ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150543 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◣ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

LDHD
ZNF572
CCDC200
TATDN2
SUMO3
GORASP2
AADACL4
IL36A
RBM33
C1orf167
MAMDC2
KRBA1
AQP10
BCR
TMEM89
THEM4
IL21R
TXNRD2
IRAK2
ZNF32
FAM184A
ZNF623
YPEL3
TBX6
WDR74
SNCG
MMRN2
YY1AP1
DAP3
DKKL1
COL18A1
DBNDD2
MROH7
LONRF2
MON2
GSTM5
KCNJ15
PPIG
MAP1LC3B2
MBOAT4
UBE2F
TMEM44
POM121L2
PRRT1B
ARHGAP39
CEP85
AFAP1L1
FAM209A
ENG
ZNFX1
H4C8
LEP
ZNF562
APOL4
SLC27A5
ZNF263
MTRNR2L8
SLC1A7
ZNF317
RBPJ
ADCY10
ADI1
BAAT
IGFALS
ZNF761
EXTL2
GPRC5C
TDP2
ACOT13
SARS2
MRPS12
TMEM62
ZFP69
GRAMD4
FAAH
RNGTT
TRIM32
ASTN2
CACNG1
NOS3
CATSPERE
SYT3
CTAG1B
CTAG1A
BSDC1
LOC102724265
RTCA
MTRNR2L2
MSH3
DHFR
ZNF341
TNXB
C4B
C4B_2
GOLGA5
ZNF426
OPN1SW
HERPUD2
BCL7B
LCN8
EHHADH
LZTR1
CDYL
CFAP43
SCCPDH
S100A5
S100A4
S100A3
FEM1C
ADAR
APOL1
ATXN2L
DLK2
GAL3ST2
HEATR4
OR4K17
ZNF577
ANKFY1
ZNF57
LRRC61
ACTR3C
EFCAB10
PRSS38
DGKH
DUX4
ZNF780B
DEGS2
LOC110384692
C4A
MSRA
HSD17B6
ZSCAN31
C19orf18
FBXO8
CEP44
GUCA1B
AGGF1
ELFN1
IFT88
KRTAP10-9
AUH
ZNF438
CATIP
RABGAP1
RIC8B
NDUFS4
HYAL1
SPDEF
TRANK1
BCL7A
SPATA45
ZNF683
CYP17A1
ESR2
MATK
PPP5D1
CALM3
FAM227B
DTWD1
GAS2L3
EPHX2
GATAD1
UBAP2L
C1orf43
ZNF324B
ZNF669
KAT6A
APOBEC3B
SPSB1
ZNF439
GLO1
AIFM2
ACAA2
PSEN1
KDM3A
BANP
ST20-MTHFS
ACSM2B
PDRG1
C2orf88
TOP3B
PDE7A
C9orf153
L2HGDH
DMAC2L
SAMD1
CDCP1
TRIM48
CAB39L
FN3K
PLVAP
ZNF398
ZNF425
TRIM38
GTDC1
ADA
EPS15L1
SMIM31
LARP1
C1orf158
SNIP1
DNALI1
TMEM35A
FAT1
ST6GALNAC6
SLC35G5
PARP15
NDUFA8
MORN5
PDCD7
OSBPL8
CUL2
PPARGC1B
RBBP5
REN
LRRC34
CCR7
TMEM42
TMEM9
AADAC
MRPL34
ABHD8
ANP32D
MUC3A
OXA1L
DEK
TAAR9
TLCD4
NUDT9
TLR2
ACOX3
TRMT44
SWAP70
CCDC130
SDR42E1
ZNF211
TMEM107
AACS
LY6H
RSAD2
HDAC9
ERAL1
TNK1
RFC1
GPX4
POLR2E
ACYP2
MID1
DDX19B
HDLBP
POLE4
C1orf159
TIGD2
PTGS1
SSH1
SEC14L1
CNOT11
HSFX4
NME4
SLC35E2A
CEACAM21
PAFAH2
SMCO1
RGPD2
RGPD1
CCDC181
APOL3
NUP210L
ASS1
HTR3E
COL23A1
ZMYM6
JAGN1
VBP1
CD200R1L
LUC7L2
ACTL8
CEP72
PCP4L1
PDE6G
EPO
SEM1
SPAAR
RBM28
ZFP1
PACS1
SOAT2
FBXO17
OR2W3
UBLCP1
ZC3H10
RPL41
ZNF816-ZNF321P
ZNF816
HIP1
ANKRD54
EIF3L
TMPRSS12
SEL1L
ERICH3
GPAM
SAP130
C1RL
FANCL
FOXN2
SAR1A
SRL
NT5DC1
INSL6
FMC1-LUC7L2
FMC1
RSL24D1
ADAP1
YTHDC2
PDE2A
