ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
CCDC200
MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
PI4K2B
MAMDC2
KCNJ15
GALNT1
ZNF436
SUPT7L
SLC4A1AP
WDR74
STX5
AADACL4
KDM3A
ZNF408
ARHGAP1
ATF7IP
TARS2
NBPF1
WEE1
OBSCN
RPL27
IFI35
GABPB2
MLLT11
LCA5
RCAN1
SLC2A8
C19orf18
SAMD14
PRKACB
SF3A3
COL4A6
COL4A5
L2HGDH
DMAC2L
LGALS3BP
DUX4
IRF6
COX16
MSH3
DHFR
MTRNR2L2
FGD3
SRPRB
PPP6R1
TESK2
MMACHC
KRBA1
TMEM79
SMG5
NDUFB3
FAM126B
COX7A2
CDIPT
NOX5
NME1
PRSS41
PIH1D2
NKAPD1
FCGR1A
ARTN
COPS4
APOC3
APOA1
AURKAIP1
INTS5
GANAB
MTF2
RPS26
MRPL55
ARID1A
CRLF2
HDAC8
F2RL3
TUT1
MTA2
PRPSAP1
IKZF3
CLPTM1
APOC2
INKA2
DDX20
EVPL
RBBP5
LY6K
DNAJC16
CASP9
PLA2G2A
MED18
RPS7
AHCYL1
TPM3
C1orf189
TBL1X
SMTN
SMG8
GJC1
ZBTB26
RABGAP1
LIMK1
EIF2S1
ATP6V1D
DEFA1B
DEFA1
ZNF134
ZWINT
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DHX16
CCL20
ZNF806
ARHGAP39
CALCRL
STAT3
KDM5C
PAQR8
SLFN12
WBP1
INO80B
EPHA2
SMYD3
SLC33A1
ZNF426
ABR
SELENOH
GLT6D1
STC1
SLC9A1
TCTEX1D4
PLK3
BTBD19
ZNF226
HAX1
GDNF
RFFL
CELSR1
RAB33A
SERPIND1
AIFM1
UBB
PAXBP1
CCNI
ZNF555
DYNC1H1
CYB5R4
MID2
EIF3F
BAIAP2
ZNHIT6
GPC6
NOTCH2
TNFRSF1B
RPIA
SCTR
SAMD7
CELF1
MAP3K14
RBM33
KANK4
CDK12
MED1
RGPD2
RGPD1
GTPBP3
ANO8
ZNF540
ZNF571
ZDHHC6
VTI1A
WDR83OS
WDR83
MAN2B1
ZNF514
TIMP4
RMND1
ARMT1
MTBP
MRPL13
TEX46
KDM1A
RAG2
IFTAP
STK40
DUSP6
SNX27
VARS2
GTF2H4
PSMB7
ABRACL
NKX1-1
THG1L
ARMCX5-GPRASP2
ARMCX5
MT1HL1
COL23A1
IGFL4
SSBP1
ZMPSTE24
TMCO2
COL18A1
CANT1
C1QTNF1
PPIL3
NIF3L1
AGFG1
AKIRIN1
NPR1
ILF2
PACSIN2
BCL10
ARHGEF2
PDE4DIP
RCAN2
ELFN2
DHRS3
LRIG2
SLCO1A2
RPH3AL
VSIG1
TSKU
LPIN1
FGFBP3
PPIP5K2
REXO4
ADAMTS13
PLEKHG1
ZNF594
ZNF331
GNB1
KIAA0754
LY6L
RNF125
NID1
ZNF383
ZNF585B
SLC5A1
ALG14
UTP3
TTC26
PLK2
ISY1-RAB43
ISY1
ZSCAN32
ZNF174
TTYH2
NOL12
RPL38
MICALL1
DNAJC25-GNG10
DNAJC25
CCDC174
AP1G1
MRPL11
CITED4
TFB1M
IL17F
ZNF56
ZBED9
DOK3
DDX41
MRPS23
VTA1
NMBR
EFHD1
ZBTB33
TRIM5
TRIM22
DUSP14
EDF1
RDH12
TAGLN2
YWHAQ
RAD51AP1
C12orf4
KAZN
C1orf174
AEBP2
GPS2
EIF5A
ASAP3
GBA
DNAJB12
RPA2
CORT
IFNL2
PRRT1B
RRAGB
RHOQ
ATP6V1E2
ZNF790
UQCRC2
TMEM242
SYAP1
CTPS2
PPRC1
PM20D2
CSNK1E
RERE
USP21
PCYT1A
UFC1
NRARP
ZNF165
OR1F12
HAPLN2
B4GALT3
ZW10
CLDN25
HEXB
PISD
FAM124B
TTC39C
DLX4
CELA2A
