ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPS derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
MAMDC2
FRG2
CCDC200
DUX4
ARL4D
NOC4L
DDX51
ZNF436
ZNF285
ZSCAN32
ZNF174
SNX11
CBX1
KLF4
B4GALNT4
TMEM242
BCAR3
SMCO1
POU5F1
SPATA13
PXDN
RHOT1
KLF14
JMJD1C
REEP3
DYNLL2
EDF1
SNX16
SRSF5
MUC3A
TMEM216
HACD2
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
TM9SF2
NKX1-1
SOX2
ATP6V0A1
ATP9B
DIP2B
ELOVL2
COL23A1
PRDX6
TCF19
CCHCR1
C3orf14
MAP3K4
SELENBP1
PI4K2B
C2orf69
C1GALT1C1L
FAM184A
GTDC1
AKR7A3
POU5F1B
RAB37
FANK1
TSPAN5
CCDC130
CYB5R4
CLIC3
MAD1L1
SLC30A7
EXTL2
ATF7IP2
DHX40
TBC1D22A
VN1R4
MAIP1
RPL26L1
PER3
ZNF550
SPATA2
PLXDC2
FEM1C
TMEM43
CHCHD4
PDE4DIP
ZNF627
EDNRA
POTEH
KCNJ15
ITGB3BP
EFCAB7
SLC28A2
CHMP6
UBE3A
ZFP30
RPS14
ATP1A1
NT5C3A
MTF2
CPT2
PLA2G4E
SIVA1
SPDYA
ZNF555
TMEM44
SCGB1C2
SCGB1C1
ODF3
FAM227B
DTWD1
NBPF1
ZNF487
MTRNR2L1
TLR2
WDR33
MRLN
FRMPD4
ZNF229
ZSCAN31
ZNF300
MORC1
SMAD1
ANK1
ST3GAL5
SLC17A5
USP30
RNF187
PEX3
ADAT2
RTTN
GK5
ENOSF1
DHRS7
PAQR9
HNRNPL
ZNF792
BRWD1
NUF2
HLA-DRB1
RSU1
PNPLA7
MRPL41
ARHGEF4
HMGB1
USPL1
TMX4
ZDHHC18
NEMF
PDCD7
TTLL12
TSACC
AVPR1A
SAMD4B
GMFG
RANGAP1
TRAF6
RAG1
CD47
ZC3H7B
EP300
COLEC11
TFPI
SOX30
DRD4
C5orf52
RPLP1
SPATC1L
ZNF24
ART1
GTF2A1L
C2orf88
SPATA6
RNF212B
TRDMT1
SLC11A2
SDCBP
INPP5F
MRPL22
GEMIN5
GTPBP4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
CHAF1B
ZKSCAN2
ANKRD18B
SLC39A6
ELP2
SMYD3
HS2ST1
SELENOF
TBC1D2
ANP32D
CNOT6
NAXD
TMEM239
C20orf141
DCP1A
PTGES2
AGBL3
XKR6
POLR2J3
CBWD5
CBWD3
EIF3L
ANKRD54
URI1
CLGN
ZCCHC7
GMDS
VBP1
STX16
EIF2S2
GAGE2A
ADAMTS20
ZNF594
ZNF614
DUSP16
MIS18BP1
BRSK2
EPB41L2
RPAP2
GLMN
CNTLN
KBTBD7
DNAJC25-GNG10
DNAJC25
HECW2
ANO5
CAT
FKBP9
LBR
PAAF1
SULT1B1
METTL8
C19orf18
CLPP
SLC44A1
OR8B3
HECTD1
GAGE12I
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
GAGE2B
ITPR2
CNIH4
IQGAP2
EDEM2
SEMA3D
RAD54L2
EIF5A2
BTBD10
NEIL3
STX18
UGT1A10
SPATA22
ASPA
MRPL40
HIRA
LRP6
PRELID3B
NEK7
YTHDF3
PCDHB5
MTRNR2L8
LRIG2
SLC9C1
SLC10A7
ZSWIM9
LIG1
ZNF562
BTBD8
NUP54
ARHGEF12
PLCL2
ZNF416
ZIK1
DNM3
KAT6B
TMEM41A
RIPPLY3
CRH
CTNNB1
PRPF40A
ARL6IP6
LHX9
C1orf53
PI16
ILRUN
GLRB
YPEL3
TBX6
FAM153B
SNX3
PJA2
TASOR
C3orf80
KCTD3
NLGN4X
MAP3K19
PGBD2
KCNF1
BTG1
ZNF584
RNF225
TYW3
CRYZ
GPR150
TMEM98
CNTRL
C5
RNF38
