ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SMCO1
BSDC1
ITGB3BP
EFCAB7
APOA1
CCDC200
C19orf18
WDR74
AADACL4
DEGS2
KRBA1
YPEL3
TBX6
UBE2F
MAMDC2
CBX1
RABGAP1
OPRL1
LKAAEAR1
ZFP30
TMEM89
DISP1
STC1
ZNF32
GBA
ZNF572
ZNF829
ZNF568
LCN8
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
PTDSS2
ANO9
ZNF623
PRSS38
MTF2
SAMD4B
SF3A3
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
RNF187
KRTAP5-1
COL23A1
TMEM229B
CANT1
COX16
DHRS2
UTP3
CLTB
NUF2
CFHR4
DBNDD2
MROH7
TMEM132A
COL18A1
ZNF292
GALNT1
ZSCAN22
TBC1D19
ATP5MC2
FAM209A
RPS7
TRMT5
SLC38A6
ZNF566
ACTL8
SOD2
WTAP
ANP32D
GTF2H4
TOMM20
TMEM41A
SSBP1
RWDD1
MMEL1
CCDC174
TSFM
TARS2
ATP1A1
IGFALS
HTR5A
RNF125
SELENOH
NEMF
MAN2A1
EPHA3
SLC24A1
RERE
CAT
TTI2
ZNF772
GPRC5C
CEP85L
ZNF570
ZNF569
PRRT1B
ZNF117
ATF7IP2
MAST4
SLC1A7
MED23
TRIP4
CWC25
PNMA2
DPYSL2
TIGD2
SLC45A4
DMAP1
SLC43A2
MRPL1
ZNF790
FBXW7
ZBED9
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
MNAT1
GTF2H2C_2
GTF2H2C
TTLL1
TRIM41
OSGIN1
BRAP
ACAD10
LRCOL1
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
YJU2
MLPH
LARP1
ARHGAP39
MTR
PDCD6IP
FAM13A
SNRPE
CDC5L
C2orf88
PDE1A
GALNTL5
MMACHC
CCDC130
MAIP1
TXLNB
JMJD1C
TDP2
ACOT13
FAM184A
SMG7
RAB18
RAB30
PAFAH2
BANP
ZNF226
ERN2
TLR2
TMEM242
TTC32
RNF217
HDAC2
SUMO3
TTC26
FGFBP3
PPIH
RBBP9
SIKE1
TMEM44
PAXBP1
FRA10AC1
DNAJB12
APRT
PPRC1
SKP2
LMBRD2
MRPL48
NME1
TARS3
FAIM
ZMPSTE24
PDGFD
RAB5IF
EXTL2
TMEM14C
LRRC49
THAP10
RUNDC3B
TMEM38A
SMIM7
GCGR
KDM3A
METTL25
CCDC59
STAT3
MRPS18C
HELQ
TATDN2
EIF2D
NEU1
LURAP1L
SAR1B
RTTN
LRFN3
CHCHD6
POMGNT1
PNPO
LURAP1
TACO1
REEP3
HAX1
IARS1
SLC33A1
CD14
BMS1
CCDC107
GABPB2
TFPT
PRPF31
RCAN1
LIMK1
SLC35E3
CTAG1B
CTAG1A
ZNF391
MRPS14
SMIM13
PARP2
RANBP2
SLITRK5
MRPS23
ZNF540
ZNF571
ZNF350
HEXA
POLR3B
GALK2
COPS2
TPM4
TRMO
PARK7
ATP6V0E2
NUP155
ZNF687
RPL27
DEK
POLDIP3
REXO4
ADAMTS13
TMEM43
CHCHD4
RBM45
RPS3A
CALCRL
BAIAP2
ZNF165
PUS10
PEX13
STOML2
LRRC29
RPA2
GOSR1
ZNF354A
SYT1
SNCG
MMRN2
KANSL3
FER1L5
BORCS6
MYO1H
ZNF300
WDR11
METAP1D
CDK19
AMD1
GORASP2
DSTYK
NECAP2
PIH1D2
NKAPD1
RIF1
SAMD1
TTLL12
IL36RN
IL36B
SLC3A2
FAM199X
SGMS2
SYNPO2
TMEM259
CNN2
CCNL1
ZNF527
NRL
DCAF11
DCP1A
MOB4
NME4
NCOA7
REN
ZBTB8OS
RBBP4
PKIB
ABHD10
SERINC1
AURKAIP1
TEFM
RPL7A
MED22
CUL5
SURF2
SURF1
SULT1C2
MTRNR2L2
MSH3
