ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
ZNF436
MAPRE2
ITGB3BP
EFCAB7
CCDC200
KCNJ15
AADACL4
PI4K2B
MTRNR2L8
PAQR8
BSDC1
MAMDC2
PRKACB
COL4A6
COL4A5
SUPT7L
SLC4A1AP
C19orf18
FGD3
F2RL3
IRF6
ZNF408
ARHGAP1
WDR74
STX5
GALNT1
GABPB2
NBPF1
RBM33
KDM3A
ATF7IP
IKZF3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL55
OBSCN
SCTR
PAXBP1
SLC2A8
YPEL3
TBX6
KRBA1
CYB5R4
ABR
RPS26
TMEM79
SMG5
TARS2
CRLF2
CDIPT
LGALS3BP
UBB
RGPD2
RGPD1
DHRS2
MSH3
DHFR
MTRNR2L2
NOX5
CANT1
C1QTNF1
ZNF426
THG1L
ARID1A
LCA5
ZNF540
ZNF571
SRPRB
PRPSAP1
RPH3AL
HDAC8
ZNF134
DEFA1B
DEFA1
WEE1
SMYD3
PIH1D2
NKAPD1
SAMD14
CCNI
L2HGDH
DMAC2L
NDUFB3
FAM126B
MAP3K14
CALCRL
CCL20
CELF1
MT1HL1
AHCYL1
RDH12
DUX4
LRIG2
RPL27
IFI35
PLA2G2A
RRAGB
TCTEX1D4
PLK3
BTBD19
KAZN
RHOQ
ATP6V1E2
CELSR1
DYNC1H1
PPP6R1
PDE4DIP
RPIA
CLPTM1
APOC2
FCGR1A
ST20-MTHFS
AURKAIP1
ZNF594
GDNF
VSIG1
PPIL3
NIF3L1
ZSCAN32
ZNF174
GTPBP3
ANO8
ARTN
TFPT
PRPF31
SMTN
CELA2A
ZNF806
ZNF514
RPS24
POLR3A
KSR1
ZDHHC6
VTI1A
RBBP5
SAMD7
RCAN1
NOL12
SSBP1
ZNF577
INTS5
GANAB
SLC9A1
ANKRD35
SERPIND1
GTPBP4
APOC3
APOA1
MAST2
KDM5C
SLC39A6
ELP2
ZBTB26
RABGAP1
UBE3B
KCTD10
SLC5A1
ZNF555
ABRACL
TNFRSF1B
EIF2S1
ATP6V1D
RAG2
IFTAP
GNB1
PDE12
TLE4
IL17F
NEK2
CDK12
MED1
EPHA2
PM20D2
PRSS21
NARS2
EVPL
ISY1-RAB43
ISY1
GJC1
MRPS33
VARS2
GTF2H4
PRSS41
ZNF302
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
ZNF383
CREM
ZNF585B
DNAJC16
CASP9
OPN1MW
OPN1MW3
OPN1MW2
WDR83OS
WDR83
MAN2B1
ARHGAP39
GBA
TBL1X
NKX1-1
NOTCH2
FGFBP3
TPM3
AKIRIN1
ELFN2
C1orf189
SLFN12
SF3A3
MAGEA11
ZWINT
MTF2
BCL10
ZNF891
ZNF10
COX7A2
ARHGEF2
AAAS
KANK4
UBAC1
IL22RA2
B4GALT3
SIRT3
PSMD13
WDR33
ACY3
THEM4
SEC22B
TMEM125
TESK2
MMACHC
AGFG1
FAAP20
CD2BP2
MID2
TSKU
YWHAQ
AP1G1
IGFL4
SLC33A1
ARID3B
GPC6
BAIAP2
AEBP2
LACTBL1
INKA2
DDX20
ZMPSTE24
TMCO2
PISD
ZNHIT6
EIF3F
TTC26
LRP6
PPRC1
COIL
TRIM5
TRIM22
LIMK1
EPRS1
DMP1
ERICH4
DMAC2
ZW10
CLDN25
SNIP1
DNALI1
ZNF750
SELENOH
STC1
PCDH9
C3AR1
DYNLRB2
STX1A
NPR1
ILF2
PACSIN2
RFFL
HEMK1
C3orf18
CITED4
PLEKHG1
TMEM242
KAT6B
COX16
CASP10
SGPP1
SCMH1
SMAD5
RMND1
ARMT1
SNRPD1
KCNH4
NID1
HCRT
PROC
GPR35
IFI6
PARP15
PARP9
DTX3L
TNPO3
DDX42
CCDC47
NEMF
PRRT1B
CD14
CHMP7
GLIPR1L2
ABLIM1
ZNF572
RABGAP1L
CYB561D1
ATXN7L2
TPK1
