ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
OBSCN
PI4K2B
CYB5R4
SMCO1
ZNF550
BSDC1
ITGB3BP
EFCAB7
ZWINT
APOC3
APOA1
ZNF555
CCDC200
MID2
C19orf18
WDR33
ZNHIT6
WDR74
STX5
ZSCAN32
ZNF174
ZNF514
FGD3
IFNAR2
ZNF24
AADACL4
TSPAN5
SRPRB
INKA2
DDX20
SMYD3
DEGS2
KRBA1
AKR7A3
YPEL3
TBX6
LDHD
ZSCAN31
UBE2F
TTLL1
RRAGB
ZNF134
MAMDC2
SNX11
CBX1
ZBTB26
RABGAP1
OPRL1
RGS19
LKAAEAR1
F2RL3
ZFP30
SELENBP1
UQCRC1
TMEM89
DISP1
STC1
TMEM161A
SAMD14
NXPE4
ZNF32
CPLX1
GBA
ZNF572
LCN8
LCN15
LCN6
ZNF829
ZNF568
KAT6B
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
ANO9
PTDSS2
MRPL55
TBC1D22A
ZNF623
FRMPD4
EDF1
PRSS38
MTF2
TSKU
IL22RA2
ST20-MTHFS
SAMD4B
GMFG
SF3A3
DUX4
ZNF501
ZNF502
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
KRTAP5-2
RNF187
KRTAP5-1
ZNF433
ZNF878
COL23A1
ZNF891
ZNF10
TMEM229B
PTPRN2
TEAD2
DKKL1
GRAMD4
CANT1
C1QTNF1
RPL12
LRSAM1
CDCA7
ZNF3
COX16
ZNF527
DHRS2
ABLIM2
C10orf143
UTP3
GTPBP4
NKX1-1
CLTB
NUF2
ZNF726
ZNF300
ATP5F1B
ZNF792
DBNDD2
CFHR4
MROH7
TMEM109
TMEM132A
IER3IP1
NT5C3A
COL18A1
PRKACB
YY1AP1
DAP3
GPR35
ZNF292
GLT6D1
GALNT1
ZSCAN22
TBC1D19
ATP5MC2
ZBTB8B
ZNF404
EIF4A3
FN3K
FAM209A
PXDN
RPS7
MYOG
ZNFX1
ZNF426
TRMT5
SLC38A6
ZNF83
ZNF566
ARL4D
ACTL8
SOD2
WTAP
ANP32D
VARS2
GTF2H4
ATP5MF-PTCD1
ATP5MF
NRARP
TOMM20
TMEM41A
SSBP1
ID2
RWDD1
MMEL1
CCDC174
MRPS33
TSFM
SUCLG1
LOC100289561
TARS2
ATP1A1
IGFALS
HTR5A
RNF125
NEMF
SELENOH
RPIA
MAN2A1
EPHA3
SLC24A1
NTSR2
ZNF165
PLA2G4E
ZBED9
RERE
GPBP1
TLE7
SNX20
CAT
C4B_2
C4B
LOC110384692
C4A
ZNF772
TTI2
RTP5
GPRC5C
CEP85L
ZNF570
ZNF569
PRRT1B
ACTRT3
MYNN
SLC28A2
PNMA3
ZSCAN18
ZNF416
ZNF117
ATF7IP2
MAST4
SLC1A7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NBPF1
NUDT14
MED23
TRIP4
PCLAF
VPS13D
PHGDH
CWC25
DPYSL2
PNMA2
TIGD2
SLC45A4
DMAP1
SLC43A2
ZNF662
MRPL1
ZNF790
CCL24
FBXW7
ZNF75D
MKLN1
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
MNAT1
MIPOL1
GTF2H2C_2
GTF2H2C
CAPN11
LMBR1
C1orf159
TRIM41
OSGIN1
BRAP
ACAD10
ZNF614
FAM71E1
P2RX2
LRCOL1
EPB41L2
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
SERPINA3
YJU2
CYC1
GPAA1
EXOSC4
MLPH
NOX5
LARP1
TNXB
ARHGAP39
PDCD6IP
MTR
ZNF350
COX6A1
PEX7
MMS22L
SNRPE
FAM13A
ITSN1
CRYZL1
BPIFB3
FDX1
PLAGL1
CDC5L
C2orf88
C2orf69
PDE1A
GALNTL5
TESK2
MMACHC
CCDC130
MAIP1
ZNF879
TXLNB
JMJD1C
TDP2
ACOT13
CAPN8