RPL11
MRPL30
MITD1
PIKFYVE
C3AR1
NEMF
TMEM101
ARMC1
TRMO
THEM4
PES1
GYG2
YPEL3
TBX6
ARID3B
ZBTB38
TIMM10
SMTNL1
TRUB2
COQ4
TMEM72
APOLD1
ANKRD35
TOMM40
KAT6B
FRRS1
CASP10
LRP6
PSAP
WDR33
BNIP1
FANCC
TAAR5
SFRP2
ZC3HAV1
SCARB1
TMEM247
ARL15
MPP1
IFI6
SEC22B
ZBTB25
ZBTB1
ZNF764
ZNF688
RNF207
RPL22
UBE3B
KCTD10
ZNF251
TBC1D19
MED11
ZMYND15
CXCL16
FAAP20
RBM25
RHOD
CD14
TEX28
TFPT
PRPF31
ZNF513
SNX17
EIF2B4
PRSS21
ACY3
C2orf66
PEX3
ADAT2
NCOA7
GTF3C3
DPP9
OSBPL9
FAM89A
LIMS4
SLC25A33
PDE12
TLE4
KSR1
HEATR1
GPN2
GPATCH3
ZNF704
TMEM262
ZRANB2
GPR35
DDX47
C5AR1
CLDN7
ADRA1A
BZW2
MAST2
AK2
LSG1
LIMS1
SGPP1
ANO9
PTDSS2
SLC25A53
FAM199X
GTPBP4
ZNF577
RAB30
NR1H3
ACP2
ZNF461
SIN3B
ADAT1
CTSK
KANSL3
FER1L5
PHC2
TNPO3
VPS52
RPS18
B3GALT4
RPS24
POLR3A
KRT19
TMEM125
SLC35B1
BAHCC1
WSCD1
ZXDC
SNRPB
PARP15
SCMH1
PARP9
DTX3L
PRRC2B
BORCS6
DCUN1D2
FAM81B
YJU2
PSMD3
ECPAS
ISLR
PTPRN2
TM9SF1
IPO4
ZNF454
UFD1
CDC45
ZNF585A
TNFRSF1A
ENKUR
PAFAH2
MTR
PTPRH
STX1A
SLC39A9
ERH
TIMP3
PCNP
SASH1
TTLL2
MDM4
RABGAP1L
EIF3E
TIMM22
HECTD4
HEMK1
C3orf18
AMHR2
ALG10B
RUVBL1
PPP1R11
POLR1H
HEBP2
ZNF510
GNA13
TAF12
PLEKHM3
ZNF335
TRAFD1
TRPV2
CDK5RAP1
DDX18
KDELR1
GRIN2D
SPINDOC
CHMP7
LMBR1
ANKRD13C
RPRD1A
MAN1C1
SHOC2
BBIP1
COMMD2
TEFM
SMIM12
EPRS1
PIGL
NCOR1
PYGB
FAM184A
CCNC
ABL1
TM2D1
SPHK2
RPL18
FAM83E
SULT1C2
GPC1
OCIAD2
NEURL4
ACAP1
RCC2
ZNF750
SNRPD1
IFITM3
PDE10A
CEP120
CLASP2
PRDM1
RMI1
HNRNPK
PREPL
CAMKMT
GYPC
ARL4D
ATP5MC2
CCDC97
LIG3
FRA10AC1
ZNF221
COIL
TTC14
NOL8
CENPP
TTI2
AASDH
PHF5A
ACO2
APOL6
IL22RA2
ZBTB40
POLG
FBXW7
DDX42
CCDC47
MTHFD1L
FAF1
CDKN2C
DHX8
TMEM259
CNN2
NECTIN4
NEK2
FAM222B
KAT7
LSM4
FAM209A
EAPP
TTC32
EXOC2
VMO1
PSMB6
GLTPD2
POMGNT1
LURAP1
CD209
CDC73
NR1I2
GLRX2
S100A11
SEC16B
ZNF550
DMAP1
CCNY
USO1
OPN1MW
OPN1MW3
OPN1MW2
NUF2
MED23
SAR1B
SESN1
CEP57L1
AKR1A1
PC
LONRF3
GADD45A
GMEB2
DYNLRB2
SNX12
SLITRK5
CDKN1A
SLC1A3
MROH7
PLCD3
ACBD4
RPL26
KRBA2
IPO13
SH2D5
DAPK3
CREM
RBL1
ARMC7
TIMM9
KIAA0586
TBC1D9
CCKAR
NARS2
BANP
CMSS1
SRSF1
NEK10
OAZ3
KIF5C
MAGEA11
PXT1
KCTD20
LYPLA2
GALE
ZNF2
PFDN1
TUFT1
KPNA2
SCP2
TRAPPC8
ZNF260
KIF25
DHRS2
METTL25
CCDC59
MRPL1
PCBP2
ANKRD17
PTP4A1
SOD2
UBAC1
SMAD5
AAAS
PDSS2
NYX
ANOS1
ZNF501
ZNF502
GTF2B
GALM
ZNF891
ZNF10
