSN
FAM187A
EFTUD2
CCDC103
TBCK
AIMP1
GOSR2
NVL
REXO1
DCTN1
TSNAX
RPL21
STAM2
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
PES1
SEC61B
C19orf48
CAPRIN1
STAM
NNAT
BLCAP
SRD5A1
NSUN2
PNO1
RBBP5
SLC35B1
UPF2
LYRM4
FARS2
FARSB
ACTR10
DUX4
ATP5MG
NEUROG3
PCBP1
NDUFA4
PAK1IP1
C6orf52
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
LBX1
ANAPC7
PI4KB
SART3
ISCU
UFM1
PDAP1
BUD31
TLE6
MRPS5
ICE1
FRG2C
RPL35A
IQCG
LMLN
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
MRPL11
RABGGTB
ADK
AP3M1
RBKS
BABAM2
USP1
ARF1
PROSER1
NHLRC3
SMC2
FAM104A
C17orf80
SFI1
EIF4ENIF1
G6PC2
PIP4P1
OSGEP
APEX1
XPNPEP3
ST13
DNAJB7
RPS12
RPS27A
CLHC1
BICRA
PAF1
MED29
ICMT
HES3
ZNF503
HSPA1B
UBE2I
COMMD1
CCT4
TM9SF1
IPO4
TSSK4
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
NBAS
MRTO4
EMC1
ARHGAP11A-SCG5
ARHGAP11A
ATOH1
LARP7
FZD8
ARID3C
DCTN3
PIN4
ADNP2
C6orf47
BAG6
APOM
RPS29
LRR1
RBBP7
GTF3C4
DDX31
WNT1
NEUROD1
INSM1
NFKBIL1
DDX39B
ATP6V1G2
UNKL
C16orf91
RPN1
ARHGAP10
CD79A
ARHGEF1
FRG2
SUCLG1
CDC73
NEUROG1
ZNF608
CCDC33
OAZ3
EIF2S3
NOTCH2NLC
NOTCH2
ANKLE2
TAF9
RAD17
AK6
GLRA1
ARL4D
PMAIP1
SKIL
NAV3
URM1
TPM1
RHBDD3
EWSR1
ADAM18
CDX2
SEC11C
RPL7
RDH10
PCBD2
NR2F1
PDHX
APIP
GADD45GIP1
CR1L
PPP1R1B
LPIN1
RAB11FIP1
PRUNE2
OR10AC1
ME3
CCDC200
NHS
ZGPAT
ARFRP1
EVX1
EVA1A
UNCX
ZP4
STK36
RNF25
PAH
ASCL1
PRDM12
SERINC5
ALKBH5
IGFBP2
PTGES2
DLX4
ZNF585B
ZNF383
PSMB5
KDM8
RIMKLB
SRSF11
LRRC40
LZTS1
CNPY2
TLE2
ANK2
PDHB
NOXO1
PPP1R1A
SYNGR3
GFER
ETS1
DBX1
DIPK1B
FGF19
SH2B1
AXDND1
PLAGL1
MUC20
RYBP
GORAB
CRYAA
CRYAA2
TMEM70
ELOC
SNAPC1
LRATD2
ECM1
ITGB6
ERRFI1
FAM222A
ECEL1
KIF26A
DDAH1
CCN1
KIF21B
SEC22B
WDR59
LAMA4
TRABD2B
HOXB1
CLDN2
PDE12
MYLK4
EIF4H
TEX46
KDM1A
NELFA
SLC7A5
RBPJ
DMBX1
SULF1
MEIS2
RGS12
CASC3
DLL4
PRRX1
BFSP1
DTX4
HK3
CLEC18C
MYRIP
KDM2B
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
LRGUK
MALRD1
TBC1D8
TMEM120B
RAI14
PDE6B
FAM118A
JAKMIP1
SYNPO
DDX3X
TPRA1
ASXL3
BRWD1
TLE4
NUTM2D
TMA16
CLGN
ZNF746
PPP1R35
GFRA3
ZCWPW1
MEPCE
NRDE2
CDIP1
HOXB3
ID1
HOXB4
SCGB1A1
CERCAM
TESC
TIGD1
EIF4E2
SOAT2
IGFBP6
ASB6
POP5
DGKZ
HOXA3
HOXA4