TFF1
TFF2
FAM184A
PRAMEF1
SMG7
RAB18
RAB30
ERN2
PAFAH2
BANP
ZNF226
TLR2
TMEM242
TTC32
DNM1L
RNF217
HDAC2
SUMO3
TTC26
FGFBP3
PPIH
RBBP9
SIKE1
RSU1
TMEM44
POM121
B3GNTL1
IFIT1
PAXBP1
FRA10AC1
DNAJB12
CDT1
PRRG2
NOSIP
APRT
PPRC1
FAM193B
SKP2
LMBRD2
MRPL48
TEDC1
CRIP1
CRIP2
ACP6
NME1
FAIM
TARS3
HECTD4
ZMPSTE24
TMCO2
CYP46A1
PDGFD
RAB5IF
RIOK2
SLC30A7
EXTL2
TMEM14C
ZNF454
LRRC49
THAP10
ZNF594
RUNDC3B
GCGR
TMEM38A
SMIM7
ZSCAN30
KDM3A
METTL25
CCDC59
STAT3
MRPS18C
HELQ
TATDN2
EIF2D
NEU1
LURAP1L
SAR1B
RTTN
CLEC18A
LRFN3
ZNF135
CHCHD6
PDXK
PNPO
POMGNT1
LURAP1
TMEM125
TACO1
REEP3
NARS2
ZBTB33
HAX1
IARS1
SLC33A1
CD14
BMS1
SIT1
CCDC107
ARHGEF39
TFPT
PRPF31
GABPB2
RCAN1
LIMK1
SLC35E3
TM9SF3
MMP8
CTAG1B
CTAG1A
ZNF391
MS4A10
SMIM13
MRPS14
CCNB1IP1
PARP2
MYH2
PER3
CD2
SAMD7
MACROD1
RANBP2
SLITRK5
DDX43
CYP4F22
MRPS23
ZNF540
ZNF571
HEXA
GALK2
PARK7
POLR3B
COPS2
WDR70
NUP155
TPM4
TRMO
ATP6V0E2
ZNF687
RPL27
IFI35
DEK
POLDIP3
REXO4
ADAMTS13
FAM120B
TMEM43
CHCHD4
RBM45
RPS3A
NOTCH2
CALCRL
BAIAP2
OR1F12
STOML2
FAM214B
PUS10
PEX13
PIGO
LRRC29
RPA2
GOSR1
ZNF354A
SYT1
SNCG
MMRN2
ZNF708
MANEA
EXOC6
TMPRSS12
KANSL3
FER1L5
BORCS6
MYO1H
WDR11
METAP1D
CDK19
AMD1
TRAF3IP3
GORASP2
DSTYK
SEMA3D
NECAP2
PIH1D2
NKAPD1
RIF1
SAMD1
C19orf67
TTLL12
ZNF491
ZNF440
IL36B
AFAP1
IL36RN
PRKCZ
SLC25A53
FAM199X
SLC3A2
MT1HL1
MYLK
SGMS2
SYNPO2
CACNA1H
NRL
DCAF11
TMEM259
CNN2
CCNL1
SLC2A8
THUMPD1
DIO2
DCP1A
TM9SF2
NCOA7
MOB4
NME4
DECR2
REN
PGAP6
ZBTB8OS
RBBP4
PKIB
ABHD10
SERINC1
AURKAIP1
TEFM
CUL5
SURF2
SURF1
RPL7A
MED22
SULT1C2
MSH3
DHFR
MTRNR2L2
NUP54
EPRS1
INTS2
RPS13
GYG2
METTL7A
SDR42E1
CLPTM1
APOC2
SLC35B4
RNF148
RNF133
ZNF324B
ZNF132
SPATA33
ZNF613
CDC73
POLG
TIGD1
EIF4E2
RRP1
MAP3K4
SPACA3
PNPLA7
MRPL41
RPS29
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
BORCS7
DCLRE1B
AP4B1
ZNF20
E2F2
VPS45
IGFL3
SARS2
MRPS12
ZNF556
PPIP5K2
COX7A2
STAT1
GTPBP3
ANO8
NUP107
SLAIN1
TTC7B
STX16
ATL1
MRPL30
MITD1
ZNF841
SLC35A3
SNRPD1
SCAMP2
C1orf105
PIGC
ECHDC1
LUC7L2
FMC1-LUC7L2
FMC1
EPB41
TMEM114
ZNF791
ZNF490
GABRR2
PCDH15
LBP
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
SLC6A18
ARHGEF16
RHOT1
FGL2
MSRA
KRR1
DYNLRB2
MRS2
TTC3
TOGARAM1
KLHL28
PKLR
FDPS
SLTM
LRP6
CRLF2
KRTAP10-9
DCT
EFHD1
SF3B5
THEM4
OR4K17
SMIM31
TAF12
EFHD2
COPS4
HSPA6
SIPA1L2
N6AMT1
TRIM46