CABIN1
GSTT4
WRN
RAB40B
P2RX6
YBEY
MCM3AP
FRG2C
ITGB3BP
EFCAB7
FRG2
FAM153B
PDE11A
APOA1
CFHR4
SULT1C3
ZNF117
BCAR3
LMLN2
TMEM229B
NUF2
MTF2
RAB37
CBX1
YWHAQ
CALCB
MAPRE2
NARF
GBA
RABGAP1L
CAT
MTRNR2L1
RPS7
DMAP1
SNX16
ZFP30
AURKAIP1
SAMD4B
DUSP6
SF3A3
SSBP1
C1GALT1C1L
COX16
CYBC1
FBXO31
PNPLA7
SUPT6H
SDF2
TARS2
JMJD1C
TBC1D19
PAXBP1
FASTKD1
MAD1L1
SELENOH
GALNT1
GPD1L
DCP1A
RPS29
SLC2A7
C16orf54
COMMD2
MED23
TRIP4
PEX3
ADAT2
FRA10AC1
SATB1
TMEM242
MMACHC
RPL27
HTR5A
NFE2L3
RBBP9
C3orf14
RPL11
TTC32
RNASET2
OAZ3
DSTYK
NPAS4
CLTB
SUPT7L
SLC4A1AP
TATDN3
NSL1
REM1
DEFB124
LSS
TMX2
MED19
SLC24A1
TTLL12
ZMPSTE24
SCGB1C2
SCGB1C1
CALD1
THOC5
PIN4
NDUFS7
DNAJC25-GNG10
DNAJC25
TMEM14C
ZNF566
YJU2
NME1
SLC38A9
SLC33A1
EIF2D
INTS12
GSTCD
CANT1
TACO1
TEX50
STX18
TEFM
COLEC11
ADAMDEC1
DLAT
RPL37
REEP3
RMDN2
DUSP16
MNAT1
CALCRL
LSG1
POLR3B
STX16
RPS14
DRG2
CADM2
CASP10
SKP2
LMBRD2
ATP9B
ZNF829
ZNF568
GTF3C3
HMGB1
TMEM41A
GTF2H4
ALG10B
DNAJB12
METTL25
CCDC59
NEMF
GTF2A1L
STC1
UTP3
PPIP5K2
FABP6
NOTCH2NLC
SERHL2
PDE4DIP
DHRS2
DCAF10
GTF2H2
INTS5
TMBIM4
TFPI
CASP4
SAR1B
MOB4
KDM1A
WDR11
MTR
SRSF7
SEC22B
RTTN
ZNF792
ATP5MC2
VTA1
NMBR
NOTCH2NLB
NOTCH2NLA
USPL1
REXO4
ADAMTS13
CD14
DPY19L4
PIK3R1
DISP1
GABPB2
TRMT5
SLC38A6
TBCK
AIMP1
VN1R4
PRDX3
MAIP1
RAD54L2
KANSL3
FER1L5
TMEM68
TGS1
GCNT1
STAT3
SLC25A51
CLEC12A
RERE
TFPT
PRPF31
IPO4
TEX46
ZNF556
CNOT3
CLK4
ATF7IP2
MTERF4
KIF2C
PUM1
ILF2
TOR1AIP2
TOR1AIP1
WDR36
ATF7IP
TTC26
EIF3F
NCOA7
MRPL44
KMT2A
SAMD4A
NDUFB3
FAM126B
ZNF408
ARHGAP1
POLR2J3
FGD3
SLC44A1
RTP3
SLTM
MRPL30
MITD1
MRPS31
RAB30
ZNF30
GTF2H2C_2
GTF2H2C
EPRS1
CDK5RAP1
STK19
DXO
ARRDC2
CCDC97
INO80C
PPP1R3B
NR1H3
ACP2
TTI2
PPP6R1
MRPL40
HIRA
INPP5F
CFAP298-TCP10L
CFAP298
ZNF391
RCHY1
H4C11
MRPL21
IGHMBP2
CLDN4
KLHL41
SLC45A4
MTIF2
TMEM43
CHCHD4
H4C12
IQCF2
MRPS18C
HELQ
PSMF1
OR8B3
COX7A2
PMF1-BGLAP
PMF1
OPA1
LMBR1L
BNIP1
PRKAG2
UBE4B
ZNF841
S100A9
SLC41A3
POLR2J2
NUP54
SNAP47
JMJD4
BAIAP2
LBR
CCDC150
RCAN1
NSFL1C
SNRPB
CCNC
TBL1X
TULP4
DNAJB13
IQSEC3
MRPL48
RNF217
ADNP
KLRD1
TMEM79
SMG5
GFM2
C8orf37
GLIPR1L2
C18orf21
COPS7B
SMG8
BMS1
ATR
TTC5
OR1E3
USP30
GINS1
NBPF1
PES1
PDCD6IP
XKR7
BRF2
ANK1
MRPL1
OR2AP1
ZNF554
MTOR
THOC2
DGKQ
RNF187
GALK2
IQGAP2
ZNF292
ATP1A1
RAB6D
PRIM2
ASPSCR1
KLHL20
AKAP10
MS4A1
TMEM202