DHFR
EPRS1
NUP54
INTS2
RPS13
SDR42E1
CLPTM1
SLC35B4
ZNF324B
CDC73
POLG
TIGD1
EIF4E2
RRP1
PNPLA7
RPS29
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
DCLRE1B
AP4B1
BORCS7
VPS45
ZNF20
SARS2
MRPS12
PPIP5K2
ZNF556
COX7A2
GTPBP3
ANO8
NUP107
SLAIN1
STX16
MRPL30
MITD1
ZNF841
SLC35A3
SNRPD1
PIGC
ECHDC1
LUC7L2
FMC1-LUC7L2
FMC1
EPB41
TMEM114
ZNF791
ZNF490
PCDH15
GABRR2
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
ARHGEF16
MSRA
KRR1
DYNLRB2
TTC3
TOGARAM1
KLHL28
MRS2
FDPS
SLTM
NBPF1
LRP6
DCT
EFHD1
SF3B5
KRTAP10-9
THEM4
OR4K17
SMIM31
COPS4
MRPS33
N6AMT1
TAF12
TRIM46
KRTCAP2
APOBEC3B
RPL37
RPS14
DRG2
MIER1
EP400
DNAI4
SPANXB1
EXO1
PPIG
GSTA4
ZMYND8
NOL12
FAM13B
NOS3
SEL1L
POLR1F
STXBP3
ZNF793
SLC2A7
OAZ3
STX18
EIF3F
CCDC97
ZNF385A
UBOX5
FASTKD5
ATG5
CCDC33
LAMTOR5
SPG7
OSGEP
APEX1
WDR36
ZNF383
ZSCAN30
METTL9
TMEM107
SPRR2F
P2RX6
RPS12
ZNF56
LRRC59
CDKL2
CDK5RAP1
PRDM1
CSNK1E
ACYP2
ST6GALNAC6
ADNP
ZNF134
TGFBR2
CLDN16
TMEM72
FOXO3B
TSTD3
HAPLN2
FBXO44
FBXO2
SLC30A5
MUC3A
TBL1X
ARID1A
NMRAL1
HMOX2
HIGD2B
BBS4
SRP54
ERMARD
ACTRT2
IRAK2
ATF7IP
LPIN1
DCP1B
POLR3G
MBLAC2
SUPT3H
CHEK1
PXMP2
POLE
SNX14
ALG10
ALG14
ZNF561
GPN2
UBR2
DAXX
ZSCAN31
TPR
ODR4
ALDH9A1
ZKSCAN3
MTMR9
CLN5
DPYSL3
CCDC120
DHX16
CPPED1
NUP205
DDX41
TRDMT1
GABPA
ATP5PF
PPOX
ZNF846
HBS1L
ADCY10
NARF
CYBC1
C3orf14
CALD1
BRF2
ATG4C
GRPEL2
B4GALNT2
GOLGA5
TMEM106B
CCDC124
SLC2A4
H2BU1
H2AW
INPP4B
SULT1C3
TPK1
PHIP
TIAM1
SRP9
GPR137
FOXP1
DNAJC19
WBP11
C12orf60
MAD1L1
C8orf37
RIMBP3C
RIMBP3B
CRNKL1
CFAP61
ZNF335
SLC17A5
MRPL24
CHD1
FAAH
SNIP1
DNALI1
DHTKD1
CNIH4
PLS1
GTF2B
TRMT11
RSL24D1
NMT2
PNISR
ASCC1
ANAPC16
GOLPH3L
SUPT7L
SLC4A1AP
PDE4DIP
ENG
ZSCAN25
TMEM101
WBP1
INO80B
SYNCRIP
TMBIM4
MTIF2
PES1
LOC102724265
HEATR1
LGR5
DNAJC24
DCDC1
IRF9
SEC23B
TAF13
ANKRD36B
LOC100129484
DUSP12
CEP85
HMGB1
USPL1
ABCB10
TNPO3
PLCH1
SLC25A21
EIF3D
BAG6
APOM
RUFY4
CYP17A1
VTA1
NMBR
CATIP
UCHL3
COMMD6
ARL14EP
TMEM116
ERP29
INSYN2B
ZNF285
RAD54L2
IPO4
ZNF408
ARHGAP1
WDR55
ARID3B
ABCA3
COG2
GRM4
UBE3B
KCTD10
DEDD
MICU2
KLHL32
CYCS
JOSD1
GTPBP1
TXNRD2
SEC22B
LSM5
AVL9
ZNF501
CCDC115
ATG101
MFSD8
HECTD1
ABHD18
UBE2L3
TXN2
VPS25
RNF144B
CFAP20
C6orf89
OSGEPL1
ZCWPW2
AZI2
HIPK1
FBXO28
MRPL45
ZNF589
SMAD3
PARPBP
NUP37
ELFN2
PBX3
IPO7
KLF16
EXOSC10
OPA1
TMEM222
RNF6