KRTCAP2
RPL27A
PRDX6
APOBEC3B
HACD2
ZKSCAN7
EAPP
FKBP9
TEX50
RPL37
CARD6
RPS14
DRG2
KCNMA1
SPANXB1
MIER1
DNAI4
EP400
KRTAP13-3
EXO1
NECAB2
PPIG
SMIM12
GSTA4
ZMYND8
NOL12
FAM13B
TRUB1
PLA2R1
NOS3
SEL1L
POLR1F
STXBP3
ZNF793
PFKP
SLC2A7
OAZ3
STX18
EIF3F
CCDC97
ZNF385A
UBOX5
FASTKD5
ATG5
CCDC33
CLEC18B
LAMTOR5
PIP4P1
OSGEP
APEX1
SPG7
PDP1
METTL8
DCAF17
TAS2R39
LRP5L
WDR36
SGPP1
ZNF383
ZNF56
ZNF263
METTL9
SPRR2F
TMEM107
P2RX6
ZNF585B
RPS12
PHRF1
LRRC59
RTL10
GNB1L
CDKL2
ZNF443
TMEM262
LIMS2
CDK5RAP1
IQGAP1
PRDM1
CSNK1E
RGS18
PSMD8
ACYP2
PLK2
ST6GALNAC6
ADNP
TGFBR2
TMEM72
CLDN16
FOXO3B
HAPLN2
USP45
TSTD3
FBXO44
TCHH
SLC30A5
MOB1A
FBXO2
MUC3A
MINDY3
TBL1X
ARID1A
HMOX2
NMRAL1
HIGD2B
BBS4
SRP54
ERMARD
ACTRT2
IRAK2
IFI6
LMTK2
LPIN1
ATF7IP
DCP1B
POLR3G
MBLAC2
SUPT3H
CHEK1
PXMP2
POLE
SNX14
ALG10
ALG14
ZNF561
UBR2
TAF4
GPN2
PKP3
ZBTB22
TAPBP
DAXX
SMIM40
FAM234B
CLIC3
ZBTB44
ZKSCAN3
ALDH9A1
IFNAR1
TPR
ODR4
MTMR9
CCDC120
CLN5
DPYSL3
USP21
DHX16
CPPED1
GDNF
NUP205
DOK3
DDX41
TRDMT1
PPOX
ZNF846
GABPA
ATP5PF
FCGR3A
HBS1L
ADCY10
NARF
ARHGAP45
CYBC1
C3orf14
CALD1
BRF2
ATG4C
GRPEL2
B4GALNT2
GOLGA5
SSTR5
TMEM106B
CCDC124
SLC2A4
H2BU1
H2AW
LRP3
VAX1
INPP4B
SULT1C3
TPK1
PHIP
TIAM1
SRP9
FOXP1
GPR137
DNAJC19
WBP11
C12orf60
ELAC1
MAD1L1
SLC17A5
C8orf37
RIMBP3C
RIMBP3B
CRNKL1
CFAP61
ZNF335
MRPL24
CHD1
ACY3
FAAH
CNIH4
SNIP1
DNALI1
DHTKD1
PNISR
ETNK1
FANCC
PLS1
GTF2B
TRMT11
RSL24D1
NMT2
TAAR5
ASCC1
ANAPC16
GOLPH3L
PDE4DIP
TIMELESS
SUPT7L
SLC4A1AP
ENG
ZSCAN25
TMEM101
WBP1
INO80B
SYF2
SYNCRIP
RGS21
SAP130
TMBIM4
MTIF2
PES1
LOC102724265
HEATR1
LGR5
DNAJC24
DCDC1
ZNF189
MRPL50
IRF9
SEC23B
HP
TAF13
LOC100129484
ANKRD36B
TNRC18
C20orf203
CERCAM
DUSP12
MIR1-1HG
MRPS16
ST3GAL5
CEP85
LRP5
HMGB1
USPL1
TNPO3
ABCB10
PLCH1
SLC25A21
EIF3D
C6orf47
BAG6
APOM
RUFY4
SLC25A44
CYP17A1
ZNF285
VTA1
NMBR
PRR4
CATIP
UCHL3
COMMD6
ARL14EP
PRAMEF14
PRAMEF13
TMEM116
ERP29
INSYN2B
TM9SF1
RAD54L2
IPO4
ZNF408
ARHGAP1
DND1
WDR55
ARID3B
ABCA3
COG2
GRM4
UBE3B
KCTD10
LGALS8
DEDD
MICU2
KLHL32
CDR2L
CYCS
HID1
ADGRF1
JOSD1
GTPBP1
ZNF143
COMT
TXNRD2
SEC22B
TXN2
LSM5
AVL9
IMP4
CCDC115
UBE2L3
TGM6
ATG101
SMIM41
MFSD8
ABHD18
HECTD1
WNK4
VPS25
RNF144B
ZNF589
CFAP20
C6orf89
FBXO28
OSGEPL1
PPIL1
ELFN2
ZCWPW2
AZI2
HIPK1
SMAD3
MRPL45
PARPBP
NUP37
IPO7
PBX3
KLF16
EXOSC10
UBE2D3
CISD2
OPA1