ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
PAXBP1
GOLM2
FRG2
TINAGL1
OTUD7A
SLC39A14
COL23A1
UNC45B
NLE1
KCNIP4
NPNT
UBE3C
ZMYM3
CMSS1
FILIP1L
DUX4
TTYH1
COQ8A
C2orf83
FAM236B
FAM236A
DACH1
LRP2
KCNK18
C1orf174
MAPK11
SNX16
SSBP1
CRYBB2
POLG
TNRC6A
STK38
ARHGEF35
SYT2
ITPRIP
NECTIN4
KLHDC9
BAIAP2L2
NBPF1
B4GALNT3
ELMOD1
EPN1
TMPRSS5
FANK1
POLN
HAUS3
TCF7L2
TAT
FAM107B
MUC1
C16orf87
MTRNR2L8
SLITRK3
ELAVL2
SPDYE14
SPDYE10P
FXYD3
ARHGEF5
KRTAP9-9
KRTAP9-6
ART1
TFCP2L1
LOC105370980
CLTC
MTRNR2L2
MSH3
DHFR
CPLX2
LYRM1
DCUN1D3
SCGB1C2
SCGB1C1
ODF3
TBC1D3F
TBC1D3L
TBC1D3B
COL6A1
DYNLL2
MROH9
TSR2
PDIA6
KRTAP2-3
KRTAP2-4
CLEC7A
UBAP2L
C1orf43
RABL6
CCDC183
ERRFI1
TES
CCDC200
CLDN20
TRIM48
RAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TMBIM6
NOTCH2
E2F3
EREG
PDE4DIP
ECHDC1
OR8J3
H3C13
H2BC18
MTRNR2L1
CBR4
UBE2Z
SULT6B1
TMEFF2
ELOA2
SUV39H2
ZNF679
PDE6D
COPS7B
ANXA2
ACTB
C11orf97
SPATA16
RAB40B
SLC35B1
APPBP2
SIMC1
CBWD5
UBC
IDNK
DLGAP4
WNT9A
H2BC21
H2AC21
H2AC20
CTAGE8
CTAGE4
ZNF165
OR1F12
HMGA2
ANTXR1
ZP4
PDLIM5
LOC107986453
HNRNPA3
OR14I1
PCBP3
RNF135
CCDC30
PTP4A3
SHTN1
KRTAP10-12
ZNF517
ZNF34
RPL8
SRSF5
ARFGEF1
YBX3
YIPF5
KCTD16
SOX5
OR4C12
NAV3
LUZP2
ACTG1
PCDHB6
ZNF718
ZNF595
DMBX1
H4C14
H3C15
H3C14
H2AC19
H2AC18
MND1
TBL1X
CHEK1
RAB11FIP2
PIN4
LOC102724770
DGCR6
MRPL2
KLC4
TOB1
GIMAP7
PTK7
SPATC1L
TCERG1
NCOA5
GOPC
PCID2
CUL4A
TUBD1
RPS6KB1
DSCC1
RNASE10
SMNDC1
IER3
FLOT1
TXNRD2
COMT
ZHX1-C8orf76
ZHX1
CLUL1
ADAM15
SLC25A32
DCAF13
STRIP1
CCDC85B
FOSL1
MFAP3L
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
ARHGAP39
HNRNPA2B1
CBX3
STK3
H4C15
UBR5
SLC12A8
EIF3F
NFE2L1
SPIDR
DHRS9
OR6P1
DIRAS2
GABRA2
GABRG1
CD163L1
FBXO11
RNF19B
GRHL2
SPATA22
ASPA
TMSB10
EGR1
PCMTD1
PCDHB5
SRPRB
ID1
VCP
FANCG
SLC25A3
HECTD3
USP25
PRKAR1A
UBE2O
AANAT
FH
H2BC17
H2AC17
CSNK1G3
H3C12
H3-2
FAHD2B
KRT19
KRT15
SLC25A31
PLA2G7
CYP11B1
RPS20
MRPS23
ECH1
RAB4A
LGALS4
CYP2A13
ZCCHC4
MFSD14B
PTEN
KLLN
SEC22B
NCK1
MBNL2
CSNK2A2
FRMD3
PRR20G
MFSD11
METTL23
JMJD6
SRSF2
EEF1A1
ZNF280D
SLC22A23
ERMARD
NGB
ABHD10
EBPL
RECK
ELOVL6
UBE2V1
H2AX
DPAGT1
LMBR1
HMBS
SCAF11
GALNT10
HSPA6
ATF1
PGBD2
CTNNA1
DTD1
CNTLN
F2RL1
LRRTM2
CPSF6
FMNL2
DR1
CEP120
RMDN1
CPNE3
MAML1
BZW1
NEMP2
ZFP36L1
