ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741423 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◣ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
MAMDC2
WDR74
CCDC107
CCIN
CDK12
RGPD2
RGPD1
MTRNR2L1
STOML2
UBE2F
PSMB6
SPHK2
RPL18
FAM83E
CCDC200
TRIM48
GTF2H4
TESK1
CLIC3
TBC1D4
RASAL2
ZNF335
MRPL45
MTRNR2L8
ZDHHC5
PLIN3
MTRNR2L2
MSH3
DHFR
RBM39
LPIN1
PAXBP1
RPL27
UBE2L3
CLPB
GTF3C3
UBFD1
EARS2
SLC44A1
CLTA
HLA-E
REXO4
ADAMTS13
SPAG8
HINT2
SLC39A11
SMG8
HRCT1
NEURL4
TRMT10A
MTTP
ADRM1
SLC9A1
SP2
SEC22B
TLN1
CREB3
BORCS7
COL23A1
PRMT1
PIGO
TRIM55
RUSC2
SH2B1
NOL11
DRG2
SIT1
FRG2C
RXRA
FBXO43
ARHGEF39
MSMP
EIF3E
RGP1
GBA2
ARHGEF1
SIRT5
GRK6
FRG2
DLAT
FKBPL
ATF6B
PDSS2
KIF2C
NUDT2
KIF24
DUX4
CDK5RAP1
EI24
RIN2
LOC730098
CCL27
TOMM7
ZNF638
PAFAH2
TFPT
PRPF31
ZBTB40
TGM2
FANCG
ZNF718
ZNF595
RNF216
AARS2
ZNF572
TMEM242
RASA2
GALT
SIGMAR1
STK10
AP2S1
GNE
SRXN1
TPM2
ZNF184
C8orf37
GBA
VPS37D
PTPRF
AHCY
OSCAR
NDUFA3
SNX16
KXD1
NR6A1
NLRX1
FXN
PIH1D1
ALDH16A1
UBE2V2
CYRIB
C19orf25
MTRNR2L9
ZMAT2
RNF24
NUCKS1
ZDHHC12
RFX1
MUC3A
SMU1
MED23
WDR43
SLC35E2A
TOR1A
FBXW5
C8G
ZDHHC24
ACTN3
NUDT9
MELK
MRFAP1L1
SMARCD2
GOLM2
TFB1M
YWHAG
NPAS4
MLLT1
SRRD
HPS4
RPS14
MVB12A
MEF2D
ENGASE
SLC29A3
CNN1
TJP3
SPATA2
ATG16L1
SETD1A
PRMT5
SGSM1
C1QTNF8
NDUFS7
SOGA1
PDCL
TAF1C
ADAD2
CTNNBL1
ZCCHC4
UTP25
PMEPA1
CLPP
TIA1
CDC25B
UBOX5
TEF
FASTKD5
UBE4A
LSP1
TRMT1
NACC1
CAVIN1
TKT
EPS15
DYM
XKR8
EPRS1
MRFAP1
COASY
HCAR3
PDE4A
HAS1
DPH5
ARNT
DNAJC19
LSM14B
ZNHIT6
SMCO4
TENT2
OSGIN1
ZCCHC14
TRIOBP
RAC1
PRPSAP1
GPCPD1
LUC7L2
TRIP4
TCF3
UNC93B1
ALDH3B1
PHKB
ITFG1
AKIRIN2
NCOA5
PLD1
CACTIN
STX16
KRT15
METTL14
MCC
PEX3
ADAT2
LGR6
CEP164
CCNC
MATR3
PRR30
PREB
FMC1-LUC7L2
FMC1
MT1M
MT1E
SLC25A16
SSBP1
MEGF9
UIMC1
ATF6
AP2A2
KDM3B
DNM2
NUP85
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRSF1
DMAP1
AKNA
EIF3C
SLC27A1
SPATC1L
ZBTB3
EED
RPL6
ZFAND1
SLC25A25
NAIF1
GADD45B
WDR59
PAK4
RBBP5
LTO1
FKTN
CCNT1
SLC30A6
CETP
LIMK1
FOXK2
CHST12
DAGLB
ADGRG1
CABLES2
PLEKHG2
MRPL35
IMMT
ICMT
LIME1
SARS2
MRPS12
HAX1
SLC35A4
APBB3
TERF2
DOT1L
CRLS1
HPS6
PPP5D1
CALM3
LFNG
CNOT11
ADNP
PRR5L
COMMD9
ATG4C
SCAMP4
MTRNR2L10
ATP5PD
ADAT3
SNU13
C9orf131
ZNF77
GSN
TCTN3
SEPTIN9
RPP25L
