ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GH1
MAMDC2
SMCO1
RAB37
KRBA1
NUF2
UBC
KCNJ15
TTLL1
WDR74
FRG2C
CCDC130
PRSS38
MTRNR2L2
MSH3
DHFR
ADAMDEC1
MMEL1
DCP1A
RERE
LOC102724265
ZNF761
HTR5A
TTLL12
ITGB3BP
EFCAB7
MTRNR2L1
FAM184A
BSDC1
RABGAP1
GBA
LCE3A
LCE3B
FRG2
NPAS4
MTRNR2L8
STX16
CXCR2
SLC24A1
PDE4DIP
SLC44A1
PCDH1
DEFA6
DRG2
PMF1-BGLAP
PMF1
ZNF623
KRTDAP
ST20-MTHFS
CLDN18
FAM207A
COMMD2
TSC22D3
ZFP30
GNG13
PEX3
ADAT2
PARP15
FAM72C
FAM72D
OR2A12
DUX4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF76
CADPS
GNAL
APOA1
NWD1
ZNF317
FAM209A
APRT
POLE4
IFIT1B
TARS2
RAD54L2
RNF217
EIF2D
YTHDC2
TRIM9
SLC44A2
MTF2
GTF2H2
MTNR1B
SSBP1
ZNF670
DNAH14
SUB1
ANP32D
FAM227B
DTWD1
IMMT
TMEM229B
MATK
GALK2
ATP1A1
COPS2
SF3A3
C1orf100
PSMF1
ZNF324B
ACYP2
DOCK3
SLAMF9
CDHR1
COL23A1
GPD1L
INTS5
NRF1
C2orf88
CABIN1
BCL9
WDR11
TIAM1
SCRT2
PDE7B
DOCK7
CPNE5
IPO4
SAMD4B
SRRM3
SMIM17
ALG10B
PGBD2
NDUFS3
KBTBD4
PRMT5
FUT8
HSD17B6
NSFL1C
EPB41L4B
MRPL16
DNAJC22
RBBP5
TRIM48
MUC3A
FAM72A
TRIM29
INTS12
GSTCD
TPM1
TRADD
FBXL8
B3GNT9
IGFALS
STX18
METAP1D
FBXO17
MST1R
TRIP4
CCNC
STX6
MFAP3L
DCAF10
FOXO1
MRPL22
GEMIN5
AURKAIP1
SLC27A5
WDFY1
S100P
FAM72B
VPS13D
NTSR2
DMAP1
NDUFS7
ATP5MC2
TRAM1
RGPD8
RGPD5
RGPD6
VMO1
GLTPD2
PLIN1
PDE11A
HMGB1
USPL1
GABPB2
LRRC37A3
GNB3
DNAJC25-GNG10
DNAJC25
RPS14
B4GALT7
EEF2K
LRRC59
AADAC
RPL27
USP30
SEC13
ANKRD40
ZNF205
TATDN3
NSL1
GTF2H2C_2
GTF2H2C
RGPD2
RGPD1
AKIRIN1
EXD2
DPY19L4
TMEM41A
C10orf88
TVP23B
HMOX1
TEX38
ATPAF1
DRAM1
CTAG1B
CTAG1A
MED23
UIMC1
OPA1
NFAT5
RPS29
SLC33A1
SLC39A13
HERC3
PYURF
PIGY
DEGS2
BCR
ATR
PRELID3B
NEUROD4
DSTYK
PPA2
BARHL1
GTF2A1L
DHRS2
DYNC1LI2
OR10G2
JMJD1C
REEP3
TLE5
RBBP8NL
LEP
MNAT1
LRRC10B
RNF24
WDR36
CCSER2
MTHFD2L
TUBGCP3
TSPAN14
BCAR3
MRPL3
ANKRD46
PRRG2
NOSIP
TSNAX
AKNA
TOR1AIP2
TOR1AIP1
TMED1
MKRN2OS
MKRN2
TACO1
SNRPB
PDE4C
CEP135
TPBGL
AKAP13
LHX6
KMT2A
CPLX2
REXO4
ADAMTS13
RRP15
RHOT2
TCF3
TEFM
DRAP1
C11orf68
SPRR2F
SPATC1L
DLG2
CBX1
TRIM16L
ISM1
TNFRSF13B
ZNF829
ZNF568
POLR2C
RNF168
CCDC200
TMEM259
CNN2
MFAP3
FAM114A2
PPFIBP2
IL10RB
KRTAP10-12
TRMT61B
AGK
CFAP73
DYNC1I1
ANGPTL4
DUSP6
SCMH1
AQR
C16orf89
DHTKD1
TMEM39B
GRPEL2
ZNF438
ALDH3A1
LRP2BP
EIF3F
CCDC115
GRM4
TCF7L2
ACAA2
ALKBH3
CDC73
CHD1L
PRKAB2
NUAK2
BRF2
