ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186700 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX116458: hESC H1

◢ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◣ SRX186700: K-562

◢ HDAC6: STRING

WDR74
PMF1-BGLAP
PMF1
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MTRNR2L10
RGPD2
RGPD1
MTRNR2L8
MTRNR2L1
MAMDC2
EPN1
UNC45B
EMILIN2
MUC3A
TRIM48
MTRNR2L6
COL23A1
CDH11
ACBD6
CRYAA2
CRYAA
LGR6
CCDC200
OPRL1
LKAAEAR1
MICAL3
DYSF
FRG2
PAX4
SPAAR
TUBA1A
NCOA7
FIBCD1
MEIS1
C3
FRG2C
ARRDC2
OR2T1
CASZ1
SPATC1L
GJD3
SESN1
SRSF2
MFSD11
NUP214
H2BC12
H2AC12
POLDIP3
HRK
H4C14
H4C15
PHF19
PHACTR2
SHH
H4C2
H3C2
H2AC4
ESYT2
POLR3E
FOXD4L1
DUX4
H4C11
TTI2
OXCT2
FUS
ANGPTL4
HSP90AB1
ITPR3
GFOD1
HSPA1B
KIF26B
FCMR
CHST11
CAVIN2
C20orf204
CDKN1A
STX11
MNS1
FAM53C
CDC25C
H4C12
MAP1B
FAM78A
BRD2
TSN
MACIR
ITGB3
ACE
TMEM210
LRRC26
MAPKAPK5
TMEM51
H4C3
H1-6
NDUFS7
PIK3CD
TRIM2
RIMBP3
TCTEX1D2
NAAA
P4HA1
NKAIN1
ADARB1
ASCL2
IER5L
RPS27
RAB13
NEUROG3
UBE2L3
RIMBP3C
RIMBP3B
CALM2
THEM6
BHLHE40
SACM1L
HTR5A
PDE4A
TBX18
ALX4
ONECUT3
LUC7L2
FMC1-LUC7L2
FMC1
TMEM107
ZNFX1
EEF1A1
EIF3E
KRT36
H3C15
H3C14
H2AC19
H2AC18
GTF2B
B2M
C1orf198
ANGEL1
RUNDC3B
RAD23A
TRAF7
PRDX1
RPL27
ASXL1
PPP1R10
MRPS18B
SRSF7
JUN
CNOT3
H2BC11
H2AC11
PSMB3
PCGF2
H2BC21
H2AC21
H2AC20
TSPOAP1
NME1
DDB2
SIRT4
USP53
RCC1
RPS29
DDX5
CEP95
TMEM238
RPL28
MAGOH
PLEC
TUBB4B
NAT10
PMAIP1
RPS20
RANBP2
LY9
CWF19L1
RPLP1
TFPT
PRPF31
SSNA1
ANAPC2
BTG1
ZC3H10
RPL41
SP2
CSRNP1
RNF149
NGB
SYTL3
SNX5
MGME1
LETM1
H2AX
CLEC2D
RPL10
RASA3
IFRD1
MRPL44
RALGDS
MFSD4B
RPL29
JUNB
ZBTB37
DEF6
IL1R1
H2BC5
H1-4
RPTOR
WNT7B
CD226
SH2D2A
NTRK1
SLC43A3
PREX1
HNRNPA1
CBX5
GIPR
DENR
THBS4
MTX3
TAF12
TRMT61B
IRF1
ZBTB40
IRF9
FOXO1
EIF4G2
SCML1
PSMD9
HPD
CAMLG
CLK1
MAP3K14
IQGAP2
NOLC1
ASB2
SOCS3
MRPS23
LTA
HERPUD1
KMT2E
DLG2
CWC25
VPS72
ZBTB4
SLC35G6
RAB7A
POLR2A
PIEZO1
ZZEF1
CYB5D2
NUFIP1
H2BC8
H2AC8
GPALPP1
BCL2A1
TPD52
REV3L
GADD45B
TMEM39A
CDC42
AMZ2
NOP58
RANGAP1
MTF2
NUP62
IL4I1
ATF5
HAX1
BCAR3
RPLP2
PIDD1
NOC4L
DDX51
TNF
NPAS4
ENO1
EGR1
YARS1
S100PBP
