ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ CDX2: STRING

SNX12
KMT2A
ZFP64
ZNF76
ISX
HES1
ANKRD40CL
STX16
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
KRTAP3-1
NEK2
RNPEP
APOA2
HK1
LRRC59
CDK5RAP1
TCF20
RBM39
EPRS1
HOXC5
ARHGEF12
INTS9
HMBOX1
PI3
ZBTB45
CDHR5
ZNF501
MALRD1
RHOH
SLC45A4
PIK3AP1
HOXC6
HOXC4
MRPL44
GUCY2C
CCDC90B
STAT3
ATF3
WDR74
ADNP
UBR2
CXCL2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NUF2
TUT1
ADAP1
CASC3
HOXB4
KCTD5
RBM47
ZNF226
TEFM
PIK3C2A
TATDN3
NSL1
ZNF512B
DEPP1
NCOA5
ZGPAT
ARFRP1
DUSP18
MRPS16
PRPF19
C1orf226
LRP2
ALG10
AKR1E2
NFAT5
SPOP
GRAMD2B
PPP1R3D
FAM217B
TRIM2
HNF4A
STAT6
AJUBA
NR5A2
NNMT
MIA3
INTS4
MRPL53
TMPRSS4
KMT2D
YWHAB
TRMT61B
ACOX2
GBA
TM9SF4
CFAP69
MRPL21
IGHMBP2
WDR36
TOB1
CALM2
CHPT1
TFPT
PRPF31
MMACHC
SLC30A10
CCNL1
TMEM248
THAP1
ALG10B
DCP1A
BANP
USP30
CTNNBL1
MARK2
PEX3
ADAT2
ADARB1
RAD51B
BBS1
MAIP1
MGAT4A
HPN
HIBADH
HEPH
SMG7
NPAS4
UBXN1
RAB3C
TMEM60
PHTF2
KPNB1
TMEM126B
DLG2
MEP1A
RIC8B
H4C12
DDX23
TPX2
TARBP2
ZNF341
UBB
SOX30
C5orf52
MAZ
RBBP5
GSDMB
SLC30A4
E4F1
S100A2
SNX17
EIF2B4
IQSEC3
ACOT1
NDUFS7
GCNT4
PCK1
HOXB3
TMEM69
GPBP1L1
DAGLB
SDHAF3
VILL
ZNF248
PLEKHM3
CRLS1
MRPS14
EMP1
MRPL3
SLC51B
PRPF18
RPL23A
RPS7
VIPAS39
AHSA1
MTERF4
G3BP1
ZNF770
AP3B1
ANK3
NCOA3
TMEM199
POLDIP2
CFAP20
ALKBH3
SIRT4
COX16
PPIP5K2
HACD2
ARHGDIB
EIF3F
TSR3
NR1H3
GNPTG
BCL9
ACP2
TOB2
DYNLT3
ATXN2L
ARHGAP45
MARCHF8
PDPR
KIF3B
JMJD1C
GTF2H2
SREK1IP1
CWC27
C17orf75
ARHGAP27
PLD3
C19orf47
ZNF721
PIGG
STAT1
KBTBD8
PLEKHG6
NODAL
METTL25
CCDC59
BMF
TACO1
MANSC1
SLC18A1
HERPUD2
FRA10AC1
TTBK2
IFRD1
MOB4
SCAND1
SLC33A1
ELP3
TNFAIP1
IFT20
COL5A2
TBL1X
ATP2B4
TMEM123
RNF7
NR1D1
NOTCH2
CHKA
LMO7
UBAP2L
C1orf43
INTS6
HOXB9
CASP4
SH3D19
SNX19
EPC2
ZNF384
RANBP2
ARMH3
PIGU
CKAP5
MTF2
TFRC
SH3RF2
NDUFC2-KCTD14
NDUFC2
FASTKD1
BUD13
PKP4
GULP1
GTF2IRD2
SLC25A16
SF3B2
AKAP9
KRR1
KBTBD7
H4C4
RAPGEFL1
GSTO1
DNASE1
ZCCHC8
ADGRE5
SC5D
USPL1
HMGB1
MYL6B
SMUG1
RPL37
MMP15
ARIH1
ZSCAN32
ZNF174
C11orf65
SMIM30
RALGAPB
DPY19L4
RNF145
ADGRG1
STK31
TEAD4
WDR89
SLC25A36
PRRC2C
MRPS33
EHBP1
DGCR6L
CTDP1
ABT1
MBTPS2
ZFHX3
PBLD
OGDHL
HNRNPH3
SPRED2
YAP1
ZFP62
NEURL2
CUL7
CTSA
TMEM242
SNRPC
SLC30A6
MAF1
FBXO28
COPS7B
LIMA1