CYREN
SV2A
TMEM89
PAXBP1
MAPK1IP1L
ZER1
YPEL1
ST6GALNAC6
DCLRE1B
AP4B1
GNB2
ZNF354B
SCCPDH
HUS1
CRLF3
EPS8
RNF149
EGFLAM
PPIP5K2
SPSB1
ZMIZ2
FAM102A
DHX8
ANXA11
PDS5A
GTF3C3
ZNF527
UTP11
XKR8
STRBP
NME1
TMEM43
CHCHD4
NKAIN4
STX1A
LAMP1
GUSB
TOP3B
IQSEC3
EP400
CXCL6
CREG2
TMPRSS11F
IRAK2
FRG1
CCDC107
MRPL44
SDHAF3
DDX1
CLK3
GTF2H4
TMA16
DAG1
ZNF697
CIAO3
RPL37
INO80C
FAM98B
SUPT4H1
UBA52
DPH6
CD86
RASSF8
CLEC19A
POLR2J3
EPB41
CLUAP1
C16orf90
WWOX
CALM1
PRAMEF33
PRAMEF10
NFKB2
RBM39
FSHB
NRG3
KRTAP10-7
LUC7L2
FMC1-LUC7L2
FMC1
CCAR2
C8orf58
GLIPR1L1
CAPS2
TBL3
RNF151
WIZ
USP54
VSIG10L
YJU2
IRF9
CTNNB1
ZNF621
MED12L
IGSF9
C19orf18
DUS1L
TSPAN10
NPLOC4
RSAD1
SLC35G4
NOD2
ABCA3
WDR31
PLEC
UGT2B4
RPS7
MTERF4
CCDC88B
ATP2C1
ATP5MPL
PSEN2
C10orf95
OR4K17
TDP2
ACOT13
TTC26
ZNF286A
BLOC1S5
ANKRD52
ANKRD2
FRMD5
SLC25A51
SMARCD2
FUT10
NOTCH2
RPL6
JOSD2
ASPDH
PTPN11
RAPH1
SCIMP
ZMYM3
CERS3
ILF2
PPP6R1
TMEM222
ANKRD36
FNTB
SNX19
DGKA
FXN
FAM162A
CCDC58
PYM1
C9orf152
TTC32
TMEM68
TGS1
EPRS1
GTPBP3
ANO8
ADRM1
TNFAIP3
FECH
LPCAT4
ZSCAN22
ZNF557
MAEA
LUC7L
TBCD
FPR3
SEC22B
C8orf37
SELENOT
RILP
TDRD7
SFT2D2
SQSTM1
FRAT1
MGAT4B
SNRPB2
B3GLCT
VWC2L
CFAP36
SNAPC2
SRD5A1
NSUN2
CLDN8
MAD1L1
TRMT5
SLC38A6
NDUFB3
FAM126B
COG2
FAF1
FAR1
KMT2C
MYO9B
HAUS8
HOXB9
SUPT7L
SLC4A1AP
ZNFX1
KANSL3
FER1L5
TMEM114
SESN1
CEP57L1
FAM71E1
EMC10
CFAP45
C1orf68
IL36RN
IL36B
C17orf75
CCDC33
CYP51A1
FZD1
PLK1
TMCO1
DPH7
RASA2
CAPN2
CLN6
LTB4R
LTB4R2
CIDEB
CARMIL2
EHF
PDCD7
TMEM242
CEP72
VPS13B
CRYAB
TMEM18
ARHGAP40
MRPL55
RNF7
FKTN
IRF5
NAA60
C11orf52
PRR15L
MAPRE2
SMIM31
RBBP9
SLTM
MRPL21
IGHMBP2
SNRPE
ABR
SAYSD1
NUP155
ERI1
SMPD2
PPIL6
RBPJ
DPP9
LARS2
DNAJC11
SLC9A1
HMGN4
ZNF891
ZNF10
YIPF2
TIMM29
PRKCZ
ZNF721
PIGG
TPR
ODR4
CGGBP1
C3orf38
RNF11
TJP3
USP22
POGK
ACKR3
CLDN19
ROCK2
SLC39A14
CASZ1
ATXN2L
ADAM22
NCF4
C5orf49
OR2T1
C7orf25
RNF145
EIF3G
NAXE
CHAC1
MTR
DISP1
MRPL38
WDR41
ZNF197
BPTF
CCDC112
CACNA1S
ASCL5
TBC1D19
SEM1
NCOA7
AARS2
FAM133B
CRH
DDX46
CYB561D1
RARS1
KDM3B
HARS2
HARS1
HES3
FAM3C
PLAGL1
MFSD4B
MKRN3
ZBTB26
RGL1
PCBP3
AQP4
TNFAIP2
PHKG1
HPCAL4
UBE2F
FRA10AC1
SLC39A3
DLC1
RABIF
ZNF33A
SNX18
CITED2
ACO1
MECOM
SLC37A4
NOMO3
CACNA1E
OR4X2
METTL9
CCDC174
MRPL34
TIPARP
EXOC2
TMEM248
SIKE1
NPL
ABHD8
DDA1
ZNF879
