ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
NPY4R
NPY4R2
RBBP8NL
HOXB4
HOXB3
ABR
OR10V1
ZNF76
CYP2R1
CEBPG
PKDCC
COG1
PLRG1
FGB
C20orf204
ACVR1B
SPOCK2
HOXA3
RALB
TSPAN3
CREB3L1
ISX
HES1
GATA6
PCED1B
AMIGO2
KCNE3
ANKRD40CL
CD300LF
GRAMD1A
PRR15L
CDK5RAP3
C1orf100
ID1
STX16
MGAM
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
RDX
JOSD1
GPR84
WSB2
USH1C
OTOG
MYEOV
KRTAP3-2
KRTAP3-1
IGSF23
RARB
NEK2
LRRC69
HKDC1
PRSS41
TACR2
KRT8
CA4
RNPEP
ITLN2
NTF3
PPP1R14A
CD244
TOMM40L
APOA2
FCER1G
HK1
LRRC59
TNFAIP8
PDGFRB
CDX1
CHST7
CDK5RAP1
SMIM3
MAGEA11
NT5DC4
PMEPA1
PLAUR
GSTP1
TCF20
EML1
GNPAT
C1orf131
STARD10
RBM39
CHI3L1
PRICKLE1
ATXN1
DCAF6
MAPK10
EPRS1
HOXC6
HOXC5
ZBTB38
TBX4
SLC2A8
SLC6A7
RGS9BP
ANKRD27
RTN1
ARHGEF12
FKBP1A
INTS9
HMBOX1
PADI2
MORC1
ZMIZ1
SULT2B1
ABHD11
PI3
ZBTB45
SLC27A5
TMEM262
TMEM106C
TDRD7
SCT
IRF7
CDHR5
ZNF501
MALRD1
NAV2
GPR171
STX1A
PIGR
KRAS
CEACAM5
RHOH
SLC45A4
PIK3AP1
HOXC4
HOXC8
CERK
MRPL44
MEP1A
GUCY2C
SLCO2B1
CCDC90B
MICAL2
STAT3
ZNF117
ERV3-1-ZNF117
ERV3-1
KRTAP9-1
KRTAP4-2
KRTAP4-1
EPAS1
ATF3
PLEKHG3
PTCD1
CPSF4
WDR74
STX5
OR9Q2
REG3A
ADNP
FAM111A
THUMPD3
UBR2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CXCL2
RGS2
TOR1B
NUF2
FGG
TWF1
PRLR
PLEKHM3
ATP10B
GLYATL1
TUT1
MTA2
C1GALT1
ADAP1
CASC3
COL21A1
MAMDC2
RIN2
KCTD5
DNASE1
WFDC9
WFDC10A
RBM47
BCAS1
HAND1
GFOD2
ZNF226
WWC2
ABCB1
METTL15
KIF18A
MUC3A
TEFM
APOLD1
PSMB5
SYBU
HOXC10
HOXC11
ASB2
PNLDC1
ZNF169
LECT2
POMT2
GSTZ1
PTCHD1
PIK3C2A
TATDN3
NSL1
SFRP2
STAT1
ZSCAN9
ZNF512B
SAMD10
HERPUD1
DEPP1
PFKP
LOC102723996
ICOSLG
FBXO31
IL34
MAP1LC3B
NCOA5
ZGPAT
ARFRP1
DUSP18
MRPS16
DNAJC9
LCT
TMEM109
PRPF19
SPATA46
C1orf226
LRP2
PAK1
EPHB2
C3orf52
ALG10
RFLNA
ZNRF3
ITPK1
AKR1E2
CEACAM16
NFAT5
MRPS23
GPA33
SPOP
ARL14
EAPP
GRAMD2B
PRELID3B
SYCP2
PPP1R3D
FAM217B
HNF4A
HOXB9
TRIM2
MIDEAS
PLXNC1
STAT6
C2orf88
PMF1-BGLAP
PMF1
NR5A2
AJUBA
SLA
BHLHE40
NNMT
MIA3
INTS4
MRPL53
MOGS
REG4
SLC12A3
CNNM3
SMTN
NECTIN4
EPCAM
TMPRSS4
SMIM35
SLC35D2
SPRED2
MYRF
RHEBL1
KMT2D
OR6V1
YWHAB
COL23A1
GALNT11
TRMT61B
ACOX2
TFEC
GBA
TM9SF4
CFAP69
ELF3
WDR36
MRPL21
IGHMBP2
ZNF552
GINS1
ABHD12
TOB1
CALM2
CHPT1
PRSS33
CCT5
ATPSCKMT
SLC17A9
CEBPA
TFPT
PRPF31
AFF1
TESK2
MMACHC
BCL2L1
COX5A
SLC30A10
