ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
CCDC200
AADACL4
MTRNR2L8
BSDC1
MAMDC2
COL4A5
COL4A6
SUPT7L
SLC4A1AP
KCNJ15
C19orf18
IRF6
ZNF408
ARHGAP1
WDR74
GALNT1
GABPB2
RBM33
KDM3A
ATF7IP
PAXBP1
YPEL3
TBX6
KRBA1
RPS26
TMEM79
SMG5
TARS2
CDIPT
LGALS3BP
UBB
RGPD2
RGPD1
DHRS2
MTRNR2L2
MSH3
DHFR
CANT1
THG1L
ARID1A
ZNF540
ZNF571
PRPSAP1
RPH3AL
HDAC8
PIH1D2
NKAPD1
CCNI
NDUFB3
FAM126B
MAP3K14
CALCRL
CCL20
CELF1
AHCYL1
RPL27
LRIG2
PLA2G2A
TCTEX1D4
BTBD19
KAZN
RHOQ
ATP6V1E2
PPP6R1
PDE4DIP
CLPTM1
AURKAIP1
PPIL3
NIF3L1
GTPBP3
ANO8
ARTN
TFPT
PRPF31
CELA2A
ZNF806
RPS24
POLR3A
ZDHHC6
VTI1A
RBBP5
RCAN1
NOL12
SSBP1
ZNF577
INTS5
SLC9A1
SERPIND1
APOA1
MAST2
KDM5C
SLC39A6
ELP2
RABGAP1
UBE3B
KCTD10
ABRACL
TNFRSF1B
EIF2S1
ATP6V1D
RAG2
IFTAP
PDE12
IL17F
NEK2
CDK12
EVPL
ISY1-RAB43
ISY1
MRPS33
GTF2H4
PRSS41
ZNF302
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
ZNF383
CREM
DNAJC16
CASP9
WDR83OS
WDR83
MAN2B1
GBA
ARHGAP39
TBL1X
TPM3
AKIRIN1
ELFN2
SLFN12
SF3A3
MTF2
BCL10
COX7A2
ARHGEF2
AAAS
NBPF1
B4GALT3
SIRT3
PSMD13
THEM4
SEC22B
MMACHC
ZNF585B
FAAP20
CD2BP2
YWHAQ
AP1G1
IGFL4
SLC33A1
ARID3B
GPC6
BAIAP2
LACTBL1
ZMPSTE24
EIF3F
TTC26
LRP6
PPRC1
COIL
TRIM5
LIMK1
TRIM22
EPRS1
ERICH4
DMAC2
ZW10
SNIP1
DNALI1
ZNF750
SELENOH
STC1
C3AR1
DYNLRB2
STX1A
ILF2
RFFL
HEMK1
C3orf18
PLEKHG1
TMEM242
COX16
CASP10
SCMH1
RMND1
ARMT1
SNRPD1
NID1
KCNH4
HCRT
PARP15
IFI6
TNPO3
DDX42
CCDC47
PRRT1B
NEMF
CD14
GLIPR1L2
CHMP7
ZNF572
RABGAP1L
TPK1
CYB561D1
ZNF226
COPS4
PHC2
PACSIN2
ARMCX5-GPRASP2
MRPL54
APBA3
ARMCX5
NME1
RPA2
TTC39C
AKR1A1
STAT3
RERE
RNF125
LMNA
CEP120
STK40
ZNF790
FAM209A
MRPL1
CNGA1
AIFM1
MICALL1
LSG1
INKA2
DDX20
ITPR3
SCT
CDHR5
DNAJB12
WDR55
USO1
SLCO1A2
ZNF793
C1orf174
TTLL2
FBXW10
PHF5A
ACO2
COL18A1
HEATR1
INTS2
ZNF335
REXO4
ADAMTS13
NCOA7
MXI1
UQCRC2
DYNC2I2
YTHDF2
TIMM10
JMJD1C
CEP162
MTR
CGGBP1
C3orf38
FNTB
PLEKHH2
EIF1AD
BANF1
MTBP
MRPL13
KDM6B
PLAU
PLAAT2
MIS18BP1
SLC25A53
TUFT1
PEAK1
HMG20A
TMEM247
SH2D5
ASAP3
TUT1
ZNF56
NR1I2
SLC35A4
APBB3
UFC1
RBM25
MED11
GAPDH
BEST4
CCDC130
TRUB2
COQ4
PLK3
SHOC2
BBIP1
AGTPBP1
CCNC
CLASP2
CALCB
TBC1D19
ZBTB40
LIG3
TRMO
TXNRD1
RNF207
SNX27
EIF5A
TIMP4
NHLH1
MROH7
PSMB7
ZNF829
ZNF568
RPL11
NOL8
CENPP
MIDEAS
NYX
KRT19
RSPH3
FRRS1
RHOD
NDUFS7
