ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188690 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◣ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

FAM222B
SPRTN
EXOC8
RAB35
SMARCA4
CCDC12
ANKRD26
FAM220A
SDHA
CCDC127
N6AMT1
XRCC5
SAMHD1
APOLD1
DAGLB
DNAJA3
PAGR1
RAD21
ENTPD6
C10orf88
WIPI2
ZC3H8
SUGP2
ARMC6
SAYSD1
POU2F1
CXorf38
ACTN4
ZNF12
ZBTB17
TUBD1
RPS6KB1
KHDRBS1
SLC2A11
TOLLIP
FAM98A
CRTC1
NELFCD
STK32C
LRRC27
VPS26B
NCAPD3
MYPOP
MCRS1
PHF12
EHMT1
ABCF3
PREB
CENPBD1
PITPNB
EID2B
NDEL1
PDRG1
SMIM11B
SMIM11A
POLA2
NBPF1
LOC100287896
LIPT2
BNIP3
SRSF10
PPP6R1
SLX4
CKLF-CMTM1
CKLF
MTCH2
HNRNPL
NAGK
PPP1CB
MIS18A
FAM122A
SELENOI
ADGRF3
PATL1
ALKBH5
GTF3A
TMEM143
SYNGR4
RPP38
SMIM14
ADI1
FAM24B
OARD1
NFYA
THAP7
LONP1
CATSPERD
XPO5
POLH
CDC7
HINT1
DDRGK1
PTK2
RABIF
FAM71E1
EMC10
RANBP3
NPRL3
CBX5
HNRNPA1
FUT8
SUMF2
DPF2
ZNF583
ZNF576
IRGQ
CCNQ
THAP5
DNAJB9
VDAC3
HNRNPH1
RTL10
GNB1L
SARS1
TMEM250
SPOP
RAB18
AMZ2
ABCA3
PRMT2
SMG9
TMEM141
NUP50
RCBTB2
SRD5A1
NSUN2
MOK
CHD1
ATP6V0E2
NAPG
GDF5
CEP250
LOC100289561
GMCL1
TMX1
FAM120B
TMED4
PPME1
C2CD3
USP10
SPPL2B
LSM7
RBAK-RBAKDN
RBAK
NBPF3
BANP
NOB1
FADD
YEATS4
UNG
HP1BP3
RALGAPB
ZNF638
PFKFB4
MTHFSD
WDR13
COP1
C6orf136
TMEM63B
MRPL14
CHMP7
KDM8
TRIM37
MRPL45
NAPB
XPO7
TMEM104
NAT9
RBM17
ESRRA
CISD1
IPMK
DLGAP4
SYS1
PPP2CA
USP21
RNF149
GRB2
ZMYM4
PIAS4
SOD2
ACAT2
HSF1
BOP1
POLR2J2
CDC34
LUC7L2
FMC1-LUC7L2
FMC1
MAN1B1
ZNF652
ZNF664-RFLNA
ZNF664
CCDC92
PRPF39
STX1A
PIGF
CRIPT
WWP1
INTS13
FGFR1OP2
SRRM1
MAP2K7
PDXDC1
CCT5
ATPSCKMT
ARFGAP3
VPS13A
DYRK1B
PAPSS1
SAFB
SAFB2
EPS15L1
AP3B1
CCDC93
CLIP4
MRPL54
RPL36
APBA3
MRS2
CASP2
ENDOV
CCSER2
GZF1
CDC42EP4
PRELID3B
OPA1
ZBTB14
SPECC1L
SH3YL1
ACP1
TIGD6
HMGXB3
INTS7
DTL
SRSF1
PARP6
FAM227A
CBY1
SHBG
FXR2
MAPKAP1
TDP2
ACOT13
DLD
CAPZA2
TMEM43
CHCHD4
SNAP47
JMJD4
SMIM27
MLH3
OSCAR
NDUFA3
PUM2
FBRS
FBXO31
MAP1LC3B
AMACR
USO1
TIA1
GATD3B
GATD3A
EID1
WRNIP1
PVR
C1orf74
ABHD10
RAB1A
TAX1BP3
EMC6
SEH1L
PTPN4
DHDDS
DCAF8
PCGF1
THAP12
GVQW3
CACYBP
UPF2
C15orf40
BLOC1S4
MSL2
CC2D1A
C19orf57
METTL22
SCAF11
ESCO1
TMEM70
TRMO
LAGE3
IQCC
DSN1
TMEM120B
ERCC6
ERGIC3
PTBP1
TMED3
C11orf80
MORF4L1
RSL1D1
NUDCD2
HMMR
NFXL1
ALG8
PGRMC2
RRP1
SPEN
C8orf48
DYNC2I1
GAA
DHX9
KIF6
CBLL1
WDR4
MINK1