RXFP3
NSFL1C
TRIB1
PDXDC1
SLC16A5
MRPS26
GNRH2
XPC
LSM3
POLR2M
OGFOD3
HEXD
ACSL3
ZBTB38
TEX10
FGGY
MAP3K2
TTLL7
AREG
CXCL2
PHKA1
SLC30A10
IQCF2
OSER1
AFTPH
C7orf26
GCFC2
ENTPD7
ARHGAP28
ZFP3
OR6C70
NRROS
SLF1
KIAA0825
TMEM71
PHF20L1
HERC6
EXOC6
BRAF
CBR3
IGFBP4
SLC5A8
RPL18A
CKS2
SECISBP2
ADAP1
VWA2
KRTAP2-2
KRTAP2-1
TMPRSS6
ZFP91
LPXN
DNAJC25-GNG10
DNAJC25
SLTM
RCN2
GPD2
IGDCC3
BAGE
BAGE5
BAGE4
BAGE3
SMIM31
HMGB1
UBE2D1
SMARCD2
OGA
FAM8A1
ZNF800
NFE2L3
SEC61A1
KANSL1
RAD21
LRRC58
CEP55
DUSP5
PPP1CB
CIB2
CCSER1
TULP4
CBWD3
PTMA
HDLBP
MALSU1
ANKRD18B
VANGL1
PLEKHG1
SLC4A4
HORMAD1
MID1
KRTAP1-1
TMEM43
CHCHD4
PLEKHA8
FKBP14
CHD1L
GOLGA6L10
PCDHGA1
SMC6
GEN1
H2BC4
H2AC6
RMI2
SLC30A5
TBC1D5
FBXO34
NMI
PCDHGA2
CTAGE15
GPR15
CLDND1
EXOC2
DDX59
SGK3
FAM149A
METTL7B
NUTM2D
SCO1
ADPRM
CCDC88A
EXT1
PARP2
CACUL1
EIF3A
SLC20A1
FAM120B
INPP5F
XYLB
FDX1
TRIM26
EPM2A
PCDHB8
PCDHB16
PSKH2
PCDHB7
PSMC5
FTSJ3
RMND1
ARMT1
LRRC37A3
WDR43
MRPL15
RESF1
OXR1
MINPP1
SFT2D3
MTHFS
OR8B3
KCNS1
TBL3
RPS2
RNF151
NDUFB10
RPL3L
H4C9
H2BC11
H2AC11
SCAF4
UHMK1
FBXL4
APEH
TTC5
SIRT5
FAM160B1
ZNF705E
CRPPA
SLC35F3
PHTF1
FAM221A
SPATA13
HNF4G
ADAD1
SRRM2
DUS1L
ZKSCAN1
NFKBIZ
NDUFAF6
INO80D
MIDEAS
HSF1
BOP1
MLYCD
NEUROG2
ADCY6
CADM2
EGFR
ZFHX4
PCDHB14
PCDHB13
TM4SF1
PCDHB12
SLC38A9
KBTBD8
CBWD6
LRRC59
GRPEL1
CLN5
PROSER1
NHLRC3
NR4A2
LEPROTL1
SLC38A2
C5orf63
MTAP
NFIB
CKAP2
CLCA2
VPS36
SPG7
MAP2
GRK3
SPIN2B
CHIC1
SPIN2A
ITPRID1
DAZ4
DAZ3
WASF1
CDC40
GNAL
FEM1B
NOMO3
GBE1
LOC100287896
LIPT2
ABCC6
ENTPD6
GCLM
FECH
UNK
H3-3B
RWDD2B
FRG1
TTBK2
TFRC
TRRAP
TMEM130
NCOA6
TKT
GPRC5C
SPATA6
KRTAP4-6
KRTAP4-5
EIF3C
ACOX3
TRMT44
MKRN2OS
MKRN2
HNRNPL
ITGA6
WDR1
SNX9
DENND4A
SH3BP5
KLHL7
SUPT20H
MAP3K21
MAEL
ILDR2
ENGASE
PCDHB2
PCDHB3
MST1L
REXO1
STK40
ARHGAP19
DHX35
TXNDC12
BTF3L4
CUL1
SLC7A5
SCYL2
DEPDC4
GOLGA6L7
SPTBN1
IGDCC4
UMOD
WDR4
CHMP7
EMB
IL10RA
GCNT1
PCLO
CDK17
ARRDC4
MARS2
KITLG
NCKAP1
LRP11
THSD7B
RPS19
C10orf95
RAB18
POMGNT2
EPB41
LIG3
WASHC1
MED13
PAM
GSTO1
RAN
NDEL1
USP10
PPP1R2B
CABCOCO1
AK4
ZSCAN25
FKBP1A
ZDHHC3
EXOSC7
FAM193B
MTERF1
IQGAP2
WDR45B
RNASEH1
JMJD1C
VEZF1
SEPTIN4
LAMTOR4
MAP11
EIF2B2
TAPT1
HOMER1
GFOD2
TMEM268
INPP4A
BFSP1
TMX4
ZNF664-RFLNA
ZNF664
CCDC92
ZBTB7C
FA2H
ELAPOR1
MLLT3