ARMCX1
FGL2
MAP3K2
NOTCH2
ZMYM5
TAS2R4
KANSL1
RIMS2
PPP2R2B
ZC3H12C
PCDH17
RFC1
PARP16
YBEY
MCM3AP
TMEM229A
MST1L
ZNF572
ARHGAP45
DEK
ATE1
ADAM22
MARCHF7
ZNF613
MTERF1
TULP4
RANBP2
PTPN12
DNAH6
USP35
KCTD21
RPS29
RUNDC1
PTGES3L-AARSD1
PTGES3L
MED4
RPL30
ELF1
WBP4
CTSC
RFK
GRID2
MID2
KIF2C
NSFL1C
SH3BP5L
ZNF672
GDAP1
FH
CTXN2
DDX60L
MYEF2
COX6A1
UBE2D3
CISD2
CREBL2
RPL11
POLE4
LIMS1
SLC25A12
RTN3
ATL3
UGT2B10
PPP1R36
HSPA2
DPY19L4
MTERF4
SPAG5
RSKR
PSMG1
PPP1R9A
KLHL7
HACD3
TNFRSF11B
COLEC10
ZNF623
TRMT5
SLC38A6
NDUFV1
MRPS31
SNIP1
DNALI1
SNRPB
C18orf21
TARS3
EPS8
XKR4
KRBA1
BABAM1
IQCF2
SYTL4
CLTC
ARHGAP32
RNF130
OTOP1
POTEB
POTEB3
FGD3
CDYL
SELENOT
HDAC1
SAMD13
UGGT2
AURKB
SNRNP48
ARHGAP39
MS4A1
HYAL1
NAA80
HYAL3
ZNF518A
KBTBD3
AASDHPPT
UTS2B
CCDC50
IQUB
DEPDC1
MFSD14A
LRRC8C
OPRK1
ACBD6
MRPL48
LGR5
SMAD5
FIGNL1
SVOPL
MRPS5
MTHFS
CARS2
ING1
NUDT15
DSTYK
RMDN2
VAMP1
TMA16
CCNI
ZSCAN18
SLC16A2
FBXO34
TBC1D3J
SV2A
BOLA1
TBC1D3L
TBC1D3F
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
KCNN2
CTAG1B
CTAG1A
MRPL21
IGHMBP2
SMIM13
HLCS
NAPG
DIO2
ZC3HAV1
PCDHGB7
PCDHGA10
WNT2B
PCDHGA11
KAAG1
DCDC2
C15orf61
ARNT
CERS6
ZWINT
ACYP2
DLAT
RUVBL1
OR56A5
SLC25A18
SLC25A53
FAM199X
EEFSEC
CEP192
OR8J3
PEX2
COG6
ZSWIM5
SF3A3
SCAF11
CLK4
EPM2A
TDG
C12orf73
PRKD3
MICU3
WDR74
STX5
CHST3
UBE4B
RNF6
ZNF791
ZNF490
CRTAP
CYB5R1
ADIPOR1
RAD23B
P2RY1
SORCS1
MDM4
NCEH1
MRAP2
GADD45A
EIF3D
SSH2
ACAT1
LRATD2
DKK1
CLOCK
AKR1E2
TTC30B
TTC32
ZNF280D
ZNF286A
STBD1
CPD
RRAS2
PPP2CA
MOS
FAM98B
CPPED1
CCN6
SHOX2
RSRC1
MRPS30
TTLL7
TATDN3
NSL1
PIK3R1
LRTM2
ALKBH3
PCBP3
MRPL42
APOLD1
THAP9
SEC31A
DR1
TYW1B
EIF4G2
STK17A
FTCD-AS1
ATG10
VPS37A
CNOT7
FTCD
PCDHA6
PCDHA5
PRDX3
NFE2L2
EEF1AKMT2
PPP5D1
CALM3
BCKDHB
RPS6
PARP4
SLC35B4
C16orf89
ALG1
INTU
E2F7
ENAH
ALPL
IER3IP1
COG2
TIGD6
HMGXB3
VAMP4
SH3RF2
MBD4
IFT122
STX17
ANGEL2
RWDD2B
SLC27A2
SLC39A8
DTD2
FHAD1
HSPA1B
TMOD3
P4HA1
ZNF606
PCDHA3
PCDHA4
BPIFB3
MED23
LHFPL4
GTF2H2
PDCD6IP
FAM120B
NSMAF
RNF125
MTLN
WDFY1
PRAMEF17
RPL6
PTPN11
VPS26C
THOC3
PIK3CA
NPHP1
L3HYPDH
JKAMP
ZC3H15
HEATR5B
GPATCH11
SGIP1
ARFGEF1
JRKL
CCDC82
SVIP
HPS3
TMEM191B
PCDHGC4
FLACC1
PCDHGC3
RIOX1
GGTLC3
ZDBF2
NARF
CYBC1
REXO4
ADAMTS13
ZNF829
ZNF568
STAT1
ZNF25
NDUFA6
CCDC71L
COPS8
ARL4A
BTG3
SH3GLB1
HACE1
BTF3
AKNA
GNAI1
TRIM27