HBS1L
CPLANE2
TSEN2
PALB2
DCTN5
RPL8
LINS1
ASB7
HEXIM1
COX6A1
FIP1L1
NDUFA8
MORN5
NDUFA6
CYRIB
XRCC2
MKNK2
EIF2S1
ATP6V1D
ATOH7
C2orf74
CAPN7
TASOR2
ZHX3
THOC3
NANP
GFPT1
AP1G2
VPS13C
UTP18
MBTD1
POM121
CENPS-CORT
CENPS
CIPC
ARPC2
ANO10
ABHD5
PKD2L2
WDR43
SPDL1
TMEM109
CABIN1
UROS
BCCIP
CCNI
ROPN1L
UPF1
PCIF1
GPAA1
NUP107
MOCS2
RAD23B
MRPL24
PPA1
KCTD13
ADAM10
SNRK
SREBF1
TMED9
BSN
C15orf61
TBK1
PDCL3
CRB1
TTC37
ARSK
DST
GPBP1L1
CYTH1
TMEM69
HASPIN
DFFB
CEP104
TMEM63A
FZR1
LRPAP1
TBC1D5
PTPN2
PHF23
ZMYM1
AGFG2
ASNSD1
ASDURF
MRNIP
ZC3H14
RNF130
CLASP1
XRCC1
PINLYP
UBE2V1
ZDHHC12
MTG1
NR1D1
ZNF182
SPACA5
MRTFB
MSRA
SPATS2
SMARCC1
APC
POLR2J
PINK1
SLC30A5
PGP
DISP2
CNOT4
HERC4
RPRD2
PARD6A
ACD
POLRMT
MAST2
TIGD5
EEF1D
PARK7
CEP20
PLA2G12A
TIGD1
EIF4E2
POFUT2
KIFAP3
IFNAR1
ALAS1
TRNAU1AP
PPP5C
EIF2AK1
CBX6
SRPRB
RFX1
CC2D1B
FAM200B
GPATCH8
ARRDC3
FITM2
SOS1
DHX34
TMBIM6
PCSK1N
RPS29
MRPS18C
HELQ
TRMT61B
NUP62
IL4I1
ATF5
ARHGAP35
SNRNP70
ASCC1
ANAPC16
ELP6
IMMT
PARD6B
SLC39A10
CANT1
NRF1
SPC24
TSPAN10
NPLOC4
RNF19B
AUH
GOLGA1
AIP
DTX2
P3H1
TBC1D7-LOC100130357
TBC1D7
ZC2HC1C
ACYP1
SMAP2
CCDC30
ZMYND12
PPCS
DUSP18
SLC39A7
RXRB
DCTN6
RNF38
DNAJC5
PLEKHA8
SGTA
MEGF8
RBM7
C11orf71
ING2
U2AF2
CLPTM1L
SEC22C
SS18L2
B9D1
EIF4G1
NSMCE3
AKAP1
PRDM4
STX2
VARS2
ZNF248
MPHOSPH6
RDM1
FLYWCH2
PTCD3
POLR1A
CCS
CCDC87
INTS2
PCBP1
UQCR11
ZNF251
ZFP69B
ATP5PO
TRIT1
SPG7
ZNHIT1
PLOD3
TENT4A
MCRIP1
SPDYE14
SPDYE10P
CYCS
NPM1
CBX7
TBC1D25
CFDP1
SPRYD7
UGGT2
FBXO48
APLF
GNPDA2
PITHD1
DNAJC28
GABRB1
ATP5MC2
HEATR5B
GPATCH11
EIF2S2
RNF216
LRBA
BTF3
BIRC6
ZNF526
TERF2IP
KARS1
MTFMT
KIF22
HINFP
SCML1
PPM1D
MARS2
SEC16A
C9orf163
FAM234B
PAM16
EIF2D
SIRT5
KIF3A
POP7
CTPS1
CEP295
MTHFD1
SPAST
ZNF747
TRMT11
ATXN7L2
PAIP2
USP28
ZNF217
MBD1
DNA2
KATNIP
GTF3C1
RPP14
HTD2
OSER1
WDR5B
CHMP2A
ARF4
PPAT
PAICS
TFG
FNBP4
SVBP
ERMAP
SLC35A4
APBB3
PTTG1IP
TCF25
TFDP1
FLYWCH1
ZNF473
VRK3
ASXL2
CCNJL
GOPC
OTULIN
TPX2
ZNF471
SBNO1
TMEM170B
CHMP3
ATP6V1C1
PHC3
ZNF428
CSNK1A1
POLR2J3
LYPLA1
KDM2A
CTBP1
ZBTB4
POLR2A
TSSC4
WDR18
NF1
SRRT
TBCCD1
CDT1
AARSD1
URGCP
UBE2D4
NAA50
ATP6V1A
UIMC1
FBXO46
BRD2
SDCBP
PGAM1
EIF5A
ARMC2
CHORDC1
RFXANK
BORCS8-MEF2B
BORCS8
SYMPK
FOXA3
SPATA4
PCNX3
CCDC150
CDC42
PUSL1
ACAP3
PDIA5
TRAPPC9
STX12
VPS28