PACSIN2
FBXO22
SLC25A53
PSMD11
MYO18A
MED11
CFAP410
PGM1
AQP4
GPAM
DDX46
CYB5R4
PSMD6
NUDT15
PPDPF
WDHD1
SOCS4
IST1
MRPL53
FBXL19
SMPDL3A
PDCD7
POLR2J3
HACL1
BTD
SUGCT
MPLKIP
MAST2
ACBD6
GTPBP10
TM2D1
TNFRSF19
GYPC
UFL1
ELFN1
RIOK1
CAGE1
NLGN1
C15orf61
INO80C
ALKBH3
SF3B6
FAM228B
DDX18
MED18
RPS26
C17orf50
CSDE1
ATL1
DCAF8
IRAK1BP1
TAF3
ATG9B
ABCB8
CORO2B
MZT1
BORA
SPON2
INTS5
CCNI
RPTOR
C2CD5
PPP1R11
ZDHHC6
VTI1A
SIRT4
VPS52
RPS18
RFXANK
BORCS8-MEF2B
BORCS8
B3GALT4
HMGCR
ESCO1
LCA5
GPR89B
HMGCLL1
RAB37
ACOX3
TRMT44
ALG10B
TOR1AIP2
TOR1AIP1
MRPS31
ZNF518A
WARS2
EIF2S1
ATP6V1D
BOD1L1
VPS26C
CREBL2
GPATCH3
NDUFA12
LRRC10B
SFXN2
ARL3
SULF1
PLD4
TMEM59
TCEANC2
ZNF582
SNX17
EIF2B4
PAAF1
COA4
ZNF2
RIMBP3
WDR62
THAP8
TEX50
SNAP47
JMJD4
AASDH
FAM234A
COL4A5
IPP
MTRES1
THG1L
COL4A6
CIZ1
PDSS2
DRG1
PABPN1
ZNF3
SAYSD1
LTF
SPATA7
C11orf65
MMUT
CENPQ
C6orf118
SFN
PPP1R9A
ZNF345
GFM2
MRAP2
TMA16
TMBIM6
BCKDHB
HMGN4
KBTBD3
AASDHPPT
H4C14
GSR
PEAK1
HMG20A
SULT1C4
ASCC3
GPATCH4
SCGB1C2
SCGB1C1
DPY19L4
MRPL21
IGHMBP2
SMU1
R3HCC1
ARHGAP19
ZKSCAN2
ZNF461
ZKSCAN8
SPAG9
RALBP1
ZNF529
TYW3
CRYZ
NUDT5
CDC123
PCDH9
DYNC2LI1
SUMF1
CBWD5
CBWD3
GASK1A
CCNT1
PPIL3
NIF3L1
GMEB2
ZNF331
LTA4H
IPO13
FDXACB1
C11orf1
ZNF839
TMEM33
TRUB2
COQ4
VPS13B
C15orf40
TMEM138
CYB561A3
FITM2
FBXL17
ST6GALNAC2
SEM1
HSD17B6
GOT2
EPN1
NEK2
PPWD1
CENPK
EIF2S3
CNIH3
SCCPDH
AARS2
FAM133B
FANCI
EIF3E
CCR7
PCNA
WNK1
RBM34
RAG2
IFTAP
BBS5
MLIP
FBXO38
MRPL3
MSL2
PIKFYVE
TIPARP
DNAJC16
CASP9
MRPS16
MDM4
NOLC1
ZNF33B
DPH6
LMO7
TXNDC12
BTF3L4
PUM1
H4C8
DNAJB13
PPP4R3B
COX18
PLEKHA3
FKBP7
ETFDH
C4orf46
MRPL54
APBA3
THRAP3
C2orf42
GAR1
TSG101
EDEM3
NDUFS3
KBTBD4
NDUFC2-KCTD14
NDUFC2
CUL2
PSMA1
UFC1
RNF207
GCLM
RCAN2
VPS33A
SHC3
SNX5
MGME1
CTH
MDP1
CHMP4A
NOXO1
GFER
CNOT2
IMPACT
MAP2K7
GNE
TAFA3
PPM1J
DUS3L
MBOAT4
SRSF7
TMEM79
SMG5
ZBTB45
DHRS13
RARRES1
TMEM69
GPBP1L1
LOC100421372
HSPA14
CDNF
NDUFB2
RNF182
MRPL42
TTC37
ARSK
NAT10
ROBO3
DUS2
DDX28
DNAI3
ZNF362
SYMPK
FOXA3
DPP9
HSPE1-MOB4
HSPE1
HSPD1
PSMD3
CACNG1
OGT
FAM71E1
EMC10
ATP5MF-PTCD1
ATP5MF
TRIM59
CMSS1
HLCS
CNTRL
C5
BCL2L13
NSUN4
ZNF23
KIF15
KIAA1143
C16orf92
LYRM2
PLAC8
ZNF184
RCCD1
DCUN1D5
TFIP11
HNRNPR
TXLNG
MXD3
PHTF1
CALCB
RBM33
FBXO31
ZNF577
CLEC12A
C18orf21
HIP1
GCFC2
CATSPERE
CCDC77
COL14A1
C1orf53
CYP27B1