TRIM41
SLC35B1
LARP1
SLC38A10
CLUAP1
C16orf90
DIO1
PDCL3
ZNF131
RPS7
GSTA4
IL11RA
RBM4B
PSCA
NAE1
TACO1
CDK8
CWF19L2
NPR2
NUF2
TBC1D16
PPP1R13L
POLR1G
MEX3C
PTPN1
PTK2B
TEX46
KDM1A
EFR3A
RAB14
NEK6
KANSL3
FER1L5
EMILIN2
EIF3CL
PECAM1
RAB11B
LDLRAP1
ELP3
SLC31A1
FKBP15
PKD2L2
NUDCD3
TDRD7
ARHGAP39
MRPL44
MRPL38
PSMD4
RPL36
OLFML2A
AARSD1
YPEL3
TBX6
GORASP2
PDE6B
RMND1
MRPL54
ARMT1
APBA3
PDLIM7
MTOR
ADPRHL1
ATP13A3
PPP6C
TAC4
SLC26A8
MTF2
MAPK14
VPS13B
RUNX3
CASTOR1
TMEM161A
DPY19L4
ILF2
MLX
PCCB
SCGB1C2
SCGB1C1
CLK3
MEGF8
WASF2
SRPK1
STAT3
GABARAPL1
HUS1
TPK1
SPC24
GTF2H5
ZSCAN25
RIF1
DDX18
POLG2
PCBD2
MTBP
MRPL13
RAB4B
MIA
UBXN4
ZFAT
RNF213
MKNK2
SWSAP1
GLIPR1L2
CCDC22
CACNA1F
COMMD6
COPS4
DPP3
INTS12
GSTCD
TMEM41A
SPAG4
HPS1
TGFB1I1
NELFCD
PSMD9
HPD
PSMB3
PCGF2
LRRC37A3
GRK1
COMMD2
CIC
CIAO3
ZZEF1
GHITM
CYB5D2
LAPTM5
RAD52
UCHL3
KLHDC9
RPTN
RPL37
ST3GAL4
CBX4
SYMPK
FOXA3
DAAM1
PITPNA
KIF16B
DYNC2I1
TMEM79
SMG5
ALG10B
PANK3
ZC3H15
SF3A3
OR2T1
ENSA
ZNF555
TIGD1
MAD1L1
EIF4E2
ZNF234
TIMM10
TARS2
RNF187
ZNF606
SPATC1
GGCX
COX7A2
ADGRA2
SLC27A4
TRIM26
RAB5B
ATR
SORBS1
ZSCAN9
SYT11
GON4L
MRPL39
ICAM1
HIBCH
VPS37C
USP35
NCBP3
KCTD21
MANBAL
RAB2A
EMC4
MRI1
METRN
DOLPP1
ZNF551
PHC2
WDR70
ERCC6L2
AP3B1
ZBTB45
IQCE
POLR1H
NICN1
PGK1
TSEN54
CASKIN2
TIMM23B
PARG
IFNGR2
ERICH4
DMAC2
ZMYM1
TEX9
RFX7
UTP3
ISOC2
EIF5A2
ATP5MC3
ZBED9
SEC14L1
RCC1
FASN
SCFD1
BRAP
ACAD10
CARD14
MRPL12
LSM5
GADD45GIP1
AVL9
TBPL1
EMC8
COX4I1
LMO7
AURKAIP1
DCT
GK5
FAF1
ANXA2
H6PD
PPP6R1
SIRT4
SEMA4B
RECK
LTBR
MRPS14
ADAM19
TNS4
DHX15
C17orf64
TBC1D19
NDUFS5
DENR
RCN1
MYCBP2
KTN1
UBE2Q1
SEC13
GRPEL2
SYT7
RPS6
SUN1
VCP
ETFB
RPL38
ATP5MC1
RPL10A
RABGEF1
RAB5C
RPL37A
YTHDF2
KLF5
GABPB2
PDE4DIP
COX16
TYW1
SBDS
ELOVL6
ASXL1
TRAPPC3
TIMM9
ST6GALNAC4
KIAA0586
FBXO46
INO80C
STRA6
SLC35E2B
TMEM214
AMZ2
KDSR
DSTYK
RNF114
ADA
RS1
PPEF1
MTMR14
TMEM18
ABRAXAS2
FPR1
LEO1
EIF3D
PKD1L2
SNRPC
PLEKHM3
LOC112267881
CYB5R4
TTC38
PKDREJ
CHMP6
GPSM2
BEGAIN
COX5A
GALNT10
MT1F
MT1B
EGR1
HMGN4
ASF1B
TRMT2A
TGDS
RANBP1
IER3
GTF2H2
FLOT1
CDKN1A
NFE2L2
LACTBL1
DGKZ
DHX16
MDGA1
HIBADH
RIOX1
PRRG2
NOSIP
SDAD1
TOR1AIP2
TOR1AIP1
IL1RAP
FAM168B
SLC25A20
MTERF1
FAM8A1
MICALL2
VKORC1
CTR9
ARHGAP24
STXBP3
FAM200B
SMARCC2