B3GNT6
CCNL1
ATE1
SLCO4A1
TMEM248
MT1F
MT1B
MACC1
PAPSS1
PDE4DIP
THAP1
ZNF3
COPS6
ALG10B
DCP1A
WDFY1
BANP
USP30
CTNNBL1
SLC20A1
MARK2
PEX3
ADAT2
ADARB1
ZFYVE26
RAD51B
BBS1
POTEI
CFC1B
EIF4G3
CTSK
MAIP1
ERICH5
MGAT4A
FCRLA
EDN3
NOS2
SCN1B
HPN
HIBADH
SMG7
HEPH
ANKDD1B
NPAS4
UQCC3
UBXN1
LBHD1
RAB3C
TMEM60
PHTF2
URGCP
URGCP-MRPS24
PPIAL4H
PPIAL4G
KPNB1
BCAS4
TMEM126B
DLG2
CDH18
RIC8B
SLC25A44
KCNIP2
LRRC4
H4C12
H4C11
H2BC15
H2AC15
DDX23
WWC1
TPX2
VSIR
TARBP2
NPFF
MAP3K12
CHST3
RGPD2
RGPD1
ZNF341
TATDN1
NDUFB9
UBB
PIGZ
SOX30
C5orf52
PRRT2
MAZ
RBBP5
PDE6A
FAM107B
GSDMB
SLC30A4
PGP
E4F1
S100A2
ZNF513
SNX17
EIF2B4
IQSEC3
DNAAF2
PTPRF
POTEJ
CFC1
ACOT1
NDUFS7
ARL4D
PITPNM1
HEXB
GCNT4
CAPN5
PCK1
HOXB5
COL12A1
TMEM69
GPBP1L1
DAGLB
SDHAF3
GYS2
ARHGAP32
MUS81
CFL1
KMT2E
VILL
ZNF248
CRLS1
MRPS14
NSMCE1
CRYBA4
BAHCC1
EMP1
MRPL3
SPAM1
CXCL5
CAPN2
SLC51B
PRPF18
SIPA1L2
IL1R1
TLCD1
SAMD5
RPL23A
RAB34
PROCA1
NEK8
EPS8
RPS7
TMEM141
CCDC183
VIPAS39
AHSA1
PRKAG2
ACIN1
VAV3
MTERF4
G3BP1
DCAF8L1
RNF114
ARHGEF18
NPIPB15
MRPS10
ZNF770
AP3B1
ANK3
SNTB1
POLR2J2
NCOA3
CFAP20
SEBOX
TMEM199
POLDIP2
DDI1
ALKBH3
SIRT4
LRIG3
CHMP3
COX16
PPIP5K2
KIF5B
CDX2
HACD2
URAD
NFKBIZ
ARHGDIB
LDHAL6A
BCL9
EIF3F
TSR3
NR1H3
GNPTG
ACP2
LGALS4
TOB2
DYNLT3
PGF
ATXN2L
AKNAD1
EPB41L1
CCND1
MARCHF8
SLC12A2
ARHGAP45
PDPR
KIF3B
JMJD1C
COG3
GTF2H2
DLX4
MBL2
CDCA3
TRIM48
RPS9
ZNF207
SREK1IP1
PGAP3
ERBB2
CWC27
C17orf75
ARHGAP27
SEMA7A
PLD3
C19orf47
SAR1B
DENND1A
KRT19
ZNF721
PIGG
KBTBD8
TUFT1
PLEKHG6
NODAL
KRT15
TNFSF15
CARD10
METTL25
CCDC59
BMF
RNF32
DTX4
CDR2
TMEM38B
TACO1
PPIAL4C
PPIAL4A
MCF2L
MANSC1
BORCS5
ANKRD33
ST6GALNAC6
ST6GALNAC4
SLC18A1
MYBL2
HERPUD2
FRA10AC1
TTBK2
IFRD1
MOB4
SCAND1
SLC33A1
TNFAIP1
NUGGC
IFT20
ELP3
COL5A2
MAST2
TBL1X
CARD16
C1orf116
ATP2B4
AGT
RNF7
TMEM123
CXXC5
CHKA
NR1D1
MRTFA
NOTCH2
DUX4
LMO7
UBAP2L
C1orf43
INTS6
RAB6D
RNASE6
CASP4
DCUN1D2
FUT2
FXYD2
GATM
PTH
SH3D19
CHST5
FABP1
IRF2BP2
TMC7
SNX19
SLC3A2
FAM20A
EPC2
KIAA2012
ZNF384
RANBP2
IRAG1
CPHXL
HPS6
ARMH3
SIN3A
PIGU
NECTIN1
CKAP5
INPP1
MTF2
TFRC
SH3RF2
NDUFC2-KCTD14
NDUFC2
FASTKD1
HOXC9
GULP1
BUD13
PKP4
CCDC148
GTF2IRD2
S100A10
POLD4
AKAP9
SLC25A16
SF3B2
GAL3ST3
MTRNR2L1
SQSTM1
KRR1
KBTBD7
H4C4
H3C4
H2BC6
RAPGEFL1
GSTO1