PCLO
SLC35B3
STARD10
RABGGTA
MYL5
ATP5ME
S100A13
CHTOP
ING1
INO80C
OCIAD1
SEC14L1
UBN2
CFAP410
BLOC1S2
PIGX
CEP19
TBC1D32
EED
NADK
ZNF692
ZDHHC16
EXOSC1
CASK
PAPOLA
POLR3H
ZNF713
PDCD2L
FAM104A
C17orf80
SCAND1
SELENOT
CD320
MEAF6
MYCBP2
NDUFS6
KIAA1109
SAP30
TRAM1L1
GTPBP8
UQCC1
FAM219B
ZFAND3
RIOK2
CENPI
TOMM20
TCTA
RHOA
IPP
AKTIP
CASTOR2
LRRC42
TMEM170A
SEC61G
ZFAND2A
KLHL22
TMX3
CCDC102B
PPP2R3B
SEC24D
SHC2
TAOK2
E2F6
SSH1
SESN1
CEP57L1
TSACC
CCT3
MTCL1
BCL10
C1orf53
SNURF
SNRPN
PIGH
GNPTAB
TRAM1
SLC37A4
EIF3K
MAP4K1
C14orf28
EXOSC5
BCKDHA
VASH1
LIG4
TRIM46
KRTCAP2
ZC3H15
PLK4
TAF1B
GFOD2
MPP6
GPR137
RTN3
BAD
ZNF787
HOXC4
HOXC6
SCAPER
GDPD1
SDF4
B3GALT6
LPCAT1
TOR1AIP1
COX18
GTPBP10
FBXO42
DAZAP1
ZNF285
TCTEX1D2
IPO9
PSMA2
ASB8
OTUD5
MED4
HSP90AA1
PDCD6IP
PLPPR1
CFAP206
UFSP1
MACROD2
IQCE
MYCBP
DAD1
EXOSC10
ZNF667
MAGI1
ANGEL2
PRR29
SMIM4
MS4A13
ANAPC11
ALYREF
SNX8
TRMT2A
RANBP1
CHKB
SAMD5
STS
PUDP
TRIM28
CIAO3
SDHAF3
PAFAH1B1
MBD6
YIPF2
TIMM29
DPYSL2
USF2
ZSCAN32
ZNF174
TPRA1
EXOSC2
CBFB
SUPT4H1
RBM14-RBM4
RBM14
MRPL17
FAM133B
FXN
TRIM23
TRAPPC13
SHLD3
BORCS7
STARD6
C18orf54
SMARCB1
SIX5
TIMM13
ABRAXAS1
SIN3B
FKBP1A
PHF14
SRPK1
C8orf37
NFX1
RAB8A
SLC30A4
MBD3
EIF1
SPATA1
GNG5
SLC35D1
TSPYL5
ROCK1
MMAA
SCO2
N4BP1
ZBTB2
COQ3
PPP6C
COMMD8
RTL8A
DNMT1
DENND2B
PIP5K1A
AKIP1
ARPC1A
RNF8
ZNF554
SRR
SMG6
SLTM
ELOF1
TTLL12
SINHCAF
PCMTD2
ZFR
PDCD5
MAP2K2
OSTF1
NMRK1
MIEF1
TOMM34
TMEM116
ERP29
NAA40
AP1M1
TOP1
POMGNT2
EID2
LOC100421372
HSPA14
CDNF
CNOT1
KDM3A
POLG2
SPTBN4
LSM4
ZNF74
CASZ1
SUCLA2
SNAP23
TFB2M
CNST
WDR45
WWOX
COG6
MEPCE
ZCWPW1
AKAP8
RAB23
RAD23A
CNNM3
MYO9B
HAUS8
SPPL3
CLN5
MXD3
SLC41A2
ATP6V1G1
RBBP8
TMEM175
GAK
UBE4B
GABPB1
CSE1L
EXT2
LPCAT3
PMS1
ORMDL1
SENP8
MYO9A
ILKAP
TAOK1
DHRS7B
KMT2E
IPO11
IMMP2L
ELOVL4
TGDS
ZNF281
TSGA10
C2orf15
SLC49A4
HSPBAP1
CCDC130
EEF1A1
RAB4A
INSIG2
CSDE1
C17orf97
LRWD1
ALKBH4
STARD7
EZH1
SIRT6
ANKRD24
DDIT3
TMEM182
URI1
FGF12
AVEN
CDC5L
TMEM127
CIAO1
SYP
ARHGAP28
MROH1
LSM12
DKC1
HDLBP
SEPTIN2
SRSF11
HM13
SEPSECS
UQCRC1
CARNMT1
MRPS25
POLR3B
TRAPPC5
THOP1
TMEM254
FUT11
VSTM2B
TRPM7
POM121C
ZNF800
OAZ2
TSPAN7
FBXO5
TRIM39
AP2M1
ARMC5
TMEM38A
SMIM7
ACTR8
TRO
C5orf24
DCT
ARF1
TMX4
ERLIN1
DOLPP1
TDRD7
ZNF331
PLEKHB2
SMAD4
ZBTB43
UNK
ARAF
MPC2