ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FANK1
KLHDC4
CCDC200
TTLL12
POTEH
PMAIP1
CBX1
ZNF264
CANT1
EEF1A1
MRPS7
GGA3
PDXDC1
NDFIP1
H3-3B
FAM117A
ATAD2
FH
CACUL1
MPZL1
PHC2
ZSCAN25
SHOC2
BBIP1
TMEM71
PHF20L1
CYC1
BAG3
MTRNR2L8
AHI1
UBALD2
OXLD1
CCDC137
NBPF1
STX12
RPL38
ZFP91
USP10
NOTCH2NLC
FRG1
NOTCH2
LEMD3
TRAP1
GRB2
WASHC5
NSMCE2
ABRAXAS2
DDX17
SLF2
TCF7L2
ACSL3
CTAGE8
CTAGE4
KIAA1549
PDCD6
SMC3
REPS1
ZNF12
CCDC30
ZMYND12
PPCS
NACC1
THOC3
SMNDC1
UROS
BCCIP
DNAJB12
DHX35
FBRS
PAXBP1
ATG16L1
TNFAIP8
LOC100289561
PDE4DIP
NME2
SMAP2
ABCD3
CHORDC1
EIF3F
WDR43
CSNK2A2
SURF4
ZNF717
ZKSCAN1
VKORC1L1
PCOTH
MIPEP
ICE1
UBR5
MTRNR2L2
TACO1
DPP9
C8orf76
EXOC6
ZNF652
ATL2
IMMP2L
SPAG9
FBXO11
PLEKHA1
SEC61G
C10orf88
MCMBP
MTMR4
NDUFAF6
CCDC186
SPATS2L
MTX2
PIGF
CRIPT
TEX10
BICD2
ZNF718
PPA1
ZNF595
C15orf40
C7orf25
PKD1
LRRC47
PRKACB
ABCA5
SERF1B
SERF1A
CHKB
POMZP3
ABL1
KLF5
EFR3A
USP7
MSANTD4
TSPAN10
NPLOC4
MTHFD2L
RMDN1
TEPSIN
NDUFAF8
NOTCH2NLB
NOTCH2NLA
RPS15A
CLK1
GLI4
PANK2
SAMHD1
KRTAP4-8
KRTAP4-11
SMAD5
ZNF326
TADA1
SEPTIN9
ARHGAP11A-SCG5
ARHGAP11A
DECR1
BSPRY
ARHGAP39
HIPK1
EIF2AK3
ARHGAP29
WASHC1
CEBPG
IKZF5
ACADSB
IREB2
PREP
ASPH
E2F3
ZMYM3
EIF3A
ZDHHC6
VTI1A
TAF10
MSRB2
ALAS1
PKD2
ST14
WNT16
LATS1
RDH14
DSCC1
RBM42
MPP7
MTDH
POM121C
C8orf33
PLEKHA3
ECE1
ETNK1
GAN
CACTIN
PIK3CA
DYRK3
VOPP1
GPI
MYO5C
JMJD1C
COPG2
ADAR
NCBP2AS2
NCBP2
LSM6
C16orf87
REXO2
PDCD4
RPL13
RWDD2B
SUMO2
KRCC1
FNBP1
WAPL
RNASEH2C
SEC62
PDP1
BFSP1
PDXK
FAM13B
DSTN
TM2D2
ADAM9
COL4A4
COL4A3
PIGC
SCYL3
OAT
SIN3B
CLTCL1
TMX4
SMARCE1
PIP4P1
CCZ1
GSTO1
FAM234B
SLC45A4
POMP
FBXO31
CCDC138
RBM22
ARF6
CBX2
SEC11C
VAMP3
SAFB
SAFB2
FAM169A
MRPL20
RECK
MEIS3
SENP1
PFKM
SLC38A2
MRTFA
CASP2
USP36
PARP8
ETS2
SBF1
ACOX3
TRMT44
SMARCD2
ZCCHC8
NDUFAB1
RALGAPB
YTHDF1
DYNLL2
EHD4
TPT1
MICU3
RBPMS
MYBL1
CCDC25
GSK3A
ELOB
PLA2R1
ACAA1
DGKZ
PREPL
CAMKMT
LEMD2
CRLS1
PHAX
TESK1
WAC
FERMT1
NPC1
GPS2
ZNF706
PAWR
PLEKHF2
DUSP5
FAM124A
ZNF623
TSC1
MKRN1
SEC22C
SS18L2
PRDM4
WRNIP1
TIGD2
RAB4A
TMEM131L
IGSF3
PIAS4
USP33
TMEM245
DNMBP
CALCOCO2
RFT1
LRCH3
METTL23
JMJD6
RGS22
KDM1A
FAM83D
OXR1
CLTA
ARL8A
FLYWCH1
DENND10
ATP8B1
GJB2
RAB5A
EFHB
INTS8
ADIPOR1
HGS
ARL16
HPS6
ELOVL7
