ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3401281 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◣ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

SNX16
GREB1
SLC45A4
HEXA
WASHC2A
MTRNR2L2
LAMP1
MTRNR2L8
WASHC2C
AP5Z1
RAE1
SLC4A2
NEURL2
CTSA
UBE3C
MEF2C
TNC
KCNMA1
PASD1
SUMO3
SH3GL1
GET4
ANKS6
HM13
DAZAP1
MIER1
SUSD4
SLK
ADGRB3
CLCN7
FGGY
ALG6
SHLD2
GLUD1
SUMO2
CCDC200
SCAMP5
PTBP1
ADAM23
ST7
OTUD7A
KAT5
ARHGAP32
ARID5B
COMMD9
SMARCA4
BLOC1S4
RALGDS
NPEPPS
STAU2
STRA6
MYCL
ACVR1B
TBL1X
SBK1
AP2A2
NSD1
TFDP1
SKIL
GRHL1
PRKCA
SFXN1
RABGAP1L
CLSTN1
NSF
SAP30
FLYWCH1
TM2D2
ADAM9
CBX7
FBXL3
ZNF668
MINDY2
CHD7
FASN
UBE2E2
CACNA2D2
SPTAN1
MRPL45
PLEKHF2
SUMF1
NDUFA4
KDM7A
WBP1L
ACTN4
PPP5D1
CALM3
DTNB
PHF21A
CFAP206
CUTC
COX15
C17orf58
PRKCE
MSS51
FCHSD2
PATZ1
C1QTNF1
IKZF2
PHIP
DIP2A
IGF1R
PCIF1
LASP1
WDR74
UBXN2A
NFASC
KDM1A
USF2
UPF1
ATXN7L3
CHIC2
OAZ1
ADCY9
CLN3
PTPRG
LYPLAL1
ATP6V0D1
IRF2BP2
LCOR
EFNA3
BSG
LYPLA1
CABIN1
MELK
ZBTB14
ZNF217
IFT140
CRAMP1
CCDC88A
SLC25A11
RNF167
AUTS2
PVALEF
AATK
SLC35A5
SCYL3
ATG3
TRMO
PEAK1
HMG20A
USP28
GAB2
EIF4H
MRFAP1
GNB1
PKNOX1
ZBTB18
RYK
CTBP1
STAT5B
LIFR
PTBP3
MLLT10
NUDT3
PARD6B
MDM2
SMURF1
CBX6
C3orf70
FEZ1
NEK6
MAST2
ATOH7
ARPC2
SPRTN
EXOC8
DNPEP
C20orf141
PWP2
LOC102724159
ANKZF1
NF2
PTP4A3
RABEP1
RMND1
ARMT1
SNX19
SLC6A6
APBB1
AMMECR1
AVEN
TMEM266
RBKS
BABAM2
BTBD3
SRSF6
NAGPA
EXOC6
HHAT
AMOTL1
TENT2
PRMT3
MRGBP
LFNG
RRAGC
FBXL5
ACACA
THAP1
TCTA
RHOA
RALGPS2
P4HB
SNX12
MYOG
RGPD2
RGPD1
FHL2
SPNS1
UBAP2L
GPSM1
C1orf43
YEATS2
PXN
FZR1
GFER
UBXN4
SGPL1
ZC3H7A
SULF1
DOK7
PTPRF
WWP1
SIAH1
TAOK1
ARRDC3
THAP12
GVQW3
AFAP1
NCOA5
UBE2E3
MAZ
ZNF787
MTRNR2L9
GBA
DENND2B
BAX
HAGH
FAHD1
ZNF507
PAPSS1
DUSP6
NSD2
MTHFR
CLCN6
UBE2Q1
PSMA1
AMDHD2
VPS33A
RUFY1
HP1BP3
MCOLN1
TSPAN7
SINHCAF
SYNCRIP
LGALSL
MTMR3
FRMPD1
MRFAP1L1
SEMA3D
GPAT4
SRCIN1
FZD3
C12orf66
GNA13
SCML1
PPARGC1A
CPEB2
