ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD2
RGPD1
MTRNR2L9
WDR74
DYNLL1
EMILIN2
MTRNR2L10
H4C14
H4C12
H4C15
NGB
SCRIB
MTRNR2L6
MTRNR2L1
ZC3H10
RPL41
H2BC4
H2AC6
WASHC2A
MAMDC2
WASHC2C
LOC112694756
LAMP1
H4C11
H4C3
H1-6
C1orf198
SCML1
PAFAH2
POLDIP3
SIRT4
POLR2J3
PCNA
SKIDA1
TMEM107
MUC3A
FRA10AC1
HSPE1-MOB4
HSPE1
HSPD1
TRMT2A
RANBP1
GBA
MTF2
CASQ1
H4C4
IPO4
TEX9
RFX7
DNAJB4
SLC20A1
ATR
H4C8
SCGB1C2
SCGB1C1
AMDHD2
TRIM48
IRF9
INTS12
GSTCD
PHF23
DVL2
NCBP3
GSPT1
CALM1
TAP2
SCNM1
LYSMD1
NUF2
DAB1
OMA1
H4C9
YIPF2
TIMM29
CASP8AP2
TSR3
GNPTG
KRTAP21-2
KDM3B
TMEM216
LRRC37A3
H3C15
H3C14
H2AC19
H2AC18
SLC9A1
CDKN2AIPNL
MTERF1
ARMC7
MTRNR2L3
VPS33A
MDM2
POR
PIM1
VPS13D
AFF3
DRAP1
C11orf68
DPY19L4
NOTCH2NLC
NOTCH2
PTEN
KLLN
RHOT2
PMF1-BGLAP
PMF1
RBIS
COMMD9
ZCCHC4
GORASP2
ZSCAN30
NPAS4
GTF3C3
BNIP1
DENR
LRFN3
HS1BP3
TOR1AIP2
TOR1AIP1
RPS7
VOPP1
TDRD7
NOLC1
CCNC
ZMPSTE24
NCF4
RRM1
GNAI2
NME1
BBC3
ASB2
ADNP
HEXA
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
JUND
PRND
CLCN7
NUP54
SF3A3
MPDU1
LOC100996842
CD68
SLC35B1
AURKAIP1
MRPS23
TBL3
H4C2
H3C2
MAP1LC3B2
EXD1
CHP1
BCL3
STX16
COMMD2
PLEKHM3
LIME1
TSN
MARCHF8
DDX1
POLR3B
ACTR10
ZNF507
CTNNB1
LRRC59
SLC39A13
COMMD4
ABCA3
TCTN3
TVP23B
SLC38A7
AKAP11
CSPP1
COPS5
NDUFS7
MED23
MRPL44
SSBP1
RPL38
STAM2
FOXJ3
DHX33
PDE11A
RBM45
PTPN6
MRPS18C
HELQ
ALG10B
C12orf57
ARMH3
BAIAP2
SLC25A51
ATP5MC2
CDK5RAP1
BHLHE23
UBXN6
RABL2B
HASPIN
DENND4A
OR2L13
OR2AJ1
STX18
ERVH48-1
CACTIN
RBM28
POLR2J
PSMD3
NDUFA4L2
ZNF25
N4BP3
SMARCD2
STAT3
H4-16
H2AJ
LSM11
POLD3
ATP6V0D1
AGRP
GRAMD1C
NAGPA
DUX4
RBBP5
RABL2A
DGKZ
PRRG2
NOSIP
TLR5
BCL2
RHOF
XKR7
FAM227B
DTWD1
INTS1
TMEM147
STK17A
CSNK1D
RDH5
BLOC1S1
ITGA7
DSTYK
GTF2H2
CAB39
GRM4
SNX16
WASHC5
NSMCE2
RPL10A
NSUN4
SHISA5
SCAND1
EIF3F
ATG101
NCAPH2
LMF2
NUTM1
NOP10
POLG
MRPL24
TRAPPC3
DCK
NOXA1
TAF3
MAPK8IP3
IQCG
UGT8
RPL35A
TATDN3
NSL1
COPS7B
PDE6D
PHB2
NUP205
NOTCH2NLB
NOTCH2NLA
DCP1B
RPL21
ZBTB45
DIAPH1
TTC8
CYP1B1
TMEM242
R3HCC1
GLIPR1L2
MYNN
CDC37
ACTRT3
PLCD3
ACBD4
CERS2
ANXA9
GALK2
COPS2
SRRM3
TMEM115
TM9SF1
MLEC
RBM39
SPATA25
CTSA
NEURL2
ZNF341
UNK
SMPD4
MZT2B
COX16
SH3GL1
CHAF1A
BPTF
TRAPPC8
FFAR1
B4GALT7
SNX18
IER3