ZCCHC8
PITX2
ADGRE5
GPATCH1
ZFP36L1
TSPAN32
C11orf21
SC5D
ART1
ZHX3
DOCK6
USPL1
HMGB1
PAX8
FOCAD
MYL6B
MYL6
SMUG1
RPL37
MMP15
CARD6
LUC7L3
ARIH1
ZSCAN32
ZNF174
SRGAP1
C11orf65
TTC13
ARV1
SMIM30
RALGAPB
DPY19L4
RNF145
CLIC5
ADGRG1
ABCC3
WDR89
STK31
NXPH2
TULP4
TEAD4
SLC25A36
PRRC2C
MRPS33
KDM5B
EHBP1
DGCR6L
CTDP1
CPNE6
ABT1
MBTPS2
SCNN1A
LTBR
ZNRF1
WDR59
ZFP36L2
ZFHX3
PBLD
OGDHL
NCBP3
HNRNPH3
FABP7
CDC14A
YAP1
ZFP62
ZSWIM1
SPIB
SPATA25
NEURL2
MRPL2
KLC4
CUL7
CTSA
ANXA4
RNF44
CDHR2
DAGLA
TMEM242
WDR97
TAS2R19
SNRPC
SLC30A6
PDE6D
MAF1
FBXO28
CYC1
COPS7B
LIMA1
ZNF503
SUPT7L
SLC4A1AP
SV2A
DSTYK
BOLA1
LAMB3
TSPAN8
SIX1
ZNF746
TSSC4
MTG1
GTPBP4
AGR2
SLC7A5
VTA1
NMBR
BLOC1S6
AQP11
ARHGEF28
SDC4
TYMSOS
TYMS
SLC29A4
FANCD2
ACHE
SP2
SURF6
MED23
IGFL4
CALML4
OGT
ZNF510
ZNF749
PGLYRP1
FAM227B
DTWD1
TRPC3
CLDN12
SYMPK
FOXA3
GTF3C3
C2orf66
FURIN
CPLX2
INTS5
GANAB
CEP126
ANGPTL5
CXCL17
UGT8
TEX46
SMARCD1
PRORP
PPP2R3C
LIPE
KDM1A
ASIC1
AAR2
ATP9A
IDH1
SLC46A1
TMEM167B
PLIN2
OTUD6B
GSK3A
TRIB3
TJP3
PTDSS2
PDZK1
NOL4L
ITIH2
ARFGAP1
ANO9
UBE2V2
CLPB
RCE1
PTEN
PPP1R35
KLLN
EXD2
DIDO1
ANKRD13D
NEK10
RAB5B
PMEL
CDK2
PRDM11
SF3B5
HTR3B
LGALS3
CTSB
LASP1
HEPACAM2
PPIL1
C6orf89
OPA1
RPS5
DENND4A
VPS50
POFUT1
PLAGL2
ADAMTS9
DESI2
CDC42BPA
PTP4A1
MRPL30
MITD1
STT3A
CHCHD3
ARL8B
HSD17B4
FAM131B
SELENON
PDSS2
INTS12
GSTCD
EPHA10
TMEM107
ATP8B1
NUDC
NR0B2
SPINT1
SPRING1
RNFT2
LYPD6B
PRKG1
LTN1
SERPIND1
TTLL6
VIL1
NMNAT1
LZIC
SCAF1
RRAS
CYCS
MROH7
POLR2J3
ABCB9
OGFOD2
ARL6IP4
SLC35E3
NAA20
CREBL2
CDKN1B
AGPAT2
MATR3
PHYKPL
TYRO3
HOOK2
HNF4G
ETV4
TMEM97
WDPCP
NAGK
MDH1
GALNT5
RBM25
PDXK
ZNF337
A2M
CXCL9
ART3
GCG
NOSTRIN
FNIP2
CCDC88A
FGF1
ZNF577
ZNF789
RTTN
ATP5MF-PTCD1
ATP5MF
ZC3H15
RAB5IF
OVOL1
EIF1AD
CST6
BANF1
AP5B1
ZNF91
ZW10
CLDN25
KANSL3
FER1L5
PLA2G1B
HAVCR1
CUBN
DCAF8L2
SELENOP
OR10AD1
KIFBP
SEMA4G
PSENEN
PROSER3
LIN37
LHPP
IGFLR1
HSPB6
DMAP1
SEC23A
FCMR
EFNA1
CRBN
SLC50A1
ZNF30
LGMN
FGA
DEXI
CLTC
CLEC16A
AMACR
PLEKHG1
AMOTL2
TIMM10B
DNHD1
SNX5
MGME1
KLB
GTF2H2C
GTF2H2C_2
TIMM23B
TAMM41
RESF1
PDP2
PARG
ORMDL3
KEL
FAM98B
SLC25A13
MKRN2OS
MKRN2
TMEM230
PCNA
TOP3B
CTU1
RPS3A
TBC1D19
STMN3
RTEL1
PUS7L
PSAP
IRAK4
TRIM15
TRIM10
OPTN
CCDC3
OIP5
NUSAP1
YAE1
NRCAM
CMTR2
TIMP3
PROCR
MRPL38