PLXDC1
MFSD4B
PGLS
AKT2
PRR5-ARHGAP8
PRR5
TSACC
CCT3
ELFN2
BCL9
NEMF
ZNF687
TSC1
OPRL1
GFI1B
CFDP1
TMEM51
LPAR2
RBM12
FBXL19
CPNE1
EIF2D
MPRIP
ELAVL3
PMM1
EIF4A2
ERCC1
ECSIT
RPN1
LPP
SYNGR2
RBM45
PDE11A
TOM1L2
DRC3
GEMIN6
DPY19L1
SHFL
RNASE4
PRELID2
NOTCH2
ANG
TMCO6
CHRNA9
CD14
SSBP2
PKP3
MCM7
INKA2
DEF8
DDX20
AP4M1
SNX8
NIPA2
ZER1
LZTS3
PISD
MACC1
ARL14EP
BRIX1
ZBTB43
SPOCD1
PTPN3
POLR3E
H4C6
GAMT
SCML1
NME1
CIZ1
MRPL58
RBM12B
NDUFAB1
MARCHF7
CYLD
PTPRA
HEXB
TRIM32
ASTN2
LAMP3
KDM3A
WIPI2
OPA3
PTPN4
TRAF6
RPL13
RAG1
EIF3F
CDA
SLC12A9
NLRP1
KLHL20
EPHB4
SLC25A44
DRAM2
CEPT1
CCDC117
YEATS2
UQCR11
MTR
MRGBP
C16orf70
PRUNE1
MINDY1
PRKCA
PRDX1
TIMM23
TCIRG1
ZKSCAN8
RPS29
PRKAB2
PPIL3
NIF3L1
CHD1L
USP45
TSTD3
XKR7
AGBL3
CLCF1
OSTF1
OPA1
NMRK1
FAM133B
EHF
EEF1AKMT1
CERCAM
BNIP1
MRPS15
ANGPT1
ZSWIM3
SP1
PREX1
ACOT8
S1PR4
MARS1
ARHGAP9
TTC21B
RPL24
ZNF500
EIF5A
SYNJ2
POU2F2
PHF19
MAD2L1BP
NEDD1
INTS5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIM59
TDP2
ACOT13
ZNF554
VTA1
NMBR
GPR160
CDC5L
C1orf198
NKIRAS2
DNAJC7
CARD19
EHD2
CTSZ
REXO5
PIP5KL1
ERI2
AP1G1
TSSC4
RCAN1
CRTAP
CASC3
ID1
WDR7
SMIM17
MED18
CTDSP1
BDH1
TRIM45
LIN28A
LRRC59
TRAF3IP3
ANKRD46
ZMPSTE24
DCP1A
CIBAR2
RRP15
LMTK3
CCDC77
ZNF582
PSMF1
OSBP
ZNF408
ARHGAP1
AHSG
ARTN
SH2D5
MRPL3
MAP3K10
TATDN1
OMA1
NUTM1
NOP10
NDUFB9
DAB1
CDK9
ACOT9
IRGC
ITGB3BP
EFCAB7
ATAD2
ASB6
MAP2K6
EVI5L
BCAR1
NCOA7
GNG7
FCMR
MDFIC
PGBD2
IER5
HM13
C6orf226
SHROOM2
SARDH
KCTD18
FOSL2
NUDT8
MTIF2
ROBO3
NDUFC2-KCTD14
NDUFC2
NBN
ODF3L2
CTPS1
ZFP36L1
MRPL30
MITD1
TMCC1
NIPA1
DST
DNAJC25-GNG10
DNAJC25
C8orf76
BEND6
ALKBH3
EIF1AD
CSDC2
BANF1
WNT7B
KAAG1
IQSEC3
DCDC2
CRYAA
CRYAA2
IFT46
RAG2
IFTAP
ZFAND4
ZCCHC3
VAT1
RND2
GALNT11
USP42
TRIM7
MRPS33
H4C3
H1-6
SNRPE
RABGGTA
MTHFSD
E2F6
SBK3
ATXN7L2
PFAS
CTC1
C4orf48
BANP
PNPLA6
IP6K3
DPEP1
ARFGEF2
ANKRD13C
COL6A1
AMOTL1
ADAP1
NEMP2
MOSPD3
GTF3C5
RPS20
QKI
COL18A1
PFDN2
NIT1
INTS2
TFAM
STX18
PLEKHG4
C1QTNF1
POLG
FUT10
ABT1
SNUPN
HEATR6
RGCC
PRCD
FLVCR1
CYGB
ANAPC11
PARP2
HES7
DNAI1
ALOXE3
MRPL48
ARSD
ATG9B
ABCB8
ADAR
SMIM8
SH3GLB2
EPOP
TBL3
SNTB2
SLC66A3
RNF151
RHOD
COQ3
RPAP1
GNA12
SAAL1
MYO1C
MFAP2
MAP11
CD36
TMEM107
TAF5
TGM3
SEC62
FAM220A
TPP2
PRRT3
FRA10AC1
KIF3B
BORCS6