C11orf80
TP53I3
KRTAP12-2
ADPRHL1
SLC26A5
SPATA22
MRPL1
IAH1
METAP1
RBM28
TBPL1
SYT7
NDUFAB1
NSUN3
DHFR2
SPAG8
HINT2
STK39
SCOC
ADPRH
OR10A3
ZNF582
AFAP1L1
CASC3
NMNAT1
LZIC
PLEKHM1
RBL1
ZNF484
CRNKL1
CFAP61
FLYWCH2
CD8A
CAMKK1
BNIP1
BAIAP2
TSKU
TMEM205
CCDC159
MGST3
RAB3D
FOXN3
ATG16L1
LRRC37B
WASHC5
NSMCE2
MT1X
PABPC4
EDARADD
ZNF572
CLUL1
KNL1
COIL
DGKZ
VPS25
PRR14
WDR7
NHSL1
EFCAB13
GALNT10
MRPS22
ASB6
GUF1
BIN1
DNAAF4
AASDH
VAMP4
EDC4
ABL1
B3GAT2
LRP11
SCGB1C2
SCGB1C1
BANP
FGFBP3
RALBP1
ZC3H6
YWHAZ
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF354C
DUOXA2
DUOXA1
DUOX2
SIGIRR
MAP3K13
UTP3
RNF6
ZNF350
ZRANB2
AJUBA
FAM24A
ZNF529
TET3
CACHD1
XYLB
C1orf115
FRMPD1
CYP4B1
GSTM5
DHX16
ZNF331
PET117
KAT14
GGCX
FETUB
GPRIN2
FBXO22
ARHGAP22
HDAC11
SECISBP2
BARX2
COX16
PUM1
MRPS31
POLR3E
FBXW7
CD55
ZNF839
THAP4
ATG4B
ZNF219
TMEM253
TESPA1
RABGEF1
SREBF1
ZP3
DUSP4
BTBD11
ZDHHC3
MRPL40
HIRA
MRPS18C
HELQ
COX7A2
OR2AP1
SF3B6
FAM228B
HNRNPD
DISC1
NUDT7
TIMM9
KIAA0586
BACH2
TNFAIP1
IFT20
PDAP1
BUD31
GPCPD1
C3orf80
SPOCK1
METTL21C
TRIM8
SLC16A1
TSNARE1
ASL
FAM124A
CD53
CRISP1
CANT1
C18orf21
TRAF6
RAG1
SAXO1
PTPN4
FKBP5
PSMA1
FOXJ3
FAM50B
ARAP1
ZSCAN9
RRAGA
NOP56
VPS28
SPCS1
GLT8D1
SLC26A9
ANKRD62
PKD1L1
MT1B
TSFM
FOXN1
MSL2
NDUFC2-KCTD14
NDUFC2
CMTM3
PDE8A
IBA57
VPS4A
VANGL1
CHD9
DEF6
MALL
HSPE1-MOB4
HSPE1
HSPD1
MDM4
MICALL2
KRT3
KIAA1217
POLR2J2
KLHL20
DNAJC24
DCDC1
ZNF609
CRKL
WDR43
TAMM41
RALGDS
CCDC69
EPB41L5
C19orf53
YIPF4
ZNF77
NDUFA2
IK
SALL3
CFHR4
PRKAG2
TUT1
ARHGEF12
POLG
TUBB
MDC1
LIMD1
FITM2
L3HYPDH
JKAMP
ZGRF1
LARP7
ERCC4
RUFY1
ZNF232
USP6
PAG1
HASPIN
ZFYVE19
DNAJC17
SDK1
JAK1
ERGIC1
RAMP3
HHLA2
CALCB
NUP54
ZNF383
ZBED9
GCFC2
ZNHIT3
ZNF771
NLRX1
CPE
NUFIP2
MARCHF11
FAM47E
PFKFB4
ABCB1
ITM2C
TLL2
FAM47E-STBD1
FAM151B
ELMO2
SERPINA11
YPEL3
SNX16
DNAJB12
SNX17
EIF2B4
NBN
UCHL3
COMMD6
FOXRED2
ERMP1
KIF11
GSTO2
PRKN
PACRG
IGFBP3
ISM2
DPH2
CELF1
LINGO1
TXNDC15
SYT3
DNAJC1
STK10
GNPAT
C1orf131
HAUS5
IPO9
GPX3
SMKR1
ZNF554
PRPF18
CRBN
GTDC1
PDHB
NYAP1
PDSS2
INAFM2
RNF43
CYP20A1
GDPD1
TBCCD1
DNAJB11
GFUS
CHRNB2
TNRC18
CD300LG
BLNK
RNF223
PRRT1B
SLC2A7
CPPED1
MEMO1
BORCS7
PRMT3
KCTD5
GCLM
PKIG
VPS37D
SMC6
GEN1
CASQ1
SPTLC2
DDX23
ATP6V0C
PPIG
NOP16
HIGD2A
ALG10
NUP107
MIER1
EVPL
TRIM41
CMC1