TMOD3
TBC1D31
SLC25A37
DCUN1D2
RAB11B
TBL2
SDR42E1
OSBPL5
YPEL2
RUVBL1
RAB18
EEFSEC
HERC3
MEST
SOCS5
WWP1
UTP18
MBTD1
UHRF2
ATP2A2
UBE3A
RAPGEF5
ANAPC7
ZNF775
RPL7A
MED22
EXT1
MCL1
ACVR1B
FEM1C
PRELID3B
PAG1
RCN2
ARSB
SCN8A
ABI1
ZBTB10
PCNX2
PRDM2
P4HB
DOCK5
MCAT
C11orf97
AKIRIN1
PM20D2
FBXO33
TSPAN3
FANCA
NF1
UBE2G2
OCIAD2
TMEM160
C2CD2L
EGFR
COBL
KRT19
ANGEL1
ANKRD18B
ANTXR2
TAF5
PEX7
RB1
RP9
RNF169
MFSD12
CTNNAL1
DOCK1
ACTL8
SPG11
KIAA1586
TBPL1
HMGCR
SLC25A28
RC3H2
PARP6
RAB5B
TERF2
ANAPC11
ALYREF
VIPAS39
AHSA1
RC3H1
PELI1
NSF
TMEM175
GAK
HSP90AA1
SLC38A10
CTAGE6
EPS8
CYREN
COX18
TRAPPC3
RPS27A
CLHC1
TIMM23
SUFU
GMCL1
UBN2
MARCHF6
TBC1D30
ELOVL5
MAP7D1
GNS
PSME1
PDPK1
LSM11
ZFYVE27
FARP2
LPGAT1
FADD
CDC25A
USP43
HNRNPM
APPBP2
PALM2AKAP2
DYRK1A
RPS20
PRPSAP1
ANKRD46
MRPL38
NUDT4
NUDT4B
VPS13C
FDX1
BMT2
RRAS2
NAMPT
ALDH4A1
FRMD5
NFATC2IP
HNRNPAB
URB1
CDR2L
MAPK9
UBN1
GLYR1
CRKL
UBE2Z
RAB6A
NEDD1
URGCP
LRPPRC
BZW1
XPA
E2F6
PGAM5
TOB1
HEBP2
DENND1A
MAP3K3
YWHAH
URGCP-MRPS24
ILKAP
SMARCB1
PDIA5
GPN2
ARL5A
ARFGEF1
TMEM131
ZNF607
ITPRIP
CNKSR3
PPP1CB
SART1
NT5C3A
OST4
SSRP1
GOLGA7
CPT2
UBE2S
P2RX4
DENND2B
NHLRC2
DCLRE1A
SIRT7
PARK7
VPS26C
APEH
ABHD10
SPATA5L1
GATM
MIS18A
XPNPEP1
MAP1LC3B
PLCG2
GPRIN1
GPC1
CD81
STAT3
ATP1A1
CLTC
AGK
PNPO
RNF145
FAM86B1
LRRC58
GPX1
ITM2B
PLPP6
EPB41
TM9SF3
SMAD1
YWHAZ
SPATA6L
MATN2
TYRO3
KRTAP4-12
EEF1AKMT2
LRRC37A3
SYT1
ACSF3
ANK2
NUDCD1
SMAD3
HSPH1
CENPC
MAPKAPK5
MGRN1
STK3
CXCL1
HEXB
DNPH1
CRELD1
STIP1
SINHCAF
CYTH1
FZD6
AGTPBP1
RALYL
MKI67
DOCK9
MORC4
POLE4
CTNNB1
LRRC59
DYNLRB2
OSBPL8
RTN4
USP6NL
EFCAB14
DNAJC1
FCHO2
DCAF12
RNF168
HASPIN
SYBU
CLYBL
MICOS10-NBL1
MICOS10
NT5C2
NSD2
SEMA4D
CLSTN1
TMCO4
KLHL20
SOD2
WTAP
PHB2
SCARB1
CISD3
GTSE1
ANKRD28
PSTPIP2
ZCCHC14
MARK2
C10orf95
MTMR12
COPRS
RPL7
RDH10
VRK1
NOP9
DHRS1
KIRREL1
STX1A
TGFBR2
SRPRB
CXCL2
STAMBPL1
MIF
HNRNPU
FBXL13
ARMC10
FUCA2
EIF3B
FAM53B
EXT2
PGM2
MTAP
ERO1A
ZNF577
OTUB1
PDCD5
ZC3H4
CCNJ
SDHA
CCDC127
SNX16
MTR
TRAM1
UBQLN1
C9orf85
ABHD17B
RNASEH1
TSPAN14
STPG1
NIPAL3
SRSF2
MFSD11
NELFCD
RRS1
ARPC1A
HIPK3
PTBP3
STX17
GALNT12
MIEF1
DGKH
RHOC
FAHD2A
AP3D1
PTPRF
HMGB1
PTPN4
NFAT5
DOCK7
PLEKHG1
COX6C
SLC26A6
C22orf39
TPMT
KDM1B
