ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1098750 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◣ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

RGPD2
RGPD1
MTRNR2L2
MTRNR2L8
MTRNR2L9
SNX16
MTRNR2L10
KNL1
PRCC
SELENOT
SLC35E2A
SLC35E2B
SETD2
FOS
CNOT4
POR
CDCA7L
ZNF219
INO80D
IQCH
AAGAB
CENPN
PAXIP1
PARK7
NOL8
CENPP
ZC3H7B
RANGAP1
CNOT6
YY1AP1
DAP3
MED26
ATG101
C21orf91
MARK2
POLG
TIGD5
EEF1D
HDAC2
PTDSS1
MTERF3
AKIRIN1
PIK3R3
TARDBP
H4C11
RPN2
MROH8
DLST
SOD2
DNMT1
KCNAB2
UROS
BCCIP
TCP11L2
MYO9B
HAUS8
DOHH
MYL12B
FLCN
FRAT1
ANKRD13A
ZMYND11
RHBDD3
EWSR1
SNAP29
PI4KA
PSIP1
UIMC1
FRAT2
FBXO33
KDELR1
NOCT
EIF4A1
PRKDC
MCM4
SS18
PPIB
ATF4
H4C12
CDC25C
EED
LUC7L2
CENPE
PKNOX1
BCL6
FAM53C
PRDX2
PPP1R10
MRPS18B
UBE2B
CDKL3
S100A13
CHTOP
UFD1
CDC45
FBXW4
H4C5
SRI
SELENOW
PRKCI
PCBP2
DPP9
HYAL2
FMC1-LUC7L2
FMC1
FKBP3
DGAT2
PFDN4
MYL12A
EEF1A1
HEXIM2
GPR108
ZNF639
CDON
PRMT1
TMEM260
FAM227A
CBY1
GMNN
PNN
H1-2
USP15
H2BC18
H3-3B
TAF15
LRPPRC
RNASEK
PHRF1
H3C13
SLTM
NDUFB1
CPSF2
MIA2
PTOV1
EIF3B
UQCRQ
GDF9
CDIPT
H4C14
CD164
RAB28
RPS29
TADA3
ARPC4-TTLL3
ARPC4
HSP90AB1
COMMD6
GNB2
H1-4
EBF1
UQCRC2
PSMD3
STK35
NDST2
ASAH1
NOP56
FUS
TJP2
BAG2
PRDM10
PPP5D1
CALM3
H2BC21
H2AC20
TMSB10
RITA1
DDX54
WRAP53
TP53
UFSP2
PPP1R13L
POLR1G
MAT2A
PMVK
CHMP3
AFF1
ARL6IP6
RPL22
OXR1
ASH1L
PABPC4
ATF7-NPFF
ATF7
WASF2
UCHL3
RPL11
ZNF335
ALDH4A1
TACC1
PRPF40A
UBE2L3
CSNK2A1
MBLAC1
C6orf226
UTP18
MBTD1
H2BC5
WDR74
TSPAN4
POLR2L
CACNA1F
UBAP2L
C1orf43
MRPS24
RPL19
AKT1S1
WASL
CDK16
BZW2
ANKMY2
OGA
FAM110A
UBA1
RPL41
NR6A1
GALNT10
PDXDC1
TRA2B
DUT
RPLP1
PKIA
CELSR3
INTS2
PTCD2
MRPS27
UQCRH
LRRC41
SMC3
TBC1D17
RPL35
ARPC5L
ZNF300
NDFIP1
H4C3
H2AC21
KCMF1
H4C15
UPF1
RPL13A
RALY
SYVN1
ZBTB4
FRMD6
DOT1L
RMND5A
RBBP6
H4C4
TPBG
ATG16L2
KDM3B
H3C2
NSD3
POLR2A
RCC1
ZFAND3
ZDHHC5
MORF4L1
SRXN1
RAB11B
PIP4K2B
ANP32E
RNF103-CHMP3
EIF4A2
PTCD3
POLR1A
WTAP
MIA3
CCT5
LYRM1
DCUN1D3
ZBTB8OS
RBBP4
SLC3A2
CEBPB
H2BC4
H2AC6
DDX5
RPS20
RPS15A
GTF2A1
SERBP1
ATG2A
PRCP
CFAP77
ZNHIT2
MTMR14
PRR3
GNL1
RBM39
NIPBL
ID1
TBX3
OAZ1
PRMT2
DAZAP2
CUL2
HEXIM1
NFYC
HNRNPU
RAVER1
H3-3A
TOP2B
HHIPL1
CCDC85C
TRAPPC3
MAP7D1
H2BC15
H2AC15
H2BS1
ZDHHC2
MRPS11