LBP
MYLK
SEC22B
C5orf60
KANSL3
FER1L5
VPS11
HYOU1
ZSCAN25
NOL12
G3BP2
SMARCAL1
SUCLG2
GPR155
CDC42SE2
ZKSCAN7
INTS12
GSTCD
ZNF391
DRG2
NEU1
SRSF7
MTIF2
GFM2
TOMM20L
SIAE
PXK
CALM2
HDAC9
SPATA7
LRRC7
GPD2
LIN7C
C4orf36
HSF2
POU2F1
TBC1D5
ABL2
YTHDC2
KAT5
SCGB2A2
RNASEH2C
CLN5
SLC36A1
DEPTOR
SOX4
BSDC1
NCKAP1L
B4GALNT3
METTL25
CCDC59
STXBP5L
SENP1
PFKM
FZD1
PDS5B
UBQLN1
PPP1R12A
SMIM10L1
PRH1-TAS2R14
PRH1
SEC61A2
MPP5
NAP1L1
GPR88
CHST14
ZNF324B
ZNF132
C2orf66
COMMD2
RBBP9
GTF3C3
AUH
UBE2Q1
CHRNB2
METTL16
COX18
ZNF544
KIF1A
TBC1D31
PHF3
HERC4
FSD1L
SRSF12
SETD5
NID2
ZNF443
TMX2
MED19
TMEM106C
UBN2
GINS1
ZNF429
HILPDA
TLNRD1
GGA1
RBM15B
MANF
GAL3ST4
NT5E
RPN2
MROH8
STAG3
GPC2
AKAP9
SLC46A3
LRRC75A
WDR72
ACP6
ZER1
TBC1D13
RPL32
ZNF486
OPRL1
RGS19
LKAAEAR1
SLC35A3
U2AF1L5
U2AF1
RPL5
NPIPA3
NPIPA2
HMOX2
CRNKL1
CFAP61
NMRAL1
MRPL17
ZNF485
SYT1
NEK9
FBXL5
PCM1
ZNF354C
ORC2
DNAH14
ZNF518B
SLAIN2
P3H1
TRERF1
DIPK2A
DPF2
DAPL1
ELAC1
POLD1
HTR5A
TMEM202
LRPAP1
PTPDC1
MTMR9
MPHOSPH10
MCEE
SPRYD7
SS18
SMAP1
WDR12
CARF
LOC102724770
DGCR6
PNMA3
ZNF30
SDR42E1
SMIM12
CADM2
MTR
MRPL44
ATR
EXOC2
KLHL20
MTBP
MRPL13
CBWD6
MAPK1IP1L
GOT2
TTC37
ARSK
POLR3D
FNBP1L
CCDC138
CHSY3
NELFCD
HECTD2
HADH
CRHBP
ISCA1
RCBTB2
CFAP206
CHMP2B
SLC25A27
CYP39A1
ADGRG6
TACSTD2
FN1
ZNF32
C9orf64
KLHL41
DUS1L
METTL9
GOLGA7B
RCBTB1
FAM172A
ADAR
DCP1B
PCNA
TMEM230
ZC3H6
MAGEF1
KBTBD6
DNAH7
CDS2
LUC7L3
FANCA
GRIA4
PUS3
DDX25
RPL39L
SRPRB
ZNF341
FKBP11
VPS37C
CD14
TGFBR2
RHEX
BTBD1
ZNF135
C6orf89
PPIL1
PKD2L2
PPP1R8
ANO10
HERC3
PYURF
PIGY
ABHD5
NCAM1
RPGRIP1L
FTO
NTSR2
LPIN1
MUC21
CENPV
SPRN
PSMA1
ZNF26
NANOGP8
CEP78
LRRD1
ATP6V1C1
MSRB2
PDE3B
TJP2
LGALSL
PCDHA12
PCDHA11
PCDHB4
PCDHA13
THUMPD1
GNAL
ZNF329
MRPL58
INTS9
HMBOX1
ANKRD36
UGT8
FAN1
CTHRC1
GPR37
ATP7B
ALG11
MTHFD2
RHBDD1
IMPACT
NRG3
SMC3
MYBL1
RNF32
TMEM185B
PSMD8
KMT2A
IFIT1
RAD54L
MARS2
MRPL39
SLC25A28
SLC25A32
DCAF13
EFCAB13
ANTXR2
ZFYVE9
BTRC
GMFB
SYS1
NASP
FZD7
NUP58
TRIL
B3GALNT1
PRSS38
ZNF662
ALDH3A2
OR1E3
B4GALT7
TMED9
RPS3A
MEMO1
ENHO
ANKRD36C
UBE2V2
MRGPRX3
HSPA1L
HSPA1A
BBS5
RDH14
LSM2
CEP63
ANAPC13
GTF2E2
GINM1
STRN3
AP4S1
PCDHA7
ZFP2
GCH1
EIF2D
FAF1
ERV3-1-ZNF117
ERV3-1
ZNF512B
AMZ2
AGK
ZNF454
CBR3
CCDC90B
NOC3L
INO80D
IL17RD
FAM185A
PAG1
SLC38A1
CCDC112
MINDY2
EIF3A
PCYOX1L
KLHL14