SUPT7L
SLC4A1AP
DSTYK
BOLA1
TSSC4
SLCO2B1
MTG1
AGR2
VTA1
NMBR
BLOC1S6
AQP11
TYMSOS
TYMS
FANCD2
ARHGEF28
SP2
SURF6
MED23
CALML4
ZNF510
OGT
ZNF749
FAM227B
DTWD1
SYMPK
GTF3C3
FOXA3
CLDN12
INTS5
FURIN
PRORP
PPP2R3C
KDM1A
AAR2
IDH1
SLC46A1
TMEM167B
PLIN2
OTUD6B
GSK3A
TJP3
PTDSS2
ARFGAP1
CLPB
RCE1
EXD2
DIDO1
ANKRD13D
RAB5B
SF3B5
PRDM11
CTSB
PPIL1
OPA1
VPS50
HEPACAM2
POFUT1
PLAGL2
LASP1
DENND4A
MRPL30
MITD1
STT3A
CHCHD3
CDC42BPA
ARL8B
SAR1B
PDSS2
INTS12
HSD17B4
GSTCD
NR0B2
LTN1
NMNAT1
LZIC
SCAF1
CYCS
POLR2J3
OGFOD2
SLC35E3
CREBL2
APOLD1
HOOK2
WDPCP
TMEM97
NAGK
MDH1
ETV4
RBM25
ZNF337
NOSTRIN
ZNF577
RTTN
ZC3H15
CCDC88A
ATP5MF-PTCD1
ATP5MF
RAB5IF
EIF1AD
BANF1
ZW10
KANSL3
SELENOP
KIFBP
LIN37
DMAP1
SEC23A
CRBN
LGMN
CLTC
CLEC16A
AMOTL2
SNX5
MGME1
KLB
GTF2H2C
GTF2H2C_2
TIMM23B
TAMM41
RESF1
PLEKHG1
PARG
ORMDL3
FAM98B
MKRN2
TMEM230
TOP3B
CTU1
TBC1D19
RTEL1
RPS3A
PUS7L
PSAP
IRAK4
TRIM15
OIP5
NUSAP1
YAE1
KDM5B
CMTR2
DCTN3
PALD1
CNOT1
BAX
ZNF233
TTC36
PEX12
ZSWIM3
ACOT8
ZBTB20
PPP1R12C
MRPL40
HIRA
STAU1
SHANK2
RPL24
LY6G6D
FGFR4
PSMD3
AURKAIP1
NDUFV1
SLC24A1
RSAD1
NRBF2
BMPR1A
ARID4A
MRPS17
ATL3
ARNT
FOXN3
ZNF805
NPHP1
IFTAP
G0S2
ATP5MC1
RNF43
TMEM41B
ZNF317
TMEM176B
TMEM176A
SNRNP70
FITM2
ATP5MPL
ZNF622
ZC3H6
UQCRFS1
RALGAPA2
MTIF2
MRM3
LARS1
JTB
GLOD4
CYP51A1
CIZ1
CCDC15
PPIL3
NIF3L1
SRP9
HOOK1
SERTAD3
TMED5
SSBP2
OVCA2
EIF4EBP2
CCDC18
CCDC186
PPME1
C2CD3
RPL27
WDR33
IST1
GPRC5A
SORL1
SELENOH
DDX46
TES
USP3
RRN3
RPUSD4
FAM118B
DDX19A
CLP1
MRPS15
CCAR2
MRPL11
ZNF235
TSC1
HNRNPAB
GFI1B
DGUOK
CCDC150
B4GALT7
MCTS1
ZMPSTE24
UGT2B7
TRIP4
ZNF212
GOT2
YWHAZ
SCNM1
LYSMD1
SRPRB
SRCAP
RPTOR
LOC730183
KLHL12
CALM1
HNMT
CSTF1
AURKA
C2CD5
AMACR
SPRING1
RNFT2
RGMB
LYPLAL1
HUS1
GATAD2A
EIF3D
YPEL5
TTPAL
SFR1
PPP1R12B
DIS3
METTL3
STAG1
RNF34
RHEB
PAAF1
GTPBP10
FNIP2
DEF8
COA4
ANXA4
UCHL5
SLC20A1
RTRAF
RO60
P4HA1
KIAA1586
AP5Z1
OTUD7B
YTHDC1
TGOLN2
LATS2
KMT5B
ZSWIM6
TVP23B
RNF214
PCSK7
MT1F
MNAT1
HTRA2
HMGCR
DYNC1I2
CEP350
RAB30
TMEM140
PKIB
ZNF211
WDR75
UBA52
PPID
PICALM
DLAT
SPRY2
REXO2
POLR1B
PHYHIPL
NUP54
CLASP1
WASHC2A
ZSCAN22
TCTA
TAF1D
RHOA
NOL7
MZT1
MVB12A
HSP90AB1
DHDDS
CDKN2AIPNL
C11orf54
BORA
BLCAP
CIAO3
UBE2V1
SPIN1
CYP2S1
FGFBP1
NFE2L2
FEM1A
MRPS31
CDK12
ZNF565
ZNF146
RBM6