MRPL46
ATPSCKMT
EIF4G2
NUDT4B
NUDT4
ARAF
TRA2A
BZW1
NFKBIZ
INAVA
SPATA17
GPATCH2
SRSF3
MTCH1
COPS5
COPZ1
MGRN1
STRIP2
LANCL2
ZC3H10
H3C15
H3C14
DUSP1
TNRC6B
HNRNPC
BRD2
H2BC11
H2AC11
ISG15
SRSF1
DDIAS
PRR19
PAFAH1B3
TST
MPST
LRCH4
FBXO24
ATP6V0C
HDAC1
MCM5
RPLP0
GDI2
UBE2J1
LIN54
PPP2CA
HECTD1
IFT52
SLBP
SETD5
FAM160B1
WDR26
PABPC1
TRAF7
H2BC12
H2AC12
MOCS3
DPM1
SREK1IP1
CWC27
HNRNPA3
SRCAP
LOC730183
LSM14A
NASP
HMGB2
H1-3
BTG1
BCLAF1
PPFIA3
FKBP5
C19orf73
RPL12
NOTCH2NLC
MCL1
SIRT4
ABHD16A
PRKAG2
PYGO2
LOC101928120
MAP3K20
ZC3H6
PSMD14
PCNT
C21orf58
HMGA1
LRSAM1
RPL28
NSMAF
TTLL7
SASH1
CSTB
RPL13
HNRNPUL1
UBE2A
MBNL1
CSNK1A1
CEP95
SMARCAL1
EFCAB2
ZFP91
LPXN
TMEM131
PHF8
NOTCH2NLB
NOTCH2NLA
PDIK1L
MAP2K4
TP53RK
NR2F2
H4C1
H3C1
H4C8
MDM2
LMNA
SIGMAR1
CSDE1
SYNCRIP
PSMA7
MIB2
PCIF1
RMND5B
PTP4A1
MIF
SLC38A2
SCAND1
H3C10
ASF1A
USP25
ITGB1
H2BC8
H2AC8
CTNNB1
LATS1
PTP4A2
H2BC17
H2AC17
FCHSD2
FHL2
SRSF6
MAML1
MTDH
H4C6
MFSD11
H2AC19
H2AC18
ZNFX1
LAMC1
LSG1
CRKL
AURKAIP1
PHC2
OARD1
ACTG1
C19orf48
FGF2
TUBB
FNBP4
ATP5F1B
VCL
NFYA
H4C9
SRSF7
DIAPH1
TUBA1B
RPS3
SYF2
POLR1B
SRSF2
PPM1L
KLF6
DCBLD2
CUL1
CITED2
H1-5
HSPB1
RPS12
ATAD2B
ZBTB37
IER5
ATP2A2
FUBP1
DNAJB4
RPS3A
PTPN9
H2AX
DDX17
ETS1
ZNF143
PPP1CB
FANCI
FTH1
EIF1
EGLN1
MARCHF7
KAT7
GADD45A
STXBP5
DCUN1D1
TPM4
PIF1
IRF2BP2
ACTR3C
GADD45B
UBTF
TANK
FBXO30
SOCS6
CAPZA2
VEGFA
SLC20A1
CLIC4
ATP8A1
LSR
IER5L
WEE1
SOCS5
RPL18A
TCF12
PPIA
PHLDB2
EEF2
H3C4
CEBPD
NOTCH2
ACTB
ZNF207
TNPO1
DDX19B
AARS1
TBCC
HMGA2
RPL21
RRAS2
CNOT10
CYTH2
NRIP1
RBM22
GET3
TAF1D
PSPC1
MKLN1
DCP1B
C11orf54
UBC
NAA25
PPM1B
MTREX
GTF3C6
FSTL1
DHX29
ZC3H12C
HNRNPH1
PRRC2A
EGR1
MED13
POLR2M
PBLD
HNRNPH3
FBXO11
RPL15
ITPRIP
GRIPAP1
SCYL1
H2AZ1
SMC4
ANKRD17
BAG3
TNPO3
CREM
PTPA
CRAT
LRRC61
ACAT2
SPATA9
RHOBTB3
IDI1
GABPB2
CCNL1
GALNT2
DCAF8
PIK3CA
EPHB2
RTN4
PLXNA2
WDR37
DYNC1LI1
HDLBP
BICRAL
RPS27
RPS23
FBXO28
ATP6AP1L
SLC25A3
FOSL1
TMSB4X
RPL10A
CDV3
H2AC16
ANKRD12
CALM2
MYL6
RPSA
MATR3
HMGB1
CEP350
PPP1R15A
PAK2
RDX
ATP5PD
DYNLT1
RPL3
ZFHX3
PPP3CC
KMT2E
JUN
HINT1
MSL2
PDE4DIP
JUND
C16orf87
KLF7
TIMM17B
PQBP1
EIF2S2
HNRNPA0
SYPL1
APTX
ACYP2
ZFP14
PPP4R3B
HNRNPM
MAP4K4
HIF1A
CPEB2
SFPQ
HEXB
SOCS3
SUPT4H1