PPP6R2
COP1
NDUFV3
PINK1
KLHL5
CCDC88A
RPL22
ADPGK
UNKL
CNN3
CTPS1
DBNDD1
PTP4A2
TPD52
MSH6
HSPA4
CNNM2
DNAJB14
SLK
SOCS3
TICRR
GAS8
ERRFI1
FAM110C
KDM3B
FOXJ3
HDAC1
CDK11B
CDK11A
EYA1
MARCHF8
MRPL36
HACD2
DEF8
C2orf69
PISD
PROSER1
NHLRC3
TBC1D5
PANK1
ZC3H7A
SBK1
DUT
FAM91A1
RPL14
TTBK2
ENTPD7
MTFMT
ARHGEF35
SCD5
DUSP6
SCAND1
NLE1
FBXW8
B9D1
NT5DC1
C1QBP
EMC8
COX4I1
EIF4H
EXOSC10
B4GALT4
SCRN3
CIR1
OTULIN
MLYCD
CSNK2A1
CDCA7
PSMG4
FAM104A
C17orf80
RBM12
CPNE1
ODF2
COA8
BAG5
MRPL52
STMND1
CCDC178
POPDC3
UVRAG
DSTYK
ABLIM1
PDCD2
NUS1
PRRC2B
C6orf226
EIF2S2
YES1
FBXO42
UBFD1
EARS2
MAGEF1
POLR2D
PI4K2B
RAD23B
PIGN
BPHL
OSBP
RAB2A
PRPF19
H2AX
FEZ2
TSNAXIP1
RANBP10
TANC2
TEAD1
CAPN2
SLCO4A1
DPYS
SPG7
STX3
TADA2B
CCDC96
SH3GL2
ELK3
LGALS3
CD9
WASHC2C
DTD2
SPOPL
PSMD1
IWS1
TOMM34
MPP5
PPP1R9B
RHNO1
FOXM1
NCOA2
ROCK2
GATAD1
POMT2
GSTZ1
UAP1
RCL1
SLC12A5
PLBD2
DHRS11
MEF2D
PDZD8
SERINC2
SLC25A31
HSPE1-MOB4
HSPE1
HSPD1
PLEKHM1
PKIG
USP1
RANGAP1
SCN11A
WDR48
CPOX
RNF139
AEBP2
TBXAS1
GFPT1
DLG4
HIPK2
TRIB1
ACADVL
STIMATE-MUSTN1
STIMATE
ERI3
RAI1
UBAC1
SRP72
ARNTL2
UBALD1
ARHGAP17
SLC25A25
NAIF1
IFT43
SOHLH2
CHD5
TMEM106B
CELF1
DERA
GPT2
TMEM183A
FAM122A
DLG1
NANP
STRN
ATG2B
BIN3
RBM26
KLHL9
WIPI2
GSKIP
DCTN1
JPT1
NAF1
COG6
CUX1
ARHGEF3
SMC4
FAAP100
DAP
KDF1
SMIM43
RHPN1
NEK7
NBEA
HECTD3
KCTD9
CDCA2
MBNL1
RTRAF
CHIC2
RBM17
IDE
CCNY
STRIP1
UBE2D1
DDT
MIF4GD
TAF9
RAD17
AK6
PEX2
PLEKHO2
IGF2R
EIF5
CERS6
FKBP4
MNT
ARF1
PATJ
LDLRAP1
FAM204A
SLC35F2
DFFB
CEP104
RNF19A
TBC1D14
THAP12
GVQW3
CYRIB
SDCBP
EZR
FAM135A
CCT2
SYNJ1
ZNF704
MXD1
PPP4C
GKAP1
FAM177A1
PPM1D
ACTR5
STX7
PEA15
SRPK1
SH3D21
SETD7
ITGA3
PTS
SH3PXD2B
RNF220
TOMM22
TNPO1
MRPL12
ATRN
TBCCD1
DDHD2
ZBTB4
NOCT
GXYLT1
PPP2CA
EHBP1
SREBF1
TKFC
DDB1
YTHDF3
MAP4K3
TJP2
SEPTIN11
HLF
HMGN2
TNFSF9
DBNL
CSTB
IRAK2
RPL8
FAM207A
PPRC1
EIF5B
PPA2
CCDC126
SCAF8
KCTD6
VCPIP1
C8orf44-SGK3
GHITM
KIAA1958
C9orf147
MSANTD3
DDX21
NCOA1
SLC49A4
LINS1
ASB7
CHAMP1
ZNF134
ZBTB38
PDIA6
SNRNP48
KLC2
WDR4
TMEM251
MOAP1
BLOC1S2
TMEM231
CDC42EP4
MYL5
ATP5ME
ZNF800
POLR1D
LNX2
RNMT
FAM210A
LAMTOR1
OSMR
PRDX6
NAPB
EEPD1
AFAP1
SLX4
LOC389199
CDKN1B
KRTAP2-3
TRUB2
COQ4
SPATA7
RPL10A
KLHL22
FAIM
GALNT10
ICE2
UBLCP1
SUN1