ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
FRG2
UNC45B
COL23A1
FANK1
PHB
KLHDC4
CCDC200
TTLL12
POTEH
PMAIP1
SUPT6H
SDF2
CBX1
LMLN2
SCGB1C2
SCGB1C1
ZNF264
MUC3A
NARF
CYBC1
CANT1
EEF1A1
MRPS7
GGA3
PDXDC1
NDFIP1
H3-3B
FAM117A
ATAD2
FH
CACUL1
TCF7L2
MPZL1
PHC2
ZSCAN25
SHOC2
BBIP1
TMEM71
PHF20L1
CYC1
BAG3
MTRNR2L8
AHI1
UBALD2
TRIM48
OXLD1
CCDC137
NBPF1
STX12
RPL38
ZFP91
LPXN
USP10
NOTCH2NLC
FRG1
NOTCH2
LEMD3
TRAP1
GRB2
WASHC5
NSMCE2
ABRAXAS2
DDX17
SLF2
CTAGE8
CTAGE4
ACSL3
KIAA1549
PDCD6
SMC3
REPS1
ZNF12
TRMT1
NACC1
CCDC30
ZMYND12
PPCS
THOC3
SMNDC1
UROS
BCCIP
DNAJB12
DHX35
FBRS
PAXBP1
TNFAIP8
ATG16L1
LOC100289561
PDE4DIP
SMAP2
NME2
CHORDC1
EXOSC2
ABCD3
EIF3F
WDR43
MUC1
CSNK2A2
ZNF717
SURF4
ZKSCAN1
VKORC1L1
PCOTH
MIPEP
ICE1
UBR5
MTRNR2L2
MSH3
DHFR
TACO1
DPP9
C8orf76
EXOC6
ZNF652
ATL2
IMMP2L
SPAG9
FBXO11
PLEKHA1
SEC61G
C10orf88
EPN1
MCMBP
MTMR4
NDUFAF6
CCDC186
SPATS2L
MTX2
PIGF
CRIPT
TEX10
BICD2
ZNF718
ZNF595
PPA1
C15orf40
C7orf25
ABCA5
PKD1
LRRC47
PRKACB
SERF1B
SERF1A
CPT1B
CHKB
ABL1
POMZP3
KLF5
MSANTD4
EFR3A
FBF1
USP7
TSPAN10
NPLOC4
MTHFD2L
RMDN1
TEPSIN
NDUFAF8
NOTCH2NLB
NOTCH2NLA
RPS15A
CLK1
KRTAP4-8
GLI4
PANK2
SAMHD1
KRTAP4-11
SMAD5
ZNF326
TADA1
SEPTIN9
DECR1
ARHGAP11A-SCG5
ARHGAP11A
BSPRY
ARHGAP39
HIPK1
EIF2AK3
WASHC1
ACADSB
ARHGAP29
CEBPG
IKZF5
IREB2
PREP
ASPH
ZMYM3
E2F3
EIF3A
PRIM2
ZDHHC6
VTI1A
TAF10
MSRB2
ALAS1
PKD2
ST14
SEC22B
WNT16
LATS1
RDH14
DSCC1
RBM42
MTDH
MPP7
POM121C
C8orf33
PLEKHA3
FKBP7
ECE1
ETNK1
GAN
CACTIN
VOPP1
PIK3CA
DYRK3
GPI
MYO5C
JMJD1C
COPG2
ADAR
NCBP2AS2
NCBP2
LSM6
C16orf87
REXO2
RPL13
PDCD4
RWDD2B
FNBP1
SUMO2
KRCC1
WAPL
RNASEH2C
MTRNR2L1
FAM13B
BFSP1
SEC62
PDXK
PDP1
DSTN
TM2D2
ADAM9
COL4A4
COL4A3
GTF2A1L
PIGC
SCYL3
OAT
SIN3B
CLTCL1
TMX4
SMARCE1
PIP4P1
CCZ1
FAM234B
GSTO1
FBXO31
SLC45A4
POMP
CCDC138
RBM22
ARF6
CBX2
SEC11C
MRPL20
VAMP3
SAFB
SAFB2
FAM169A
RECK
MEIS3
TMBIM4
PFKM
MRTFA
SENP1
SLC38A2
SBF1
TMEM139
CASP2
USP36
PARP8
ETS2
ACOX3
TRMT44
SMARCD2
ZCCHC8
NDUFAB1
RBPMS
RALGAPB
YTHDF1
EHD4
DYNLL2
TPT1
MICU3
MYBL1
ESCO2
CCDC25
MYD88
ACAA1
GSK3A
ELOB
PLA2R1
DGKZ
PREPL
CAMKMT
LEMD2
CRLS1
PHAX
TESK1
DUSP5
WAC
FERMT1
NPC1
GPS2
ZNF706
PAWR
PLEKHF2
FAM124A
ZNF623
TIGD2
GFI1B
TSC1
MKRN1
PRDM4
SEC22C