GPR84
GALK2
COPS2
ATP5MC3
POFUT1
PLAGL2
TUT1
SRGN
SLC7A5
RPL23A
RAB34
IL21R
EHD1
DDX19A
TBL1XR1
SSBP1
RPS13
NEMP2
ID1
HPS5
GTF2H1
RSL1D1
RAC2
NR1H3
FASLG
EEF2
CKS2
ACP2
CCDC91
SDCBP2
RPL10A
ITPR1
DNAJB1
DNAJA3
APTX
PPP4R3A
PLAGL1
DDIT4
CENPM
ATF3
C16orf91
ZNF526
MRPS14
ISG15
AGRN
SIRT6
PTBP1
ID2
HNRNPUL1
COX18
ANKRD24
XPC
PCNA
MRPL24
LSM3
APBB2
ZNF79
YTHDC1
STK40
RUNX1
DENND1B
THEMIS
SLC1A5
RPS6
HNRNPH1
GNG3
BSCL2
ILF3
TLE3
CCNL1
PRMT5
MAP3K7CL
DDX21
CCT8
H4C4
FBXL22
DCP1A
CBX6
MAK16
LSM5
STX10
SRSF5
SAR1B
RPLP0
RMND1
MMACHC
IER2
EIF1
ARMT1
PFN1
MAP4K1
KCNAB2
ITGAL
GFM2
EIF4A1
EIF3K
WBP1
TXNRD1
SLFN13
SEPTIN7
MRPS25
INO80B
COX5B
RRM1
OXSM
NGLY1
CDV3
BTF3
SPAG7
ARID5B
STOML2
SRSF1
SLC3A2
MYL6B
ZNF106
SNAP23
OCIAD1
NDUFB5
MRPL47
CXXC1
MYO9B
MKLN1
HAUS8
ASXL2
TNFSF14
PGAM1
NANOS3
METTL16
CSTF1
AURKA
TRAF2
RPL12
LRSAM1
GABPA
ATP5PF
SLC12A6
NUTM1
NOP10
TSSC4
RAB6A
EIF3J
CAPN15
UBE2I
THADA
SKP1
SCAF11
LY96
LAX1
HNRNPA3
FBXW9
DNAJB4
CHPF2
ZNF267
RBM3
PPP1R15A
NR4A3
HMGN4
DPP9
BANP
ANAPC10
ABCE1
TMEM79
SMG5
SFPQ
RPS15
RGPD8
RGPD5
RBM17
PPIL4
KMT2D
SHISA5
RPL9
RPL15
NKIRAS1
LRRFIP2
LONP1
LIAS
CATSPERD
RNF213
PAFAH2
NAA16
MTRF1
MRPL30
MITD1
LMNA
H2BC4
H2AC6
FAM241A
CCNT1
C2orf42
MRRF
FADD
TSPYL2
NOB1
NABP1
MBOAT4
IER5
DNAJC16
CASP9
AIM2
VTA1
TMEM101
SUPT5H
RPS4X
NUP54
NMBR
KRR1
FBXO31
FAM102A
DDI2
ZNF101
PRKCA
METTL3
H4C1
H3C1
H1-1
ATP13A1
ZNF132
RHBDD1
CHD8
ASB8
ZNF207
SERP1
RFFL
HNRNPAB
EIF2A
SNX1
SNRPE
RPS2
RNF151
RBMX
IER3
GTF2IRD1
FLOT1
CIAO2A
CD69
ADORA2A
MRFAP1
GPN2
EFNA4
DIP2B
SAMD4B
PNP
EHD4
VASP
SH2D1A
RPL22L1
RGL4
CLN3
CCAR2
CASP8
C8orf58
BORCS5
APOBR
WDPCP
STT3A
POGLUT1
MSL2
MDH1
LOC102723996
ICOSLG
HSP90AA1
GSDMD
CDK12
C1orf53
ZNF764
SEMA3B
PWP2
MTHFD2
MORC3
LOC102724159
C8orf37
B3GAT3
SMIM12
SERBP1
SACS
RPL14
NFKBIL1
NASP
MRPL55
ITPRIP
IL23R
DDX39B
DCTPP1
CRADD
C19orf48
ATP6V1G2
ATP5MC2
TRMT2A
SH3BGRL3
RSL24D1
RANBP1
NECAP1
WDR4
TMEM259
MBD6
HSD17B12
HEXIM1
DDIT3
CNN2
CCDC107
ATG5
TRAFD1
RPL38
QTRT2
PRPF19
EPRS1
DLG4
CCDC191
APOBEC3A_B
APOBEC3A
ALG1
TCTA
SF3A3
RHOA
PPP1R8
POLA2
CITED2
BTRC
ZNF3