RBMS2
GPX1
CPN2
GPX8
CCDC97
SMG8
ZKSCAN2
SCYL3
RCC2
CRTAM
ZNF331
DUSP14
ZNF461
RFXANK
BORCS8-MEF2B
BORCS8
PRKCSH
CCDC151
ANKRD1
DUX4
GTF3C5
TIMM9
KIAA0586
BNIP5
CDH1
TMEM107
ZNF221
TNFRSF1A
SIN3B
PCNP
SUGP1
MAU2
MNAT1
BORCS7
CSTF2T
TRMT11
PRIMPOL
CASP3
DLX4
CLN3
APOBR
SMG9
RIMBP3C
RIMBP3B
WSCD1
INPP5A
RPL7L1
SCARB1
VGLL1
ZNF623
TRMT1
NACC1
RCAN2
HEBP2
MTMR11
GORASP2
ZFP30
POMGNT1
LURAP1
ZNHIT3
HAPLN2
USP9X
NME7
BLZF1
MTHFD1L
AASDH
MTRNR2L9
PSMB5
ZNF566
TM2D1
XPNPEP3
ST13
SYAP1
FAM184A
FEM1C
ZSCAN22
RPS3A
ZNF300
AMHR2
WDR11
ZSCAN30
SIRT4
SLITRK5
SLC7A11
SULT1C2
ZSCAN23
BNIP1
NUDT9
FAM234A
PSMD3
STAT6
UBQLN1
PGLS
GAL3ST2
RCN1
TEFM
KDM1A
TEX46
PXT1
KCTD20
SLC39A9
ERH
NUDT5
CDC123
JUN
TFB1M
C6orf118
FRA10AC1
PPIP5K2
IRF9
STBD1
CLCN3
FAM89A
C19orf25
ADRA1A
TCIM
MED18
RBL1
TBC1D22A
NAV2
PLPP5
ADAT1
UTP3
SLC41A3
SESN1
SGMS2
CEP57L1
CPD
TIAM2
PHACTR4
TTC31
CCDC142
RASL10B
ZRANB2
NIP7
COG8
NFYC
CHPF2
ABCF2-H2BE1
ABCF2
TBC1D1
OCIAD2
FBXO46
TRPV2
ELSPBP1
BSPH1
SUMO3
UIMC1
SPEF2
CCNG2
NRL
DCAF11
TRAFD1
ZSCAN4
CD320
IAPP
FCRLA
KLHL34
PES1
OPRL1
LKAAEAR1
UFD1
CDC45
PLS1
GPATCH3
RIN2
EXPH5
CARHSP1
HOXB13
SYT16
VPS13B
PRPF18
EFCAB14
CTSB
SFXN3
PDZD7
RPS7
SOD2
CCNY
WTAP
RIPPLY3
TRIM25
ARMC1
EIF2AK3
TTC32
TTLL12
MSRA
CLASP1
RPS27A
CLHC1
CSNK1E
NTN1
PIP5KL1
CLTC
EIF3E
SPSB1
PREPL
CAMKMT
SLC1A3
CELF3
KLK10
TTC9B
CLDN7
ISLR
RIIAD1
MRPS18C
HELQ
MRPS23
NHSL1
RGL2
DCTPP1
UBE2F
METTL25
CCDC59
BANP
LZTR1
TOMM40
GTF3C3
ZNF165
TRAPPC8
KIAA0319
MYO1B
LOC100509620
EFHD1
GABPA
ATP5PF
C19orf48
LRRFIP1
SMIM12
AKR1D1
CMSS1
KCTD9
CDCA2
ORC2
PEF1
CBR1
KRTAP10-9
ECPAS
SAT1
TMEM89
DLAT
OSBPL8
KAT7
IFT46
ZNF2
CACTIN
RUFY4
SPR
RAI1
CPPED1
TIGD1
EIF4E2
ARHGEF18
SNX3
TEF
ABCD2
ZNF14
NRDE2
PSG9
SH3BP4
CALD1
MAIP1
ALG14
RIF1
SFSWAP
ZXDC
ALDOA
PLK2
NECAP1
RETREG2
CNPPD1
NOP16
HIGD2A
CCDC115
PDZRN3
ROCK1
GNA12
HSCB
CHEK2
IPO4
CCDC107
TXN2
FERMT3
ZNF24
C1orf158
AQP12B
RPS14
POLR2J3
EHD2
ZBTB8OS
RBBP4
ZBTB25
ZBTB1
TBCB
ADGRL1
TPGS1
SF3A1
CCDC157
POLR2I
OVOL3
NEURL4
SPATA1
GNG5
CYP27B1
METTL1
EEF1AKMT3
TRIP10
CLCN4
PDXP
PUS10
PEX13
TMEM259
CNN2
SRSF1
CERK
PLEKHG2
POLD4
UTP18
MBTD1
INO80C
WBP1
INO80B
CCDC174
KRTAP10-6
LTBR
KIF20A
BRD8
SCNN1A
CLK4
SUGCT
MPLKIP
STK32C
CNIH4
MAD2L1BP
TTC14
GTPBP2
ZNF260
TBC1D2
