ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
NUF2
UBC
KCNJ15
TTLL1
WDR74
CCDC130
MTRNR2L2
DCP1A
RERE
LOC102724265
HTR5A
TTLL12
ITGB3BP
EFCAB7
BSDC1
RABGAP1
GBA
NPAS4
MTRNR2L8
STX16
SLC24A1
PDE4DIP
SLC44A1
PCDH1
DRG2
ZNF623
FAM207A
COMMD2
ZFP30
PEX3
ADAT2
FAM72C
FAM72D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF76
CADPS
GNAL
NWD1
APRT
POLE4
TARS2
RAD54L2
EIF2D
YTHDC2
TRIM9
SLC44A2
MTF2
GTF2H2
SSBP1
ZNF670
SUB1
FAM227B
DTWD1
GALK2
ATP1A1
COPS2
SF3A3
PSMF1
INTS5
NRF1
CABIN1
BCL9
WDR11
SCRT2
PDE7B
DOCK7
IPO4
SAMD4B
SRRM3
ALG10B
PGBD2
NDUFS3
KBTBD4
PRMT5
FUT8
NSFL1C
MRPL16
DNAJC22
RBBP5
FAM72A
TRIM29
INTS12
GSTCD
TPM1
STX18
METAP1D
TRIP4
CCNC
STX6
MFAP3L
DCAF10
FOXO1
GEMIN5
AURKAIP1
WDFY1
FAM72B
VPS13D
NTSR2
DMAP1
NDUFS7
ATP5MC2
TRAM1
RGPD5
RGPD6
GLTPD2
PDE11A
HMGB1
USPL1
GABPB2
LRRC37A3
DNAJC25-GNG10
DNAJC25
RPS14
B4GALT7
EEF2K
LRRC59
RPL27
USP30
SEC13
ANKRD40
ZNF205
TATDN3
NSL1
GTF2H2C_2
GTF2H2C
RGPD1
RGPD2
EXD2
DPY19L4
TMEM41A
C10orf88
TVP23B
ATPAF1
DRAM1
HMOX1
MED23
UIMC1
OPA1
NFAT5
RPS29
SLC33A1
SLC39A13
HERC3
PYURF
PIGY
ATR
PRELID3B
NEUROD4
DSTYK
PPA2
BARHL1
DYNC1LI2
JMJD1C
REEP3
RBBP8NL
MNAT1
LRRC10B
RNF24
WDR36
MTHFD2L
TUBGCP3
BCAR3
MRPL3
ANKRD46
PRRG2
NOSIP
TSNAX
TOR1AIP1
TMED1
MKRN2
TACO1
SNRPB
PDE4C
CEP135
TPBGL
AKAP13
KMT2A
CPLX2
REXO4
RHOT2
RRP15
TCF3
TEFM
DRAP1
C11orf68
SPATC1L
DLG2
CBX1
TRIM16L
ISM1
ZNF829
ZNF568
POLR2C
CCDC200
TMEM259
MFAP3
FAM114A2
PPFIBP2
TRMT61B
AGK
DYNC1I1
DUSP6
AQR
C16orf89
DHTKD1
TMEM39B
GRPEL2
ZNF438
EIF3F
TCF7L2
ALKBH3
CDC73
CHD1L
PRKAB2
BRF2
CYREN
PAXBP1
MAPK1IP1L
ZER1
YPEL1
DCLRE1B
AP4B1
GNB2
ZNF354B
HUS1
CRLF3
EPS8
RNF149
PPIP5K2
ZMIZ2
DHX8
ANXA11
PDS5A
GTF3C3
ZNF527
UTP11
XKR8
STRBP
NME1
TMEM43
CHCHD4
LAMP1
GUSB
TOP3B
IQSEC3
EP400
CREG2
TMPRSS11F
FRG1
CCDC107
MRPL44
SDHAF3
DDX1
CLK3
GTF2H4
TMA16
DAG1
CIAO3
ZNF697
RPL37
INO80C
FAM98B
SUPT4H1
UBA52
DPH6
CLUAP1
WWOX
CALM1
RBM39
NRG3
KRTAP10-7
LUC7L2
FMC1-LUC7L2
CCAR2
CAPS2
TBL3
WIZ
USP54
IRF9
CTNNB1
YJU2
ZNF621
MED12L
IGSF9
DUS1L
TSPAN10
NPLOC4
RSAD1
ABCA3
WDR31
PLEC
RPS7
MTERF4
ATP5MPL
PSEN2
C10orf95
TTC26
TDP2
ACOT13
ZNF286A
BLOC1S5
ANKRD52
FRMD5
SLC25A51
SMARCD2
FUT10
NOTCH2
RPL6
JOSD2
PTPN11
RAPH1
ZMYM3
ILF2
PPP6R1
TMEM222
ANKRD36
FNTB
SNX19
FXN
FAM162A