AARS2
ALKBH3
IL36RN
IL36B
GSTA4
TSFM
ZNF772
LRIG2
TTLL1
FGF1
SGCE
PEG10
CELF2
FRG1
MRPS23
ZNF134
EIF1AD
BANF1
ZNF383
FAM133B
OPRL1
LKAAEAR1
CYP4X1
N4BP2L2
HACL1
BTD
ZSCAN25
TTC23L
FANCI
TRUB2
EPB41
COQ4
PHB
ZNF165
PRSS41
MTBP
MRPL13
GTF3C5
SCMH1
PLEKHM3
SF3B6
FAM228B
CDC73
COPS4
IAH1
FAM160B1
CCDC83
DUS1L
SLC35A3
RUVBL1
EML2
HYOU1
ZNF582
TUT1
GTPBP3
ANO8
DDX18
SCNM1
LYSMD1
SDHAF3
ARID1A
TMED1
LSM5
ZNF280D
NAT8
ZSCAN22
CENPV
CCDC88A
SMU1
DHX16
TGFBR2
SH3BP5L
FAM98B
ZSCAN30
C10orf88
TPK1
LRP6
COA6
TMEM222
VPS13B
ZNF677
VN1R2
NECAP2
RPL5
CLTC
ZNF385A
SNX17
EIF2B4
RBM45
CLUL1
CEP85L
RMND1
ARMT1
NOP16
HIGD2A
TMPRSS7
AVL9
ERBB3
SCAND1
CPPED1
ANXA3
SMARCD2
TMOD1
ISY1-RAB43
ISY1
C17orf75
MRAP2
WDR55
EIF3E
PUS10
PEX13
FBXO38
R3HCC1
PIH1D2
NKAPD1
TMEM101
PDE7B
SUGCT
MPLKIP
DPP9
COPS2
HSPE1-MOB4
HSPE1
HSPD1
CT45A10
CTAGE8
CTAGE4
ALG10
SNRPD1
TMA16
ATG4C
METAP1D
ABCC10
MACC1
DHTKD1
MRPS14
SEC13
ALG14
FGFBP3
COX8C
RPS15
GRPEL2
ZNF670
DRAP1
C11orf68
SREK1IP1
CWC27
CBWD5
TTC4
ARID3B
CCNI
HEATR1
CBWD3
CCSER2
HAX1
PTDSS2
SMG7
POLDIP3
GASK1A
SMIM13
CCR6
SPARCL1
LGR5
ZNF501
LRTM2
RNF125
ANO9
CCDC149
NUP107
SRRM3
PDE6D
CHD1L
PRPF18
FBXL12
CD248
RNF6
PHIP
DNAJC24
DCDC1
MMEL1
POLR3E
EEA1
NBN
METTL9
TPM3
CEP120
ZBTB45
NRBP2
CLASP2
RPS3A
GNAL
SNRPB2
ZMYND8
HUS1
PRKAR1A
MAN2C1
WBP1
INO80B
NDUFS3
METTL8
KBTBD4
DCAF17
B4GALT7
TTC38
PKDREJ
SOD2
AIG1
ZNF609
PFKM
APRT
MRTFA
DDX1
RPL7A
MED22
DCLRE1B
AP4B1
FLT3LG
CCDC107
MED18
ZFP42
RPS20
MRPL3
TARS3
TSPAN10
NPLOC4
HDAC2
C5orf34
ZNF546
CCAR2
C8orf58
MTHFD2L
NFIB
CCNY
ZNF561
ALDH7A1
CCDC174
CRKL
ABCG1
TMEM259
CLUAP1
ARHGAP19
LIPA
SLC35B1
TIAM1
SRP9
TMEM114
FOXN1
PRELID3B
MLEC
GARS1
AASDH
CASC3
PIP4P2
ZNF441
ZNF512B
GFI1B
CREM
PRKAB2
CRH
PDGFD
RABGGTA
ARMH3
TPM4
MEMO1
PHC2
ZBTB40
PACSIN2
CTAGE9
CCDC115
CASS4
CT45A7
PLCL2
DNAJC6
ARHGEF12
IRF9
KRR1
ATP10D
POLG
CNN2
ZNF540
TPR
ODR4
STOML2
NDUFA4
LARS2
ABCB10
PLSCR4
TCTN3
CERS5
NSUN7
CUL5
B4GALNT2
UBOX5
FASTKD5
KNL1
RIF1
ORC4
MBD5
ADRM1
SEC23B
RRP15
RPS26
PRKAB1
NOL12
TMBIM6
NMNAT1
LZIC
C16orf90
ZCCHC4
VIRMA
SESN1
HLA-E
ATP5MC3
FUT3
SLC35G3
MRPS33
TIGD1
EIF4E2
TMEM70
OR6J1
ELOC
ELAVL3
GTF3C2
ZNF699
TMEM132A
MPHOSPH8
POLN
HAUS3
FAM13B
CBWD6
SMIM12
MAPK1IP1L
MSL2
NNT
LPIN1
GLIPR1L1
CAPS2
UIMC1
SURF2
SURF1
KMT2D
FAM234A
TRAF6
RAG1
NDUFC2-KCTD14