ZNF226
SOD2
COPS4
PHC2
HSDL1
DNAAF1
MRPL54
APBA3
RHOC
ARMCX5-GPRASP2
ARMCX5
NME1
RPA2
AKR1A1
TTC39C
RERE
STAT3
RNF125
LMNA
CEP120
STK40
ZNF790
FAM209A
ID2
CNGA1
MRPL1
RAB33A
NIPAL1
AIFM1
MICALL1
PTP4A1
LSG1
TIMP3
ITPR3
ZBED9
DRD4
KRT10
CDHR5
SCT
DNAJB12
DND1
WDR55
TMEM72
USO1
SLCO1A2
ZNF793
C1orf174
FBXW10
TTLL2
AK2
TMEM127
CIAO1
PHF5A
ACO2
OPN4
COL18A1
COQ8A
HEATR1
INTS2
ZNF335
REXO4
ADAMTS13
NCOA7
MXI1
UQCRC2
DYNC2I2
YTHDF2
TIMM10
SMTNL1
EDF1
JMJD1C
EDDM3A
CEP162
SFRP2
MTR
LIMS1
CGGBP1
C3orf38
FNTB
ELL
PLEKHH2
EIF1AD
CST6
BANF1
MTBP
MRPL13
KDM6B
PLAU
PLAAT2
SLC25A53
FAM199X
MIS18BP1
RGPD6
DHRS3
C5AR1
TUFT1
PLK2
PEAK1
HMG20A
TMEM247
LIMS4
SH2D5
ASAP3
ZNF3
TUT1
MTA2
ZNF56
SLC35A4
APBB3
SRA1
NR1I2
APOL6
USP21
MED11
UFC1
ZMYND15
CXCL16
RBM25
GAPDH
IFNL2
BEST4
CORT
CCIN
CCDC130
LY6L
TRUB2
COQ4
SLC25A33
SHOC2
BBIP1
AGTPBP1
CCNC
CLASP2
RMI1
HNRNPK
EIF4A3
ZNFX1
CALCB
TBC1D19
ZBTB40
TRMO
LIG3
TXNRD1
MAP7D2
ZBTB33
RNF207
RPL22
ARHGEF3
SNX27
GPS2
EIF5A
NHLH1
TIMP4
SPATA12
SHISA3
MROH7
RPL12
LRSAM1
PSMB7
HKDC1
ZNF829
ZNF568
BIK
RPL11
MIDEAS
NOL8
CENPP
CTR9
NYX
KRT19
GLT6D1
FRRS1
TAF12
HEXB
RSPH3
RCN1
RHOD
LMTK2
NDUFS7
KCNMA1
PSAP
RBMS2
MKLN1
PTPRH
GPX1
CPN2
GPX8
ZNF24
CCDC97
SMG8
STN1
ZKSCAN2
APOLD1
SCYL3
ARL15
RCC2
CRTAM
CCKAR
ZNF331
DUSP14
LSM4
RFXANK
BORCS8-MEF2B
BORCS8
ZNF461
PRKCSH
CCDC151
ANKRD1
GTF3C5
TIMM9
KIAA0586
THAP12
GVQW3
SPOCK2
CDH1
BNIP5
CDC73
CHAD
TMEM107
ZNF221
ENPP1
TNFRSF1A
SIN3B
ENSA
PCNP
GLRX2
LOC102723996
ICOSLG
SUGP1
MAU2
KRT31
BORCS7
MNAT1
NUB1
CSTF2T
TRMT11
DLX4
PRIMPOL
CASP3
CLN3
APOBR
FAM81B
SMG9
SCGB1C2
SCGB1C1
UBE2L3
RIMBP3C
RIMBP3B
ZBTB38
TAGLN2
WSCD1
BFSP1
INPP5A
RPL7L1
SCARB1
SLC19A1
ZNF704
ISX
VGLL1
ZNF623
PRKG1
TRMT1
NACC1
RCAN2
HEBP2
ZFP37
ZNF251
MTMR11
LONRF3
LDHD
GORASP2
ZFP30
ZC3HAV1
POMGNT1
LURAP1
HAPLN2
ZNHIT3
NFATC3
USP9X
NME7
BLZF1
MTHFD1L
RPAIN
NUP88
AASDH
MTRNR2L9
PSMB11
DNAL4
PSMB5
ZNF566
TM2D1
SYAP1
CTPS2
XPNPEP3
ST13
DNAJB7
FRAT1
OR13H1
FRAT2
FAM184A
FEM1C
ZNF300
ZSCAN22
RPS3A
RFC4
AMHR2
LOC102724770
DGCR6
ZSCAN30
CYP46A1
WDR11
SIRT4
SLITRK5
GYG2
SLC7A11
SULT1C2
ZSCAN23
BNIP1
NUDT9
LUC7L
FAM234A
PSMD3
STAT6
UBQLN1
ASIC3
PGLS
GAL3ST2
PNMA3
TEFM
TEX46
KDM1A
NRSN2
PXT1
KCTD20
SLC39A9
ERH
TFB1M
NUDT5
CDC123
JUN