CCDC58
PYM1
C9orf152
TTC32
EPRS1
GTPBP3
ADRM1
TMEM68
TGS1
ANO8
LPCAT4
FECH
TNFAIP3
ZSCAN22
LUC7L
TBCD
ZNF557
C8orf37
SELENOT
SEC22B
RILP
TDRD7
SFT2D2
FRAT1
SQSTM1
MGAT4B
SNRPB2
B3GLCT
VWC2L
CFAP36
SNAPC2
CLDN8
TRMT5
SLC38A6
NDUFB3
FAM126B
COG2
MAD1L1
FAF1
FAR1
KMT2C
MYO9B
HAUS8
HOXB9
SUPT7L
SLC4A1AP
KANSL3
SESN1
CEP57L1
FAM71E1
EMC10
CFAP45
C17orf75
CYP51A1
FZD1
PLK1
TMCO1
DPH7
RASA2
CLN6
LTB4R
LTB4R2
CIDEB
CAPN2
TMEM242
CEP72
VPS13B
TMEM18
MRPL55
RNF7
FKTN
IRF5
NAA60
C11orf52
PRR15L
MAPRE2
RBBP9
SLTM
MRPL21
IGHMBP2
SNRPE
SAYSD1
NUP155
ERI1
SMPD2
PPIL6
DPP9
LARS2
DNAJC11
SLC9A1
HMGN4
ZNF891
ZNF10
YIPF2
TIMM29
ZNF721
PIGG
RBPJ
TPR
ODR4
CGGBP1
C3orf38
RNF11
TJP3
USP22
POGK
ACKR3
ROCK2
CASZ1
ADAM22
ATXN2L
C5orf49
C7orf25
RNF145
EIF3G
NAXE
MTR
DISP1
MRPL38
WDR41
ZNF197
BPTF
CCDC112
ASCL5
TBC1D19
NCOA7
AARS2
FAM133B
DDX46
CYB561D1
KDM3B
RARS1
HARS2
HARS1
HES3
FAM3C
MFSD4B
PLAGL1
MKRN3
ZBTB26
RGL1
AQP4
HPCAL4
PHKG1
FRA10AC1
SLC39A3
DLC1
RABIF
ZNF33A
SNX18
CITED2
ACO1
SLC37A4
NOMO3
CACNA1E
METTL9
CCDC174
TIPARP
EXOC2
TMEM248
SIKE1
MRPL34
ZNF879
TP53I3
NPL
ADPRHL1
SPATA22
KRTAP12-2
MRPL1
RBM28
SYT7
TBPL1
NDUFAB1
NSUN3
DHFR2
SPAG8
SCOC
IAH1
CASC3
NMNAT1
LZIC
PLEKHM1
RBL1
CRNKL1
CFAP61
ZNF582
ZNF484
CD8A
BNIP1
MGST3
FOXN3
ATG16L1
LRRC37B
WASHC5
NSMCE2
MT1X
PABPC4
KNL1
CLUL1
COIL
VPS25
DGKZ
PRR14
WDR7
GALNT10
MRPS22
ASB6
NHSL1
GUF1
BIN1
AASDH
VAMP4
EDC4
B3GAT2
LRP11
FGFBP3
RALBP1
ZC3H6
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
ZNF354C
SIGIRR
MAP3K13
YWHAZ
UTP3
RNF6
ZNF350
ZRANB2
AJUBA
ZNF529
TET3
XYLB
C1orf115
FRMPD1
CYP4B1
DHX16
PET117
KAT14
ZNF331
GGCX
FBXO22
ARHGAP22
SECISBP2
BARX2
COX16
PUM1
MRPS31
POLR3E
ZNF839
ZNF219
DUSP4
BTBD11
MRPL40
HIRA
MRPS18C
HELQ
COX7A2
SF3B6
FAM228B
HNRNPD
DISC1
TIMM9
KIAA0586
NUDT7
BACH2
TNFAIP1
IFT20
PDAP1
BUD31
GPCPD1
C3orf80
SPOCK1
SLC16A1
TRIM8
TSNARE1
ASL
FAM124A
C18orf21
TRAF6
RAG1
PTPN4
PSMA1
FKBP5
FAM50B
ARAP1
ZSCAN9
SAXO1
RRAGA
NOP56
VPS28
SPCS1
GLT8D1
ANKRD62
TSFM
NDUFC2-KCTD14
NDUFC2
PDE8A
IBA57
VPS4A
VANGL1
MSL2
CHD9
DEF6
MALL
HSPE1-MOB4
HSPE1
HSPD1
MDM4
KLHL20
DNAJC24
DCDC1
CRKL
ZNF609
WDR43
TAMM41
EPB41L5
C19orf53
YIPF4
CCDC69
NDUFA2
IK
ZNF77
TUT1
POLG
MDC1
ARHGEF12
FITM2
L3HYPDH
JKAMP
ZGRF1
LARP7
ERCC4
RUFY1