ZFHX4
TRIM65
MRPL38
MNT
ARL14EP
MBTPS1
C6orf132
GTF3A
NRXN1
SMARCA2
SLC7A6OS
PRMT7
HOXD3
HOXD4
B3GALT5
CNTLN
TDG
C12orf73
CS
PCBP2
SPHK2
RPL18
FAM83E
FABP7
SMPDL3A
SLC10A2
COL17A1
DUSP6
SYBU
GATA3
FEZF2
ZFHX3
PAX8
PNKD
IL17RD
DAPL1
FOXP2
TMEM212
SOX21
PGLYRP1
IGFL4
TRIM41
RFX2
VOPP1
LRIG1
ZNF341
LRRC1
USP17L21
USP17L20
USP17L12
USP17L22
RNF138
GADD45G
RPS10-NUDT3
RPS10
NRXN2
LRRC4
NCBP3
DMRT3
CCDC43
RNF32
MRPL3
ZNF285
MBNL3
ADGRL2
NEUROD4
RECQL4
LRRC14
MFSD3
GPT
ERCC1
WDR47
SFT2D2
RPS26
CADM3
CPVL
CHN2
ACBD6
RRM1
MXI1
GAD2
SKOR1
NPAS4
SRRM3
MDFIC
TMSB15B
TMEM97
IFT20
CALHM6
RASL10B
ZNF292
CCND1
AQP6
CBFA2T2
CATSPERG
BAIAP2
SLC39A6
ELP2
LDLRAP1
CLEC19A
DUSP2
ASTL
STARD13
DAAM1
MUSTN1
ITIH4
PKNOX2
RCOR2
TCHP
E2F6
TMEM275
CDH16
TPST2
RARA
HNF1A
CHD8
OR8J1
AP1B1
CPLX1
CNN3
C12orf42
SPACA1
TMEM107
HNRNPA2B1
CBX3
CDC42EP2
VANGL2
NEK7
DNAJB2
SALL1
GPR20
CLEC18B
ID2
RXRG
MYO10
CAMTA1
CDX1
GUCY1A1
EVI5
RUNX1T1
PARP11
HHIP
SGK3
FOXP1
MSX2
KMT2A
PEX2
DHX32
SEMA4B
HNRNPD
ZNF891
ZNF10
LRP2
TRDMT1
LEKR1
RHBDD1
RCOR1
ITPRIP
TNNI3K
KAT6A
TUBB3
MC1R
NINL
PLXNB1
RGL1
POLR2J3
MET
FTCDNL1
SCARB1
SEMA6D
PPFIBP2
TBC1D15
ZNF367
NEK3
USP17L13
USP17L11
USP17L18
USP17L10
USP17L17
USP17L15
YAP1
DUSP29
HOXA1
HOXA2
PALM2AKAP2
WDR74
STX5
LEFTY2
RARB
PDE4DIP
S100A10
CDCA7L
FXYD2
PHOX2B
ST18
MAMDC2
ID3
MSX1
CITED2
SP5
MAB21L2
NFE2
CDH18
ARID3B
KCNN4
GATA4
HOXC6
CNTN1
GPR108
NFIA
METTL24
TRIP10
HOXC4
DSCAML1
TLE3
MTRNR2L2
MSH3
DHFR
SP2
GRSF1
IL23R
EXOC2
ARSG
KAZALD1
NCOA7
MTRNR2L1
RPL34
HOXA5
NOTCH2NLB
NOTCH2NLA
TBX3
CYP26A1
OTX1
FRMD7
RASSF2
PAX6
ZNF652
IFI16
SH3BP2
MRPL34
DDA1
ABHD8
HOXC5
INAFM2
BRINP1
IER3
FLOT1
NDUFS7
FGR
PKDCC
PYDC5
TCF7L2
SH3BP1
PLEKHO2
ALDH1A2
MBD2
TMPPE
METTL3
GLB1
CBX4
FKBP1A
DHRS3
SPATC1L
ARHGAP24
RNF149
PDP2
UPF3A
TMEM14A
ERLIN2
ABLIM3
LYL1
MVB12A
METTL11B
C5orf63
CACNA1D
HIP1
PRDM6
SPG7
HUS1
HEXIM2
KDM6B
CMTM7
ETFBKMT
PANK4
HES5
LIN28A
ARID5A
MAGEA11
ABCG2
NEO1
TLE1
SEC14L1
EAPP
KCNAB2
JAK3
STK38
MYBPC3
FBXL18
MRS2
PARK7
HSPA1L
HSPA1A
VIP
TBC1D10C
PPP1CA
PHC2
CCPG1
C15orf65
RPS6KA1
CHODL
SMC6
GEN1
FRAT2
C11orf24
SASH3
NRROS
EMP3
NR1D1
PDZRN3