FLOT1
RBM17
UBQLN4
LAMTOR2
RAF1
MED27
DCAF10
TBC1D19
RWDD1
SLC17A7
GABPA
ATP5PF
PPP6R1
FRG1
IPO13
RPS20
MCOLN1
GANAB
VPS50
TIPIN
HEPACAM2
LPCAT3
MRPS31
STOML1
PML
TOR2A
APC2
JRK
COL9A2
USP3
SNAPC5
ILF2
HGFAC
H3C12
H2BC17
H2AC17
PNKD
AAMP
DCP1A
INO80C
RABGGTA
PLEK
HMGN2
TMEM127
CIAO1
CCDC200
MRPL1
TSNAX
PXK
FBXO28
PSMF1
STAT1
SRRT
CENPS-CORT
CENPS
ARHGEF12
PEX3
ADAT2
ARSG
STK16
GLB1L
PCID2
CUL4A
PSMC3IP
EIF2D
RAD54L
WDFY1
VTA1
NMBR
AP5B1
TSFM
RAD23A
SLC35E2B
UNC45B
FASTKD1
RSAD1
SKP2
LMBRD2
KAT5
ACTL10
ATG16L1
INKA2
DDX20
MEF2A
TOX4
RAB2B
FBXO5
SLC39A3
KRR1
LARP1
FIBP
FBXW5
C8G
TUBA1B
PPIF
CTSW
NFAT5
PSMG3
NRTN
SELENOH
IL21R
APOBEC3B
USP30
RBSN
ATAD5
VPS29
RAD9B
PRKDC
MCM4
ZFYVE26
RAD51B
TCHP
NMUR1
LZTFL1
AHCY
TOMM22
SLBP
PRDM1
SLC2A4
TPD52
DPP9
SLC33A1
NUDT17
TOP3B
EIF1B
PRKCE
PRDX1
SPATC1L
ZNF518A
BBS1
SNAP47
JMJD4
ZFYVE1
NR1H3
DHX8
DCLRE1B
AP4B1
SEC13
TUBB
SPNS1
GNB2
ACP2
RNPS1
H2BC8
H2AC8
ADAR
RPGR
RPL27
FAM228B
SF3B6
MOB4
ROM1
EML3
TAOK3
SUDS3
ANKRD46
SRSF7
MAD1L1
PAXBP1
MAZ
NCBP2AS2
NCBP2
SART1
FAM111A
NUDT1
MRM2
CCR1
E2F3
ZBTB40
RTTN
ZER1
TMA16
SAAL1
SLMAP
PNPT1
CDK11B
CDK11A
ACTR3
NDUFS3
KBTBD4
ZNF3
KMT2C
SNRPB
UTP3
C18orf25
NBN
TRIM32
ASTN2
U2AF2
LTF
TRIM41
LUC7L2
PDE4A
SLC24A1
CDKN1A
ZDHHC4
CNOT6
CIPC
ZBTB4
SLC35G6
POLR2A
ERCC5
IFRD2
TGFB1
DERL3
BROX
AIDA
MYEOV
KANSL3
FER1L5
CREM
MRPL58
TNFRSF21
LSP1
PCBP2
KLHL20
TUT1
TMSB4X
H2BC11
H2AC11
SMG6
ENOSF1
RMND1
ARMT1
NAPA
SGCA
C8orf76
SMIM29
GET4
DHRS13
TRIP4
ZFAT
MCM3
WBP1
TSSC4
INO80B
ARL14EP
RGL2
RNASEH2C
CCNL1
VPS45
POLR2J2
FAM207A
RETSAT
ELMOD3
COMMD1
U2SURP
SNX3
PPIP5K2
CCT4
EDC4
ATF3
MMACHC
GPR68
NUP153
RUVBL1
EEFSEC
POLR2C
ZNF148
KLHL12
TIA1
USPL1
HMGB1
KMT2E
FTH1
KIF21A
MARCHF7
PAK1IP1
C6orf52
ATAD1
MED15
MRPL53
TIPARP
METTL7A
KAT6A
TMEM230
POLR3E
PTK6
NDUFA6
FLT3LG
PRMT5
UBE3D
DOP1A
FMNL3
NPAT
ATM
CARM1
TXNIP
MFSD4B
SNRPE
GADD45B
SSNA1
ANAPC2
TSHR
ARID2
TMEM41A
NFKB2
TMPO
PHF13
PRR14
MPEG1
C8orf58
CCAR2
CCDC43
ATP7A
SLC43A3
TOR1A
C19orf48
NSFL1C
FAM187A
SLC35A3
CCND3
H2BC5
H1-4
NAPG
EFTUD2
CCDC103
TAF8
GFI1B
TSC1
SCAF11
TNFAIP3
PES1
FAM104A
C17orf80
DNAJC9
RARA
MAT2A
RCBTB2
PRMT3
C7orf26
PBLD
HNRNPH3
EEF1A1
BCL9L
AGK
VARS1
MAPK1IP1L
H1-2
TAF6