C6orf118
PTPRN2
NRARP
FRA10AC1
PPIP5K2
ATL1
IRF9
STBD1
CLCN3
TCIM
FAM89A
C19orf25
ENKUR
ADRA1A
TBC1D22A
ARL4D
MED18
RBL1
NAV2
PLPP5
ADAT1
CCL7
CCL11
SLC41A3
UTP3
SESN1
SGMS2
CEP57L1
CPD
CCDC142
TTC31
TIAM2
MYOM2
PHACTR4
RASL10B
SIPA1L2
ZRANB2
PDF
NIP7
COG8
NFYC
CEBPA
CHPF2
ABCF2-H2BE1
ABCF2
TBC1D1
OCIAD2
LMBR1
FBXO46
CNIH3
MPP1
TRPV2
ELSPBP1
BSPH1
SUMO3
GRAMD4
NRL
DCAF11
SOX30
UIMC1
SPEF2
IAPP
CCNG2
TRAFD1
ZSCAN4
CD320
FCRLA
KLHL34
PES1
OPRL1
RGS19
LKAAEAR1
BZW2
ZNF416
UFD1
CDC45
PLS1
GPN2
GPATCH3
RIN2
SSUH2
RNF223
SYT16
EXPH5
CARHSP1
PRAC2
PRAC1
HOXB13
LGI2
VPS13B
PRPF18
CTSB
DDX47
EFCAB14
SFXN3
PDZD7
RPS7
ZNF501
ZNF502
CCNY
WTAP
RIPPLY3
TRIM25
ARMC1
EIF2AK3
MMP28
ZNRF3
GPR1
TTC32
TTLL12
MSRA
GLRA1
FKBP5
RMND5A
ZNF230
RPS27A
CLHC1
RPRD1A
PAFAH1B1
PC
CLASP1
ZFP36L1
DPM2
CSNK1E
NTN1
PNPLA5
PIP5KL1
ZNF662
ABLIM2
CLTC
EIF3E
SPSB1
FANCC
FOXP4
KDELR1
GRIN2D
PREPL
CAMKMT
CDKN1A
SLC1A3
CLDN7
TTC9B
CCNP
RIIAD1
CELF3
KLK11
KLK10
ISLR
MRPS18C
HELQ
MRPS23
ZNF22
NHSL1
DCTPP1
RGL2
PFDN6
UBE2F
METTL25
CCDC59
BANP
MRPL48
LZTR1
TOMM40
BAMBI
SASH1
C2orf66
ZNF165
CD209
GTF3C3
OR1F12
ZNF518A
GRAMD1C
NAA20
LOC100509620
MVB12A
PRDM1
TRAPPC8
KIAA0319
MYO1B
BST2
HTR3B
CLIP2
E2F2
EFHD1
GABPA
ATP5PF
CASP7
C19orf48
LRRFIP1
RAB40B
EAPP
SAR1B
SMIM12
CMSS1
KCNAB2
AKR1D1
KCTD9
CDCA2
ORC2
PEF1
LGI1
CD109
SAP130
TLE7
KRTAP10-9
ZNF75D
PSMG4
SETD4
CBR1
SLCO4A1
GNA13
MSANTD4
ECPAS
SAT1
C2CD4D
UTRN
THEM5
UQCRC1
TMEM89
ZNF792
DLAT
IRAG1
ZNF454
OSBPL8
IFT46
ARCN1
TNFRSF10B
RUFY4
KAT7
ZNF2
CACTIN
RAI1
SPR
CPPED1
LCP2
TIGD1
EIF4E2
ARHGEF18
SNX3
ADAMTS17
ZNF14
TEF
C12orf40
ABCD2
NRDE2
PSG9
SH3BP4
KRT6B
KRT75
CALD1
MAIP1
EXOC2
ALG14
RIF1
SFSWAP
HECTD4
SLC23A3
ALDOA
NECAP1
NEDD4L
ZXDC
RETREG2
CNPPD1
BEST2
NOP16
HIGD2A
IMP4
CCDC115
PDZRN3
SORBS1
GNA12
ROCK1
HSCB
CHEK2
SGIP1
KLHDC7B
ZNF823
TYMP
ODF3B
ZSCAN31
ELAC1
TM9SF1
TXN2
IPO4
SIT1
CCDC107
ARHGEF39
CYB561
SERPINA3
FERMT3
C1orf158
PJA1
AQP12B
AQP12A
ZNF527
RPS14
POLR2J3
EEF1AKMT3
TPGS1
EHD2
ADGRL1
ZBTB8OS
RBBP4
ZBTB25
ZBTB1
TBCB
POLR2I
OVOL3
TRAF4
SF3A1
CCDC157
NEURL4
ACAP1
CDR2L
HID1
RRP12
SPATA1
GNG5
METTL1
CYP27B1
TRIP10
GPR108
PTPRK
CLCN4
PDXP
PUS10
PEX13
TMEM259
CNN2
PCYT1A
PRRC2B
CERK
SRSF1
ZFP36
PLEKHG2
POLD4
UTP18
MBTD1
ZNF550
INO80C