KAT6B
KMT2E
ATG16L2
POR
RPS24
POLR3A
UBXN10
RASL12
PLA2G2C
KBTBD13
NCOR2
GRHL3
LYPD1
KDM3A
PRDM10
SLCO4C1
TAF12
CCDC88A
SNX1
CIAO2A
RASA4
SPECC1
ARHGEF10L
NADK
ACTB
IER3IP1
ZSWIM6
IRF2BP2
CARNS1
LMO4
SNCG
MMRN2
KLF17
FGFRL1
PAX3
RPLP1
HAND1
BIN2
ENO1
WDR6
NBEAL2
CCDC12
FOXB1
NKD1
SKIV2L
NELFE
PSTPIP1
EFHD2
KITLG
FAM110A
MEOX1
RASA4B
ADM
NCOA2
REV3L
TMEM104
NAT9
SHOX2
RSRC1
MTMR4
ATP23
CAND1
TBL2
STIL
SMURF1
OTUD7B
CLDN11
DIAPH1
ZNF76
CCDC114
NBPF1
USP15
CCDC102A
SLC39A7
RXRB
HSD17B8
PLEC
WNT10B
SNX3
ING1
CARS2
LRRN4
MEF2C
TRAF4
MTRNR2L8
MEF2D
AHNAK
VAV1
SH2D3A
GSTT4
CABIN1
ACSS3
HOXC8
ZNF775
RASSF5
LPCAT3
LNPEP
BHLHE40
TMEM242
SLC2A9
RARG
IMPG1
ZNF740
CSAD
CPSF4L
NEBL
LIG3
DENND2D
PPP1R18
NRM
CDC42EP3
IRX5
CCDC174
DIAPH3
GGCT
IQCH
AAGAB
RPL17-C18orf32
RPL17
REC8
NFKBIA
CCKAR
HEBP2
CBFA2T3
ZCCHC3
GATA6
C20orf96
ZFYVE28
CFAP99
ZDHHC1
DMD
CD38
BCL3
BNC2
POLD2
ZNF414
HOXB5
SKI
INAVA
CNOT2
TRERF1
RAC2
LRIG3
ZNF718
ZNF595
CMTR1
TTC13
ARV1
PCNA
CDS2
TUBA1C
TUBB
MDC1
IQGAP2
KHDRBS1
LFNG
SUPT4H1
SLC38A10
SCAMP4
ADAT3
RXRA
TYRO3
NDRG1
MYO1G
NTRK2
OPA3
LOC102724265
RNASEH2B
CREB5
GPAA1
EXOSC4
MYO1B
PPIB
MINDY2
PTK2B
DCSTAMP
H6PD
SLC9A1
SIRT4
FTL
DISP2
PDPN
ADGRG5
GALNT10
KBTBD11
PKN2
COL11A2
NDFIP2
MAPKAPK3
CISH
PLCB2
SMAD3
FOXA2
CDK5R1
AGTRAP
USP3
ADCY7
H2BU1
H2AW
ERI3
TRIM48
SHB
SEPTIN4
NKIRAS1
RPL22
RNF207
TXNRD1
MUC12
PEX14
DFFA
BST2
GFI1
MOBP
MYO1F
FAM120B
NAA10
ARHGAP4
KCNH2
CYP51A1
YTHDF2
SMARCD2
PKM
NAA80
IFRD2
HYAL3
PCTP
PRDM1
HESX1
ELANE
CFD
ZNF397
PPCDC
BAX
MRPS24
RABGAP1L
CYP2E1
SLC35E2B
NOTUM
NDUFV1
TBRG4
HNRNPF
KIF5C
CCND3
NR1D2
ADORA2A
COL23A1
C1orf105
RNF166
CTU2
CYCS
TAF15
RNF139
RAB11B
IGF2BP3
ANKRD1
SH3TC1
DYNLL1
GSPT1
TMEM9
SP7
CRYBG1
EVX2
CNTN4
DGAT2
ZDHHC4
CEP41
HMGCS1
ARIH2
SYTL1
SYTL3
MECOM
ABHD17A
CBWD5
CBWD3
SCNN1A
LTBR
RNPEPL1
DUSP28
ANKMY1
DPP9
SBF1
PIK3AP1
CLIC4
BNIP2
ARID2
THRAP3
SOD2
KCTD6
CPT1A
PTP4A2
IL6R
PRSS56
CHRND
AKIRIN1
LAT2
SLC35E2A
ZFX
DHX16
ABHD11
KANSL3
FER1L5
CYTH4
MYEOV
PDE4D
CLDN9
PTGES3
FOS
AGO1
PCDH11Y
NR2C1
MAGIX
MBD6
GAS7
DDIT3
TMEM222
FAF2
NECTIN1
C12orf50
C12orf29
RND3
SRPRA
SMUG1
RBL2
KCNIP4