SARDH
PCDHA6
PCDHA5
TMEM70
ELOC
RPS6
USP36
PET117
KAT14
SMC3
TRIM25
NDFIP1
PANX1
TPD52
ATMIN
EYA1
EHD4
SLC25A12
REST
C1QTNF12
SYBU
SPHKAP
GPS2
EIF5A
PTK2
VOPP1
NFRKB
NOCT
IMPACT
CKAP5
ODC1
ERN1
DIS3
RANBP9
GEMIN4
CLK4
PTPRA
UBALD2
C3orf70
XKR6
ZFHX3
SAMD4A
FLT4
TMEM202
MYZAP
GGT2
GCOM1
CDK8
ABRAXAS2
DDX1
ARL17B
TRMO
ASAP1
IRF2BP2
TMED7-TICAM2
TMED7
HEMGN
NXF1
KCTD18
ARL17A
MCL1
PDCD5
ZNF124
LRRCC1
SPEF2
LPGAT1
NUDT3
XPR1
ATP2A2
DEPDC7
FUCA2
IRAK3
SLC7A1
SLC35G5
BANP
FAM207A
DNM1L
UBE2J2
SCNN1D
MUS81
CFL1
TRMT1L
SWT1
TIMM23B
PARG
CPOX
YBX1
LYST
GRK5
KAZALD1
LGALSL
FMO5
SLC16A2
ZNF337
UBE2B
CDKL3
RANBP2
SMAP2
R3HDM2
INHBC
CLK1
SREBF1
CD38
TYMSOS
TYMS
IDH2
CST3
SH3D19
MALL
TCL1A
KRTAP9-3
KRTAP9-2
INTS9
HMBOX1
STX18
PEX3
ADAT2
STX10
IER2
SPDYE6
LOC100289561
ARSG
PELI1
PER2
DOCK10
MYO18A
SLC16A6
PTDSS1
MTERF3
TRIM47
TIFA
MAGEF1
CFLAR
SLC25A36
ARHGAP31
MKI67
NDUFA6
CEP68
KANK1
MAP3K14
PCTP
FAM220A
DSE
RWDD3
GMNC
PKP4
CCDC148
HOXB9
STK32B
TSPYL4
NIBAN1
LRRC36
GBP2
RORB
PRKCH
LAMA2
GYS2
SEC13
KPNA1
TBC1D14
MFSD14C
EIF4A3
PAAF1
RABEP1
PSTK
AEN
RAD23B
GAPDH
TMEM65
TRIM39-RPP21
TRIM39
DYNC1LI1
PTS
TMEM17
FAM86B2
CXorf38
LOC100996750
KRTAP4-7
RAET1E
DDIT4L
STOML2
PIGO
COG1
MLEC
CD55
AP3M2
CITED2
ZDHHC7
TRIP12
FBXO36
HDDC2
CNP
SLC25A4
SULT1B1
MYO5A
TWSG1
STEAP3
MIB1
PLAAT1
MORC4
PSD3
ZFP42
IDO1
SLCO6A1
WAPL
H2BC14
H2AC14
SOD2
WTAP
MACROH2A1
TXNDC15
TMEM229B
ELAC1
H3C10
H2BC13
H2AC13
KDF1
YPEL2
IQSEC3
INTS6
POLR2D
C9orf85
ABHD17B
TMEM251
MOAP1
VPS35
NTAQ1
PTP4A1
SLURP1
GCSH
PLEKHH1
SCN8A
PRAMEF33
PRAMEF10
OTOP1
DBP
SERP1
EIF2A
GHITM
KDM3A
ZNF623
TBCD
ARHGAP32
JOSD1
GTPBP1
RPL30
APBB1IP
RFX3
NOMO1
MIF
NEDD4
MAFF
ARHGAP29
KRT1
DPY19L2
MUC12
ANO2
DPH2
B4GALT2
ATP6V0B
AMMECR1L
ADAR
STK35
NUP50
RALY
APOLD1
CPT2
PXK
CDKN1B
OCIAD2
CA8
BAG3
KRTAP4-8
KRTAP4-11
KRTAP4-12
MPP7
PDCD4
SPOPL
PHF11
SLC12A5
SPX
ZNF80
CASR
TESK2
MMACHC
BOD1
COG2
C7orf25
TIMM23
KMT2E
DDX42
CCDC47
TEX9
RFX7
SMIM19
SLC20A2
CEBPG
MTUS1
TAB2
REEP3
TDRD7
ZBTB34
ADI1
KLHL9
PITPNC1
DDX17
BACH1
UNC79
BTBD7
CMTM7
OR2A7
NKIRAS1
EIF2D
TMEM109
PRPF19
EXO1
TRIP6
SRRT
TOMM34
STK4
ERI1
CUL7
NFYC
CENPS-CORT
CENPS
PRDM2
BLCAP
AXL
ARHGAP42
NNAT
RNF32
NR1D2
PARD6B
BCAP29
STRIP2
GNPNAT1
EFR3A
OAT
TLK2
PANK1
TMEM132A
MAGI3
PATJ
NANOS1