INTS2
KIAA0319
PJA1
SGMS2
TMEM128
LRRFIP1
LACTBL1
GLIPR1L2
ARL14EP
PEAK1
HMG20A
ZNF793
EFCAB14
BIK
GPR1
MRPS33
WDR11
SIT1
CCDC107
ARHGEF39
MRPS15
GOSR1
KDM8
JMJD1C
MOB4
CHAD
RHOC
ATP5F1B
CNGA1
CALD1
KRR1
NIPAL1
ZNF484
DBF4B
RCN1
TACC1
ZNF662
RTTN
ID2
SREK1IP1
CWC27
ZNF230
FDXACB1
C11orf1
ALG9
HIRIP3
RPL37A
CLN3
APOBR
PNPLA5
KIF2C
IMP4
CCDC115
ABLIM1
UIMC1
CPD
CZIB
ST20-MTHFS
SLC27A5
POLD1
RFXANK
BORCS8-MEF2B
BORCS8
ZBTB45
NR1H2
LCT
TTLL12
C11orf49
WDPCP
TMEM167B
CDK19
AMD1
MDH1
PHB2
NFYC
NFATC3
PPIH
CDC5L
PCDH9
SUGP1
MAU2
KRT31
STBD1
UQCRH
LRRC41
SNIP1
DNALI1
OSBPL8
MYO1B
GGTLC2
PRRG2
NOSIP
IRF9
ZBTB8OS
RBBP4
CORO1C
KDM6B
FBXO46
MTMR11
C19orf48
AJUBA
DRD4
EIF3D
CDHR5
SCT
SH2B1
INTS4
RAB42
DNAJB4
CDK14
MRPL45
NCF4
TM9SF4
RDX
SLCO4A1
FUBP1
TMEM127
CIAO1
SUGCT
MPLKIP
GABARAPL1
PKN2
NME7
BLZF1
NRDE2
BRF2
ATG4C
SF3A1
CCDC157
PRDM4
ADGRF1
NFAM1
C2CD4D
THEM5
ZSCAN30
WDR36
PDE7B
FHL3
SMARCD1
CORO2A
LIMA1
UTP11
TNFAIP1
IFT20
ZNF572
INO80C
RIPPLY2
KCNH4
RSPH3
ADAMTS17
HSD17B1
COASY
MLX
HCRT
TIMP2
RPAIN
NUP88
MYCBPAP
RHCG
ZNF350
TMEM30A
MAP7D2
PRKCI
RANBP3
ERVFRD-1
MTRNR2L10
TRMT1
NACC1
GABPA
ATP5PF
TNFRSF10B
MAP2K3
JUN
MRPS18C
HELQ
NOP16
HIGD2A
MYO1H
TANC1
LGI1
UBE2L3
NRSN2
RIMBP3C
RIMBP3B
MVB12A
GPX1
BNIP5
SGIP1
C12orf40
ABCD2
ZSCAN4
BST2
TPK1
EMILIN1
OST4
KHK
CES3
CSTF2T
SLC35A4
APBB3
SRA1
PSMD9
HPD
BEST4
ERICH4
DMAC2
MED16
CALCB
FKBP5
F2RL1
ZNF302
SF3B5
TIMM50
WASF2
TBX18
SUMO3
MNAT1
ZNF518A
PSMG4
SPOCK2
STAC2
STARD10
YBX3
SSU72
GDF6
ASB5
NEDD4L
DNM2
CASQ1
ATP5MC3
TRAF4
LMNTD1
PTPRK
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
ZNHIT3
CHST4
ZNFX1
ETFBKMT
TMBIM6
ZBTB7B
UBQLN4
RAB25
LAMTOR2
LENEP
TEKT3
GFM2
MIDEAS
TCEANC
HAUS4
DNAL4
NHLH1
TSFM
EEF1AKMT3
SPRR2F
DCT
WTAP
SIRT4
NEK4
ITIH1
POC1B-GALNT4
POC1B
GALNT4
SLC19A1
WDR5B
FBXW10
C8orf37
BEST2
LOC102723996
ICOSLG
TMEM41B
CD109
EIF4A3
CYB561D1
ATXN7L2
PRKG1
TEKT2
ADPRS
AAR2
ABCF3
CRADD
COL9A3
KXD1
PFKP
TTC9B
RTL9
MBNL2
CCNP
STRA6
AP2M1
LSM5
AVL9
CTR9
SCYL3
NOL11
LMNA
CHRNA9
ZBTB24
GLCE
HAAO
DEFA3
MYH2
ZNF3
BABAM1
ARID2
UBQLN1
FOXO3B
CSF3R
GSC2
SLC25A44
DCTPP1
CDH1
SAT1
NUP54
CEP85L
CGGBP1
CYB5R2
C3orf38
ZBTB6
RC3H2
PTAFR
PRKCSH
CCDC151
PAFAH1B1
IARS2
BPNT1
ACTR6
TEF
LGI2
THOC2
KIF3B
TMBIM1
LOC100509620