LARP1
CLIP1
HSP90AA1
TADA2A
SPEN
RBM14-RBM4
RBM14
C15orf61
THUMPD2
PTK2
UBTF
PDE4DIP
MPP6
MAPK8IP1
LUC7L2
FMC1-LUC7L2
FMC1
OSTF1
NMRK1
ABCA5
SSBP4
RXRA
PDIK1L
PPP2R5A
C10orf95
TNNT1
KLF16
PDS5B
MAP3K2
MCM9
FREM1
ROCK2
ZAR1L
ENTPD4
BRCA2
DCK
GRAMD4
RNF152
GNB4
MAP4K3
TRMT2A
RANBP1
CDON
HNRNPU
PPP4R2
BRD4
LRRC20
THOP1
TP53BP2
REST
DENND1A
ASPH
DHX15
FAM81A
NELFCD
SYNPO2L
POLR2J3
HNRNPH2
GLA
DLGAP4
PAIP2
HIF1A
CTNNA2
CDKL5
ATXN7L2
TMCC1
ATP6V1G1
MAP4K1
EIF3K
LIMA1
PRR7
PDE3B
SPCS3
CNOT8
CDK4
METTL9
HRCT1
MYBPC2
LARP4B
YTHDF2
RUVBL1
EEFSEC
SPAST
SFR1
CXCL8
RAD9A
VOPP1
MAPT
TARBP1
LRIG3
PPP6R2
SMARCB1
LPIN2
OPN3
CHML
NEURL1
C9orf40
CHEK1
B4GALT2
MADD
SUZ12
MYO1D
POLE4
SRSF4
DGLUCY
ARHGEF12
ATXN2L
IFI44L
RAB6A
WDR45B
SMYD1
JMJD1C
KIF1C
KANSL3
INCA1
NEO1
NFRKB
INO80C
PCID2
CUL4A
CCN2
FAM168B
MXRA7
LCORL
BLOC1S1
TMEM167B
ATP2B1
ARHGAP28
ZNF236
ITGB3BP
EFCAB7
EBAG9
ADARB1
PXT1
KCTD20
GTF2I
CAPZA2
XRCC5
SLX4
PTAR1
PPM1A
NDUFV2
LTBP1
EFNA4
ETV4
RBPJ
SPATS2
DIPK2A
QRICH1
CHD1
RARG
IFNAR2
GFRA1
ANKRD26
LHFPL1
CEP162
MFSD1
CRTC1
COMMD3-BMI1
COMMD3
NKIRAS1
PPP2R3B
SSH1
IKBIP
APAF1
CREB5
HERC5
SRSF11
SF3B1
LRRC40
KLHL8
KLHL32
NAPEPLD
ACOT9
TMEM40
RRP1
PHC2
ASXL2
ZDHHC5
KDM2A
PACS2
BRF1
THEM4
MPP5
SCAMP4
HNRNPD
ADAT3
DRAM2
CEPT1
STX16
MATR3
DGKZ
RNF170
HOOK3
RNF187
PRKAB2
CHD1L
BCL2L13
POLA2
OPRD1
GPATCH8
ANP32E
ST8SIA1
RYR1
PPP1R15B
HNRNPA2B1
HES1
CBX3
FKBP1A
SNORC
SBK2
PTPN12
CNN3
CBLN1
PPP1R3D
FAM217B
ABLIM1
STRN4
NEDD4
FKRP
EPC2
DHRS13
CD47
ZSWIM5
MXI1
ZNF318
SRI
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMARCD2
ARSG
SSBP1
THOC1
NR3C2
TBC1D9
UBE2Q2
CCDC171
EYA1
SSTR5
SREK1
ZBTB12
DYRK2
CDC73
COX20
BTBD1
BCL2L1
FSCN1
BRD3
LLGL1
RNF44
SPTBN4
CD99L2
ANKRD12
TPBGL
ABHD2
CIC
ARMH3
MUSTN1
MAK16
SUGCT
STAG1
MPLKIP
BTG3
UBXN2B
PIK3AP1
TAFA5
TCF4
MIF4GD
LIMCH1
KLHL24
DISC1
UGT2B10
TLK1
KDSR
HOXC13
TPM1
PTMA
INTS12
GSTCD
FOXO3
SOCS2
LBR
GABRA2