CNPY4
TMEM101
ZNF784
RWDD3
TEKT2
ADPRS
FARSB
FAM104B
KIF15
KIAA1143
NXF1
DCXR
IL2RB
MRPL38
THOC1
BUB1B
RMDN3
ARHGAP22
ZNF740
CSAD
CARS2
SNAI3
WDR11
LYRM4
FARS2
INTS7
DTL
NOL11
RAD52
C1orf159
AP2M1
MRM3
GLOD4
ANGPTL4
SREBF1
BCAR1
CPT1A
MYLIP
TNPO3
ARID3B
ZNF367
SLC25A20
PGLYRP4
TAGLN2
DKK1
TINAGL1
SQSTM1
SOAT2
DHRS3
ACTN4
MEAK7
IGFBP6
PDE12
VGLL4
RXRA
ZMYND8
ACACA
KRT7
DLG4
ACADVL
TES
COTL1
DBP
PEAR1
PEMT
RBM24
S100A2
TSKS
AP2A1
ECH1
GPX4
TRIM25
FASN
SIRT5
TRIM55
FOSL1
NUBP1
TGM2
KLF10
ZGPAT
ARFRP1
USP32
TRIL
CRY1
NFKBIA
ETFDH
C4orf46
ERCC1
FHL2
DOT1L
FBXO46
GABRE
PHC2
SCNN1A
LTBR
RARB
RRN3
TBP
PSMB1
COL23A1
AMOTL2
ANXA1
CCL20
UROS
BCCIP
PLAU
WDFY2
OTUD7B
AJUBA
ACSL3
LMNA
C2CD2
SH3BP4
SPEGNB
GMPPA
SEPTIN9
UPP1
LOC100509620
RGS3
PLEC
FRG2C
MLYCD
LY6K
SCRN2
FAM184A
BCL9
CAT
MUC5AC
CITED4
AXL
ETFA
PLIN4
KRT8
RALGDS
PLIN2
KCNMA1
LOC389199
AFAP1
MYBL2
ANKRD28
BCKDK
ANAPC15
GIP
ROCK2
GPC1
SRCAP
LOC730183
SLC45A4
DENND4B
NUDT15
ETFB
PPP1R15B
NFE2
C16orf95
GKN1
SPRED2
REXO4
ADAMTS13
STT3B
ABCA1
SDCBP2
HMGCS2
CLCF1
ABCC10
ACAA2
LOC102724265
SOCS2
HSD17B4
MAP2K3
ZNF366
RIPOR3
DBI
C2orf76
ABCC3
PIP5K1A
MLLT3
NEDD4L
SULT1C2
UPF2
PSCA
PTPN4
NFIB
PLEKHM2
CLDND2
NOL7
COL16A1
SMAD3
ABHD6
ITGB2
ATXN2
COQ5
RRAD
SH2B1
KCNAB2
ASAP1
BRWD1
FRG2
SPAAR
HADHB
HADHA
TMEM53
ARMH1
AKR1C2
HSDL2
SCAF1
RRAS
ADM
PHLDB2
ESRRA
RNF207
ZBTB7B
CPA4
SMTN
STX1A
PLD1
PPP1R12B
SYNPO
RIPK1
SCOC
RNF144B
C19orf33
ITGA3
CDV3
TPRA1
GCN1
HPCAL1
PTX3
RBMS1
TSPAN4
POLR2L
CYP26A1
APOC1
USP49
G0S2
ISCA1
ID1
SPIRE1
FBXO32
RANGAP1
TCTEX1D4
BTBD19
SLC19A3
TBL1XR1
SMAD7
ABHD2
PTTG1IP
SETD1B
DNAJB3
MACROH2A1
ADAM17
SBNO2
SKIL
HRCT1
TECPR1
SLC8A1
TFAP2A
MEF2D
PDCD1LG2
KMT2A
PUS10
ITGBL1
KRT80
FBXO31
ZFAND2A
UBE2H
IST1
ARHGAP24
PAX8
SCARB1
IBTK
GPR39
SH3YL1
ACP1
NR2C2
ZBTB37
TMCO6
ANK1
DAGLB
TXNDC11
SERPINE1
PARP4
SYDE2
HIVEP1
GRHL3
PRPH2
GPC6
ZKSCAN8
PKM
SLC50A1
LDLR
UGT1A1
HERC5
GPRC5A
MYL12B
TLN1
CREB3
FGG
OARD1
RBKS
BABAM2
SLC6A12
F2
BRF2
PRKCD
CXXC5
NR1D1
ZDHHC19
SLC51A
PLEKHA7
MMP19
SPG7
NIBAN2
CCDC57
NR1D2
NKIRAS1
MIDN
CARHSP1
OSMR
ARFGEF2
FAM98B
STRA6
IL7R
PFN1
ENO3
TAF9
RAD17
AK6
TLE1
PEX13
ZFP36
WDR81
TMEM182
FSCN1
GSN
GPR137
RUNX1
LEKR1
BCL2L1
EIF4E
PRR7