ACSL3
RPL22L1
ZNF319
USB1
DCAF5
DDIT4
RNF146
CTSB
MEPCE
H3C11
NMI
KDM2A
ARIH1
SEPTIN2
BAZ2B
SKP1
STK24
RPL10
PLEKHG5
MYOF
MMADHC
CUL3
AKIRIN2
RNF7
COQ10B
MADD
TPRA1
FAM156A
DYRK1A
MACIR
DDX39B
LMAN1
ZNF326
SYN1
ZC3H4
PEAK1
FAM120A
CDKN1B
CAPN2
HERC4
DNAJA1
ZCCHC3
RBM8A
CAPN7
SPCS3
TCERG1
GOLPH3
SPRY2
CRPPA
CCN1
H3C6
SUCO
MARK3
WDR82
ANKRD52
ESYT2
NFU1
HMG20A
TLE4
HOXB9
SENP6
SP3
RPL5
JMJD1C
RND3
PPP1R9B
ANO6
HMGN2
HNRNPUL2
COX18
ELL
TOP1
HNRNPK
CREB1
FTL
TCF4
ASPH
SLC25A25
NAIF1
SF3B4
DBP
PWWP2A
PLPP3
TSC22D1
RPL37A
H4C2
ZFAND5
ATP9B
GLUL
PCNA
ATP1B3
MAP4K5
CSKMT
C11orf98
ATL1
PRDX1
EP300
PPP2R5C
AHR
SRPK2
PPP2R5A
C1GALT1
APLP2
USP11
CDKN2C
C6orf62
RAC1
UBP1
TLK2
PFN1
CD24
S100A6
ADAMTS1
USP54
EIF5
RC3H1
PPP4R3A
NPC1
LEPROT
LEPR
RCC2
RPS2
HARBI1
ATG13
WHAMM
HDGFL3
WDFY2
ANKRD18B
NBN
PRRT1
PPT2
CTCF
ADAM9
H1-10
NFE2L2
TAF5
RORA
SBNO1
SPEN
SKI
EIF4EBP2
RNF217
NAA16
MTRF1
SELENOH
SERP1
EIF2A
RMI1
PMAIP1
ZNF253
TRIM24
SUPT5H
SRF
FBXL14
DDX6
CCN2
U2AF2
NRF1
DGCR2
CIRBP
MAP2K2
ATP5MF-PTCD1
ATP5MF
KMT5B
ERRFI1
CNOT3
SFT2D3
LMNB1
HNRNPLL
CCDC85B
B2M
NR1H2
KMT2D
HNRNPA1
CBX5
DNAJC14
KCTD3
VAPA
ZFP36L2
KLHL21
PCK2
NRL
GPATCH8
PDLIM5
ZFYVE9
LEMD2
PTPRJ
H2BC13
H2AC13
RPS9
SHB
RAB10
LHFPL2
CETN3
NARF
DTD2
ATP11B
DPF2
HP1BP3
OTP
BCL2L13
RPL8
NFKB1
SOD1
KANSL2
PIGV
DUSP6
YTHDC1
NT5E
CTNND1
RGL1
PTX3
ARPC5
HSPA8
DIS3L
ZWILCH
RPL4
XPO1
NCOR1
NPM1
DPYSL3
UHRF1BP1L
ABL1
RAD23B
ELL2
SF3B1
RPS6
PHLDA1
USP1
RFX8
MRPL51
HIPK3
EIF3A
KTN1
H2AJ
RPS7
SIRT1
NACA
MRFAP1
UHRF2
KNTC1
TMEM138
MKRN1
CYB561A3
UGDH
ZCWPW1
NFX1
RPS27L
RNF19A
TPM1
SSB
NSRP1
SMIM3
RAF1
MYLIP
PPP1R12A
RPL32
CEP85L
HCFC1
DIPK2A
ST7L
SCYL2
KIAA1586
DEPDC4
CAPZA1
TM2D2
NCL
ATXN2L
ZMIZ1
CNN3
RPS8
NUCKS1
FRYL
AGO2
MFSD14A
AMACR
ECI2
SLC1A5
PRRC2C
ITM2B
RGL2
CCDC71L
ANTXR2
USP3
RBM12
MPHOSPH10
MCEE
CPNE1
STK17A
KHDC4
DNAJB1
SRSF5
NECTIN3
LIN7A
WDR6
ZNF280D
RPS26
PDCD2
PCGF5
LUC7L3
IER3
FLOT1
AKT2
TWF1
E2F3
UBXN4
DOCK7
JUNB
ETS2
MANSC4
KLHL42
RPL14
SNTB2
PIGO
CDT1
TRIB1
RPL7A
PAIP2
MED22
FAM227B
DTWD1
H3-2
ATL2
PHF3
WDR1
ERBIN
TNKS
STK17B
ADNP
SIAH2
ERCC6L2
TPT1
RBPMS
GNAS
ANXA5
GNB1
SEPTIN11
RAB14
GSN
AMFR
SUMO2
ROCK1
DNM1L
DISP3
XRRA1
SPCS2
PSAT1
PRIMPOL
CREB3L2
CASP3
SERF2