MYLK4
SS18L2
WRNIP1
TMEM131L
RAB4A
IGSF3
DNMBP
PIAS4
RFT1
USP33
TMEM245
CALCOCO2
LRCH3
METTL23
JMJD6
RGS22
KDM1A
TEX46
FAM83D
OXR1
GJB2
FLYWCH1
CLTA
ARL8A
DENND10
ATP8B1
SDR42E1
EFHB
RAB5A
OSBPL5
DCUN1D2
INTS8
ADIPOR1
HGS
ARL16
HPS6
ELOVL7
TMOD3
SLC25A37
TBC1D31
YPEL2
RAB11B
TBL2
HMHB1
RUVBL1
RPL7A
MED22
RAB18
EEFSEC
HERC3
MEST
SOCS5
WWP1
UTP18
MBTD1
UBE3A
UHRF2
ATP2A2
ANKLE2
RAPGEF5
EXT1
ANAPC7
ZNF775
ACVR1B
MCL1
FEM1C
PRELID3B
RFC4
PAG1
PRDM2
RCN2
ARSB
SCN8A
ABI1
ZBTB10
P4HB
PCNX2
DOCK5
AKIRIN1
SRSF5
C2CD2L
MCAT
TSPAN3
C11orf97
KRT19
PM20D2
OCIAD2
FBXO33
FANCA
NF1
UBE2G2
TMEM160
EGFR
COBL
LBR
ANGEL1
ANKRD18B
ANTXR2
TAF5
PEX7
RB1
RP9
MFSD12
RNF169
CTNNAL1
DOCK1
ACTL8
SPG11
TBPL1
KIAA1586
HMGCR
SLC25A28
RC3H2
PARP6
RAB5B
TERF2
CTAGE6
ANAPC11
ALYREF
VIPAS39
AHSA1
HSP90AA1
RC3H1
PELI1
NSF
AGO2
SLC38A10
TMEM175
GAK
EPS8
CYREN
COX18
UBN2
PLGRKT
TRAPPC3
SUFU
ACTR1A
RPS27A
CLHC1
TIMM23
MARCHF6
TBC1D30
GMCL1
ELOVL5
PDPK1
MAP7D1
PSME1
GNS
FITM1
LSM11
ZFYVE27
FARP2
DYRK1A
LPGAT1
FADD
USP43
CDC25A
HNRNPM
APPBP2
PALM2AKAP2
RPS20
PRPSAP1
ANKRD46
NUDT4B
NUDT4
MRPL38
VPS13C
NFATC2IP
FDX1
BMT2
RRAS2
NAMPT
MAPK9
ALDH4A1
URB1
CDR2L
FRMD5
HNRNPAB
UBN1
GLYR1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CRKL
ARID2
HEBP2
UBE2Z
RAB6A
NEDD1
URGCP
LRPPRC
BZW1
XPA
E2F6
DENND1A
TOB1
PGAM5
MAP3K3
URGCP-MRPS24
YWHAH
PDIA5
SMARCB1
ILKAP
CNKSR3
ITPRIP
GPN2
ARL5A
ARFGEF1
GOLGA7
DENND2B
SSRP1
P2RX3
TMEM131
ZNF607
OST4
PPP1CB
SART1
NT5C3A
CPT2
UBE2S
P2RX4
NHLRC2
DCLRE1A
SIRT7
PCDHB15
PARK7
VPS26C
APEH
ABHD10
SPATA5L1
GATM
MAP1LC3B
MIS18A
GPRIN1
XPNPEP1
PLCG2
CD81
GPC1
STAT3
ATP1A1
EPB41
CLTC
AGK
PNPO
YWHAZ
RNF145
SMAD1
GPX1
FAM86B1
ITM2B
LRRC58
SPATA6L
PLPP6
TM9SF3
MATN2
TYRO3
KRTAP4-12
TMEM202
LRRC37A3
EEF1AKMT2
ACSF3
SMAD3
SYT1
ANK2
STK3
NUDCD1
AGTPBP1
HSPH1
MAPKAPK5
CENPC
MGRN1
FZD6
DNPH1
CXCL1
HEXB
CYTH1
MORC4
DOCK9
STIP1
CRELD1
SINHCAF
RALYL
MKI67
KLK2
LRGUK
POLE4
RTN4
CTNNB1
LRRC59
DYNLRB2
OSBPL8
RNF168
SYBU
USP6NL
FCHO2
EFCAB14
NT5C2
RABL6
DNAJC1
NSD2
DCAF12
CLYBL
HASPIN
SEMA4D
CLSTN1
MICOS10-NBL1
MICOS10
KRT10
TMCO4
KLHL20
SOD2
WTAP
STX1A
PHB2
SCARB1
CISD3
GTSE1
ANKRD28
PSTPIP2
C10orf95
ZCCHC14
MARK2
NOP9
MTMR12
DHRS1
COPRS
RPL7
RDH10