PPP6R1
AKAP1
UTP23
KDM3A
BLCAP
NFIC
GMEB2
BTBD9
ZNF652
TBL2
SPATC1L
AIG1
TANC2
UGCG
C2CD5
ZNF185
NR1D2
PTPRD
INTS10
FANCC
FAM189A1
AMIGO1
ZZZ3
WDR87
SIPA1L3
MAST4
JPH3
CHRNA7
MEF2D
E2F6
VPS11
SYNGR1
TRIM62
TMEM145
FBXL16
FAM222B
RAB10
DNAJC5
AGTPBP1
TNNT2
BSN
UBE2D3
C16orf87
ZBTB8OS
USP6NL
RGS19
RBBP4
OPRL1
CUL5
SREBF1
CNKSR2
CCNI
BCAT1
PAFAH2
PDS5A
S100A2
ISX
HSF1
BOP1
ATP6V1C1
ADM
HECTD2
COPG2
GRK3
PRKAG2
HDAC9
MAPK3
PDGFA
ETNPPL
DUSP14
SLC25A12
ARL14EP
RAD23A
FBXO30
ARHGAP5
MEX3B
RNF144A
GALE
TMEM39B
POLR2M
TP53I13
SOX12
TBC1D1
CLK1
MCUR1
TOB1
SAXO2
PPP1R3E
NUDT10
MAX
HSPA2
FBXL17
EFL1
TBC1D19
DGKK
COMMD4
CDCA7L
ZNF821
MYLK4
TACC1
IFT43
ERCC1
UBL4A
NAV2
KLF13
TRIM55
DYNC2H1
ZNF609
GFUS
VEZT
FGD6
BDNF
PLEKHA5
HPS5
GTF2H1
MAP3K7CL
HK1
HDGFL2
ETAA1
NCAM1
ZFP1
UHRF1BP1
SLC25A22
NOVA2
GRN
DDX19B
AARS1
KDM4C
SLC25A34
IFRD1
ACSL4
SFXN4
TMEM201
RPS7
RASGRP3
OSGEP
APEX1
USPL1
TIGD2
MNAT1
HMGB1
ETS1
SNRPB2
SFMBT1
FKBPL
BCL7B
WASHC5
PRRT1
NSMCE2
CDK5
TOR1AIP1
N6AMT1
SNX10
KDM8
INTS13
FGFR1OP2
CITED2
C5orf24
ANKDD1A
AFDN
YPEL1
TXLNB
MAPK10
SUPT7L
SRCAP
SLC4A1AP
SH2D7
LOC730183
GNL2
TM7SF3
SCN3B
BMPR1A
KLHL12
KCNF1
ATP6V1H
FZD1
MEIS2
DENND5B
COP1
CHMP7
B3GALT5
ARRB2
AMPD3
STYXL2
PRKACB
KRT4
FOSB
DUSP28
ANKMY1
INSR
ANKRD1
ZNF32
USP30
PIP4P1
PAXIP1
TBPL1
SUGP2
CCNG2
ARMC6
ADI1
REV1
DPP9
PTK6
PIH1D2
NKAPD1
MRPL44
VGLL4
PBRM1
KIAA1549
KANSL1
GNL3
LRBA
KCTD7
VHL
EPS8
CLN5
SMAD2
PROSER1
NHLRC3
MTCL1
GCFC2
ARHGAP22
SAYSD1
MARCHF8
GSKIP
ATG2B
PUM1
OR51T1
TMEM100
KAT6A
ZCWPW1
MEPCE
RALB
RYBP
RPUSD4
FAM118B
CCNF
NR4A1
MTF2
CHD3
VDAC3
VTA1
PPM1E
NMBR
MTSS1
LAMC1
ZNF740
MAP4
DAGLB
CSAD
CDC34
MTNR1A
ARID1A
ZNF771
STS
PUDP
NME1
TXN
PEX3
AGO2
ADAT2
UGT2B28
INTS7
GTF2B
DTL
TMEM170B
TACR3
MPP1
CXXC5
RIN2
FSTL4
FAM240C
CD1A
SF1
JMY
C2orf49
ALDH3B2
TRIQK
CGGBP1
C3orf38
SYTL3
MYL5
INMT
ATP5ME
ZBTB46
SDHAF3
MYL12A
RNFT1
MYO6
USP31
MRPL53
G6PC3
CHMP2B
RPS6KA5