TXN2
RETSAT
PKNOX1
LYST
ELMOD3
UNK
SPHK2
SPATA5L1
RPL18
RFTN1
NRIP3
NFYC
MZF1
METTL1
MED18
LARS2
H3C13
H3-3B
H2BC18
GATM
FAM83E
EEF1AKMT3
CYP27B1
CCR7
TTC26
THOC1
RPL7
RNF224
RNF208
RDH10
NUFIP2
CYSRT1
CD209
CAMSAP1
ALG10B
RBPJ
KSR1
IMPDH2
DSTYK
ZNF668
ZNF646
SHF
RPS12
NOCT
CIRBP
CD96
XRRA1
SPRYD4
SPCS2
RPL13A
RAB11A
POU2AF1
POLR3B
LRRC61
GPR68
GOPC
CPNE5
ACTR3C
VMAC
TRA2B
RPS16
PLEKHA4
NDUFA11
KIF15
KIAA1143
COX8A
TICAM2
PURB
WDR90
MOK
COG3
ZNF589
USP4
SPG7
SF3B1
SCAND1
PRRT2
PAGR1
MVP
CLTC
RPL34
MLH1
EPM2AIP1
CD55
CCDC126
ZNF280C
TOGARAM1
POLG
NOL7
MYO18A
MORF4L1
METTL26
MCRIP2
KLHL28
CCDC174
ZNF688
TMIGD1
MCCC1
LRP8
KANSL2
FBRS
USPL1
SARAF
RBM25
PRRC2C
NOP16
MORN3
HMGB1
HIGD2A
GTF2H3
EIF2B1
CLP1
PPM1K
NXF1
MAP2K7
IPO4
DPP4
AP2B1
RRNAD1
MRPS7
LBH
ISG20L2
GGA3
ELK4
DNAJB2
BCL9
TMEM70
TATDN2
TAP1
SNX9
RPL5
RPF2
PSMB9
NME4
IL10RA
ELOC
XPOT
TBRG4
RACK1
MRPL45
ENOSF1
TRAF5
RPS3A
PLD6
PDCD1
NDUFB6
N6AMT1
MFSD8
GPR183
EID2B
AMN1
ABHD18
TOMM20
TAF1D
SPTBN4
SLMAP
SECISBP2
PPAN-P2RY11
PPAN
HIBADH
C11orf54
BLVRB
ANGPTL6
TRMT112
PRDX5
PNPLA8
NPM1
ERLIN1
EMP1
EIF3D
ECSCR
TUBA1C
TTPAL
TMF1
TCF7
IFNAR2
CREM
ABCD3
PPME1
NFU1
HNRNPC
HM13
G3BP1
FAF1
CLK4
C2CD3
ZBTB11
SLC25A23
OTUD6B
NACA
FAM227B
DTWD1
CSNK1A1
CRB3
AHNAK
WRAP53
TP53
MIS18A
LARP1
IPO7
EIF4B
DYNC2I1
CD247
RBM7
PSMD3
PBRM1
OSM
LSM14A
HDAC4
GNL3
C11orf71
MKRN2OS
MKRN2
LDHA
HINT3
GATB
SF3B5
SELENOI
NSRP1
KHDRBS1
FAM71D
ADGRF3
ABCA5
TRAPPC4
SNX17
RPS25
MARS1
GPR137
FARSB
EIF2B4
ARHGAP9
WDR76
TOMM5
NUP205
MFAP1
MAT2A
KTI12
ARF4
ZNF248
TXNDC9
TIMM17A
SEC14L1
PRDM1
PHB2
NUP42
KXD1
INSIG1
EIF5B
CDK13
TRMT10C
TOMM40
NR1H2
DISC1
UTP25
PPP1R11
NDUFAF5
MIDEAS
HILPDA
ETFBKMT
ESF1
BCL3
ACTR1B
NIP7
IARS1
ESCO1
DUSP11
COG8
C2orf78
BFSP1
WDR19
RAB18
LOC100289561
PSMB10
CTRL
TMEM186
PMM2
HBS1L
VCPKMT
STX4
MLLT6
LYL1
GUF1
MFSD14A
GNG8
ARIH2
PREPL
OAZ1
MRPS15
DUS3L
CAMKMT
AP4E1
ZNHIT1
ZNF33A
SLC30A6
PLOD3
MRPL20
HEMK1
DCLRE1B
C3orf18
AP4B1
TRMO
ZMPSTE24
RPS24
POLR3A
EBAG9
XRCC2
CFLAR
DIAPH1
TXN
LONP2
CHST12
ATF1
ABCC11
TAMM41
RNF34
GPN3
FAM216A
ARHGDIB
TMEM248
VPS29
RAD9B