ZNF232
PAG1
HASPIN
ZFYVE19
DNAJC17
SDK1
JAK1
LIMD1
NUP54
ZNF383
GCFC2
NLRX1
CPE
NUFIP2
ZNHIT3
MARCHF11
FAM47E
ITM2C
TLL2
FAM47E-STBD1
FAM151B
ELMO2
YPEL3
SNX16
DNAJB12
SNX17
EIF2B4
NBN
UCHL3
COMMD6
FOXRED2
ERMP1
PRKN
PACRG
IGFBP3
ISM2
CELF1
LINGO1
TXNDC15
DNAJC1
STK10
IPO9
HAUS5
SMKR1
PRPF18
CRBN
PDHB
GTDC1
PDSS2
INAFM2
ZNF554
RNF43
CYP20A1
GDPD1
TBCCD1
GFUS
CHRNB2
CD300LG
RNF223
CPPED1
MEMO1
BORCS7
PRMT3
GCLM
KCTD5
PKIG
VPS37D
SMC6
GEN1
SPTLC2
DDX23
ATP6V0C
PRRT1B
PPIG
NOP16
HIGD2A
ALG10
NUP107
MIER1
CMC1
CYP2R1
CEP126
CFAP410
ANGEL2
CBFA2T2
S100A8
SORL1
LRRC26
PLA2G2C
EVPL
ZMPSTE24
STAT3
GFM2
WDR70
SARAF
ANKAR
ZNF337
MAPK8IP3
LRP12
UBA2
RNF135
YOD1
TMEM185B
PFKFB2
MRPL30
MITD1
RIF1
SACM1L
NUP214
TNFRSF10D
GABARAPL1
PSMC1
TMEM14A
RAB3C
ZNF746
GINM1
DNMT3B
GPAT3
PRKACA
GCH1
ARHGAP28
RHBDL2
SNAP47
JMJD4
TTC4
ZNF165
TIGD1
EIF4E2
RETSAT
ELMOD3
ZNF326
ZZZ3
ARL8B
RGPD8
JRK
WASHC2C
GDF11
RANBP3
LPIN3
CREG1
HSD17B4
KLKB1
CLTB
MOB4
CDK5RAP1
BANP
PPIH
HIBADH
ZNF354A
NOXA1
THOC3
LNPEP
HEXA
NSG2
NUDT17
TUBE1
FAM229B
ADCK5
OGT
PKIB
MAF1
ATP23
MTG1
ZNF717
COX10
CSRP1
DOP1B
SELENOH
MRPS14
RMND1
ARMT1
PARK7
TMEM106B
BUD13
PRKCSH
CCDC151
ATP6V0D1
RPL10A
ZNF827
PDE4D
RBM17
MON1A
GTF2IRD2
SLC66A3
XRN1
FRMPD2
IGIP
ZNF391
TARS3
DDX41
H4C8
TOMM20
PPP1R8
SLC25A21
SRI
C1QBP
SRGAP1
BEND3
MCC
PYGO2
LOC101928120
SUDS3
FLYWCH2
C4orf48
SORBS3
FMC1
R3HCC1
IPO13
FSIP2
IL11RA
ERLIN2
ZNF843
SLC22A5
PRKAG1
ZNF71
ZNF441
SOCS1
SMPDL3B
MNX1
MAN2C1
KCNH1
RBSN
TSKU
ERCC5
DSE
HSPA6
BUB1B
PTBP2
DST
USE1
BEND6
DPY19L1
TSPYL4
GSX1
TAF8
UBE2E2
ARHGEF26
FAAH
SOD2
UCHL5
RO60
YTHDF2
RESF1
ANKRD36B
BAZ2A
ATP5MF-PTCD1
ATP5MF
KANSL1
SPATA4
TBCE
ADRA1A
ARID5B
LTBR
DDX18
SCAND1
MTOR
FAM234A
EIF5B
ZNF212
RNF220
TXNDC9
KIF15
KIAA1143
EDEM2
DTWD2
CDC7
KIF22
ZNF585B
DHRS4L2
TCAIM
HERC5
BTG1
SUCLG2
REXO1
PCLO
COA8
BAG5
DNAH9
NR1H3
ACP2
RPL5
STOML2
RAD52
ADNP
VPS72
CSTF1
AURKA
TAS1R1
NOL9
SEMA6A
DTD1
ZNF180
HCN1
TMEM106C
CCDC66
SARS2
MRPS12
ERN1
RGS9
MOK
SIAH2
PLA2G10
PLEKHM3
NAA20
HIGD2B
BBS4
AMN1
FAAP20
TBRG4
C7orf26
NDUFA12
ATAD2B
KAT7
TIAL1
CNOT6
PARP16
SLC49A4
ATP5F1E
PRMT2
DAD1
PRKAR2A
FAXC
PRR18
LSG1
RNF187
RPS15
BRIX1
MAP7
CDK5RAP3
TLCD4
TLCD4-RWDD3
IDH3B
EXO1
LOC100287896
LIPT2
NCOA5
ACAD9
LDHD
MAGOH
SPEF2
CIZ1