POMZP3
COMMD2
C2orf42
LDHA
STX18
RCAN1
PRPF6
POLK
PAX6
NUDT5
METAP1D
FAM149B1
ECD
CERT1
CDC123
ZBTB40
ZNF17
SLC3A2
RPS26
MRPL16
HDAC2
HBS1L
FBH1
ANKRD16
KNL1
KHSRP
SH3TC2
COA1
GSDMD
EIF3K
CREBZF
THYN1
OXSM
NGLY1
FSTL3
DUS2
DNM1L
DDX28
ACAD8
SKIL
TCIRG1
RPP14
NLK
MTERF1
JRK
IARS1
HTD2
MTRNR2L8
ZNF518A
ZNF23
PRPF8
MORN4
LRRC46
DCLRE1C
CTSC
CTR9
ZNF221
SRRM3
S100A14
MDM2
CHD8
AP1G1
HEXIM2
H4C11
H4C14
KAT6A
WNK4
ZNF292
ZNF239
SERPINB6
PCNA
BDP1
BRCA1
SHF
SH3BGRL2
SMG5
LRP6
NDUFAF5
ESF1
ARF4
POGLUT3
NEU1
KDM3A
GGCX
CYLD
COMMD3-BMI1
COMMD3
AP1M1
TTI2
UBE2Z
ZFP2
ZBTB26
TRAPPC10
NUP62
MRPS18C
IL4I1
HELQ
F7
COA3
CNTD1
CHMP4B
ATF5
CEP120
NME1
ID1
VPS37B
TXNL4B
TFEC
TBPL1
STRADA
PDE8A
NCR3LG1
MAD2L1BP
GTPBP2
GTF2H4
GFM2
DNAJC9
DHX38
CAPNS1
ACVR1
MRE11
ANKRD49
PRH1-TAS2R14
PRH1
XYLB
SMIM10L1
SGF29
MDP1
FOXJ3
ENGASE
TMEM126A
SLC37A3
SEC62
PTK2B
CCNJ
CALR3
C19orf44
ALPI
MYL6
TSFM
ZNF219
ZNF461
TEN1
TAOK1
SPRED1
SLC25A13
RAB5C
LARP4
DLC1
DKK1
COMMD9
ACOX1
ABRAXAS2
YME1L1
WASHC2C
PRKAB2
PPP6R3
PLD6
MICU1
MASTL
CHD1L
CDC42
TAPBPL
ZC3HC1
GOLGA5
TIGAR
SRSF6
KCTD18
DDX1
RGPD6
RGPD5
SSNA1
RTF2
RGPD8
PAK1
CCDC117
ARL2BP
ANAPC2
CWF19L2
PDF
ELP6
DYNC2I2
CISD1
ANAPC15
UBOX5
FASTKD5
ATP5F1E
UTP25
ST3GAL6
RPS13
CD55
HAL
ZNHIT3
NDUFA5
ZDHHC5
THAP12
SULT6B1
SRPRA
NECAP1
MAP1LC3B
GVQW3
FBXO31
DNM2
CCDC66
ATAD3B
CDC14B
ZNF25
HEATR1
VTN
TMEM11
SGK2
PITRM1
MBTPS1
CBWD6
CBWD5
CBWD3
THAP10
LRRC49
IMP4
CCDC115
CLNS1A
ZNF544
ZNF33B
ZNF230
ZNF165
SYVN1
SEC13
RTN4IP1
QRSL1
OTUB1
OSER1
OSBP2
MAP3K8
KDM5A
GTF3C6
FBXO22
EMSY
CCDC77
C16orf46
AGGF1
TOMM7
PPRC1
ZNF571
ZNF56
ZNF540
UBC
TRIM40
RAB1A
RAB11A
PPIG
PNPLA6
NIPBL
FDXR
COA6
KRT8
TTC26
SUGT1
SP6
SCAMP4
ASMTL
ADAT3
DUS4L-BCAP29
DUS4L
COG5
RDH11
PREPL
NUP58
CAMKMT
RNF5
AGPAT1
VAMP5
UTP15
TSSK6
TRAF6
TRAF4
TAF3
SNX18
SMCHD1
RBM7
RAG1
NDUFA13
C11orf71
ARID2
ANKRA2
U2SURP
ZSCAN9
ZNF33A
GARS1
ZNF785
TRMT44
TIMM22
TASOR2
SCFD2
RPL10A
PNPT1
PAPOLA
MMUT
ILF3
HINT3
DYNC2H1
CENPQ
ACOX3
DUS3L
PHB2
ZNF628
ZNF37A
UTP4
UNC50
TUBG1
RETREG3
RABL6
MPHOSPH10
MCEE
FNIP1
DERPC
DDX18
CREBRF
COA5
CHTF8
TSPAN8
DNMBP
APOBEC1
CTH
WDR70
TMEM106B
TBL3
RNMT
PRKCE
MAP11
INTS1
FAM210A
ATP5MC3
ARG2
AHI1
UCP2
THRAP3
THNSL1
SUPV3L1
SKP2
RAD54L2
PPP5D1
PANK1
NRDC
NEURL4