SULF1
LRRC27
LYPLA2
PIK3CB
MRPS14
IPO13
VPS52
RPS18
RHOT1
PEMT
NCF4
CHRNA9
NKX3-2
MAN1C1
CEP85L
ATG4C
ANKRD17
HBS1L
USP22
TXNDC17
KIAA0753
FAM222B
GALM
RIPK4
PEX3
ADAT2
MRPL48
DHX16
TMEM222
TMBIM1
CORO2A
SASS6
CZIB
ARMC7
PNISR
STX12
KLF6
ZFR2
STX18
TUBB
MDC1
TMEM128
MEIG1
ZNF708
DCLRE1C
GTF3C6
CDK5RAP2
AKR1B15
LIMCH1
THOC5
YJU2
MOB4
POLG
IGF2R
SLC25A44
DDX41
OSGEPL1
TAOK3
FDXACB1
C11orf1
CEP126
ANGPTL5
TM9SF4
CTH
HAUS6
ZFC3H1
THAP2
CES3
S100A11
ADIPOR1
KMT5C
ARHGAP18
PRSS23
EPB41L3
RFTN2
SLC6A18
SPRR2F
ABR
TMEM69
GPBP1L1
HACD2
G2E3
GABARAPL1
FBXO7
WASF1
MBNL2
CDC40
CFAP43
FUCA1
MRPL11
MEGF8
CDK14
CALM2
IRF2BP2
TNFRSF19
FOXO3B
C16orf92
COPS7A
UBXN7
NAA38
NSUN3
DHFR2
TMEM88
CYB5D1
CENPA
IFI44L
GLCE
LRP10
CTSK
GHDC
PDE11A
RBM45
POLR3E
DHX32
ZNF585A
DNAJB4
AARSD1
CSF3R
PTPA
MED16
CRAT
FURIN
RTL9
RUVBL1
TMOD1
TMEM101
CD248
NDUFS3
KBTBD4
RPL26
TIMM50
ARID5A
S100A13
DNAL1
HTR3A
NHS
SH2D3C
SLC27A1
S100A1
RHCG
GTSF1L
MBOAT4
DNAJC25-GNG10
DNAJC25
PMF1-BGLAP
PMF1
PPOX
TES
TAF12
LIMA1
BRCA1
RPF1
WASF2
DONSON
GABARAPL2
MTUS1
AP2M1
RAB40C
PIKFYVE
SNRPD3
GUCD1
ZBED9
PRDM1
ATP2C1
CRTAP
SMARCAD1
ACSL1
ZBTB7B
TRIM10
CDC42EP1
LCN8
PRKAG2
PPIG
THOC2
ASF1A
SLC35E2B
TMEM205
CCDC159
DLGAP4
TENT2
RAB3D
HEXIM1
SBNO1
MYEOV
PPARGC1A
CSTF3
TMEM53
ARMH1
TUSC3
KLRC3
DMAP1
ZBTB45
TIAM1
CACNG1
SRSF4
GCNT2
COA3
CNTD1
UTS2R
BRD4
PLA2G6
APOBEC3G
SLFN5
KANSL3
FER1L5
ZSCAN25
DDX46
UBL7
CENPW
SMAD3
POLR3F
DZANK1
SEMA4A
CMBL
PDE10A
DSC2
FYB2
SHB
PLCD3
ACBD4
TPD52L1
AP3B1
GOSR1
FOXP4
SIAH1
CARS1
HROB
ZNF573
ZBTB20
DDI2
SUPT4H1
HSPA5
ZNF506
ZNF215
KLRC2
CASQ2
OR2D3
F2RL1
ACOX3
TRMT44
ARHGAP19
UBOX5
FASTKD5
DYNC1I2
TNFAIP3
DOCK3
SRCAP
LOC730183
MRPL27
EME1
SH3BP5
SYNJ2BP-COX16
SYNJ2BP
PRKCZ
CHKA
DDX3X
ABI3BP
PAFAH2
RAB30
MTIF2
PDCD6IP
BRWD1
FAM71E1
EMC10
HIBCH
GLI1
APOL2
WDR5B
TBC1D9
SPON1
TTI2
SNAP47
JMJD4
GADD45A
DNAJC11
LNPEP
MRPS15
PTAFR
FAM199X
TMEM138
CYB561A3
KDM8
UBE2Z
LRIF1
ACTA1
LMNB2
ASXL3
LMNTD1
APOL1
ASB5
KIF2C
TRMT61B
NEK4
CRNKL1
CFAP61
PIGL
NCOR1
PDE4B
AGPS
DNPEP
KIFBP
NPEPPS
LMNB1
XKR3
PTDSS2
ANO9
MLEC
C2CD5
SLC4A8
FGD4
GALNT6
FAM124B
TAOK2
ATXN7L3B
PHLDB2
CREB3L2
CDYL
C18orf21
ATP5MC3
LRRC49
SPAG9
MCCC1
HELZ2
REPS1
IREB2
KLHL18
KIF9
FAM160A2
CNGA4
GBP2
CD164
LARP6
LSM5
AVL9
CLUAP1