VRK1
KIRREL1
ZNF577
TGFBR2
MIF
SRPRB
CXCL2
STAMBPL1
FUCA2
HNRNPU
FBXL13
ARMC10
EIF3B
FAM53B
EXT2
ZC3H4
PGM2
MTAP
ERO1A
OTUB1
PDCD5
CCNJ
SDHA
CCDC127
CHL1
SNX16
MTR
TRAM1
UBQLN1
PTPRF
DGKH
TSPAN14
ARPC1A
C9orf85
ABHD17B
PTBP3
RNASEH1
RRS1
ADHFE1
STPG1
NIPAL3
SRSF2
MFSD11
NELFCD
MIEF1
RHOC
HIPK3
STX17
GALNT12
AP3D1
FAHD2A
HMGB1
NFAT5
PTPN4
DOCK7
PLEKHG1
COX6C
PINK1
SLC26A6
C22orf39
PPP6R2
TPMT
KDM1B
COP1
KLHL5
NDUFV3
C1GALT1C1L
IQCF2
CCDC88A
MRPS36
RPL22
ADPGK
CTPS1
UNKL
CNN3
TPD52
HSPA4
TMEM51
PTP4A2
DBNDD1
H2AZ1
DNAJB14
CNNM2
MSH6
SOCS3
SLK
TICRR
GAS8
ERRFI1
FAM110C
SH3BP5L
KDM3B
FOXJ3
PISD
TBC1D5
HDAC1
PLA2G2A
NANOGP8
CDK11B
CDK11A
HACD2
MARCHF8
EYA1
DEF8
NDUFS6
MRPL36
C2orf69
PROSER1
NHLRC3
PANK1
RPL14
ZC3H7A
MTFMT
FAM91A1
SBK1
DUT
SCD5
TTBK2
ENTPD7
ARHGEF35
DUSP6
KLHL41
SCAND1
NLE1
NT5DC1
FBXW8
B9D1
B4GALT4
C1QBP
FAM104A
EMC8
COX4I1
EIF4H
COA8
BAG5
EXOSC10
C17orf80
SCRN3
CIR1
OTULIN
MLYCD
CSNK2A1
CDCA7
PSMG4
RBM12
CPNE1
ODF2
MRPL52
STMND1
UVRAG
CCDC178
POPDC3
DSTYK
ABLIM1
ARL17B
PDCD2
C6orf226
NUS1
PRRC2B
SPG7
MAGEF1
EIF2S2
YES1
FBXO42
UBFD1
EARS2
CAPN2
POLR2D
PI4K2B
RAD23B
PIGN
BPHL
PRPF19
STX3
OSBP
RAB2A
FEZ2
TANC2
H2AX
TSNAXIP1
RANBP10
TEAD1
SLCO4A1
LGALS3
DPYS
ELK3
TADA2B
CCDC96
CD9
SH3GL2
CYP2A13
MRPL30
MITD1
GATAD1
WASHC2C
PSMD1
TOMM34
DTD2
PPP1R9B
SPOPL
IWS1
RCL1
MEF2D
MPP5
NCOA2
RHNO1
FOXM1
ROCK2
POMT2
GSTZ1
DHRS11
UAP1
SLC12A5
PDZD8
PLBD2
SERINC2
SLC25A31
HSPE1-MOB4
HSPE1
HSPD1
PLEKHM1
PKIG
USP1
RANGAP1
RNF139
SCN11A
WDR48
CPOX
TRIB1
DLG4
ACADVL
AEBP2
TBXAS1
GFPT1
HIPK2
RAI1
SLC25A25
UBALD1
STIMATE-MUSTN1
STIMATE
SOHLH2
ERI3
UBAC1
SRP72
ARHGAP17
ARNTL2
TGFB3
NAIF1
IFT43
CHD5
MS4A1
TMEM106B
CELF1
SLC35A5
DERA
GPT2
TMEM183A
BIN3
WIPI2
FAM122A
DLG1
STRN
NANP
GSKIP
ATG2B
RBM26
KLHL9
KDF1
DCTN1
CUX1
JPT1
NAF1
COG6
ARHGEF3
DAP
SMC4
IFT80
FAAP100
SMIM43
RHPN1
CCNY
NEK7
HECTD3
NBEA
CHIC2
RBM17
KCTD9
CDCA2
IGF2R
MBNL1
RTRAF
ARF1
IDE
FAM204A
STRIP1
CERS6
UBE2D1
DDT
MIF4GD
TAF9
RAD17
AK6
PEX2
PATJ
PLEKHO2
EIF5
FKBP4
MNT
LDLRAP1
SLC38A9
SLC35F2
DFFB
CEP104
RNF19A
TBC1D14
THAP12
GVQW3
CYRIB
SDCBP
EZR
FAM135A
CCT2
SYNJ1
ZNF704
MXD1
PPP4C
GKAP1
FAM177A1
SRPK1
PPM1D
ACTR5
STX7
HSD17B1
ITGA3
SETD7
PEA15
SH3D21
PTS
SH3PXD2B
IRAK2