ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SOX9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◣ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX768290: HT-29

◢ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

MAMDC2
DUX4
TRIM48
ARRDC4
MTRNR2L2
MSH3
MTRNR2L8
SNX16
DOLPP1
POR
KIF5C
ZBTB32
PTPRN2
LOC102724770
DGCR6
IQCH
AAGAB
POLG
SLC25A41
KHSRP
PARK7
RGPD2
TAF15
WDR97
MAF1
CYC1
SLC35E2B
SNAP29
PI4KA
ZNF775
CLDN9
PPIB
RNF13
MRPS24
PHRF1
AKIRIN1
TMEM160
PRR19
PAFAH1B3
HMGCS1
WDR74
STX5
FAM72C
PFDN4
SLC35E2A
KAT7
RASSF7
LMNTD2
UBE2C
RNASEH2A
PRDX2
PROSER3
LIN37
HSPB6
FAM72A
PTOV1
PMF1-BGLAP
PMF1
MYO9B
HAUS8
FAM72B
MTRNR2L1
WASL
STIP1
CIC
SMIM41
ATG101
OGA
MUC3A
HBD
HBB
ARAF
PITPNM1
CDK2AP2
SPATC1L
PLP2
MAGIX
PDXDC1
HHIPL1
CCDC85C
ZNF8
EED
UBA1
CDON
ZNF335
GNB2
BZW2
ANKMY2
ATP6V0C
AMDHD2
PIK3R3
WDR38
RPL35
ARPC5L
COL23A1
PRKDC
MCM4
HNRNPL
TOP2A
ETV2
COX6B1
MRPL20
CCNL2
USP15
PRR3
GNL1
TAF6
MBLAC1
CNPY4
UIMC1
FAM72D
TTC9B
CNTD2
PGP
E4F1
DBP
TEPSIN
NDUFAF8
SELENOW
DNMT1
UCHL3
COMMD6
MLST8
BRICD5
PRKCI
RAB4B
MIA
CNOT1
UROS
BCCIP
TMEM45A
C6orf226
RHBDD3
EWSR1
TARDBP
PSPN
ALKBH7
CDCA7L
PAXIP1
TRAPPC6B
PNN
TANGO2
ARVCF
RMND5B
METTL25
CCDC59
CNOT3
SHKBP1
HDAC1
RRM2
NUCB2
FAM83D
GIT2
ANKRD13A
SLC25A42
LIN54
ZMYM2
SP2
FUS
FANCI
NDST2
TBC1D17
PNKP
AKT1S1
ANKRD12
NCDN
KIAA0319L
MYL12A
TRIP4
PCLAF
DPP9
PTP4A2
ANP32A
LUC7L2
FAM53C
CDC25C
CASKIN1
YY1AP1
DAP3
TUBB4B
FAM166A
TNNI3
DNAAF3
PRKACA
PPP5D1
CALM3
EIF3B
CENPE
H3C15
H3C14
H2AC19
H2AC18
ZNF519
MTRNR2L9
H4C15
H4C14
ARNTL
PPP1R13L
CD3EAP
DISP3
FRAT2
GPR84
TSKS
AP2A1
MRPS11
MRPL46
LEMD2
NFYC
TIGD5
EEF1D
ATP5PD
UBE2A
CXorf56
ANKRD39
CMC2
CENPN
TRAF2
PTDSS1
MTERF3
FRG2C
PRCP
DDIAS
PPDPF
FRAT1
CBX5
FMC1-LUC7L2
FMC1
PRDM10
PMVK
SERTAD1
SYVN1
STX16
SOD2
UBE2B
CDKL3
PRKAG2
PIP4K2B
FOS
TCP11L2
SKA2
PRR11
KIF1B
MYT1
C2orf42
RPL19
CSNK2A1
CACNB1
ATG16L2
RBM42
UFSP2
C4orf47
IQCE
PIF1
PKDCC
AK2
LRCH4
FBXO24
FZR1
DOHH
RNF103-CHMP3
RMND5A
OSBPL2
BAZ2A
ATP5F1B
RPL22
RNF207
ATP8A1
SSNA1
ANAPC2
UQCRQ
SULT1A4
SULT1A3
SLX1B
SLX1A
LEAP2
GDF9
FBXO5
BOLA2B
BOLA2
MADD
PSIP1
OLFML2A
NR6A1
ISOC2
HDAC2
STPG3
BOLA2-SMG1P6
ATP5MC1
KATNB1
UFD1
CDC45
ZNF687
INAVA
HNRNPUL1
WASHC5
NSMCE2
UQCRC2
GIPC1
CSPP1
COPS5
HDGFL2
CDK16
NLK
COQ8A
KCTD7
OGDH
DGAT2
GTF2IRD2B
GTF2IRD2
ZNF574
LRPPRC
SELENOH
PANK2
KMT5C
BCL6
EFNB2
ZMYM5
SRI
MOCS3
DPM1
TSPAN4
POLR2L
CD151
SIGMAR1
GALT
UCKL1
PDK2
FOSL1
CCDC85B
WDR62
THAP8
CKAP5
PRR14
FBRS
MSANTD4
HOMEZ
GOLGA6L9
POLR2J3
PPFIA3
LIN7B
C19orf73
ALDH4A1
ATG9B
ABCB8
TMTC4
VBP1
CCT5
ATPSCKMT
TTBK2
RPN2
MROH8
ZBED6CL
RRBP1
LRRC61
ACTR3C
SLC34A3
OPA3
MTCH1
IVD
DOT1L
CANX
MRPS31
WDR45
CNFN
C6orf62
UNG
TPBG
ATP5IF1
ALKBH2
C17orf49
TMEM242
HNRNPC
GOLGA6L4
PRMT1
DIAPH1
CWC25
SUN3
RAB7A
C7orf57
RLN2
PLEKHG5
BAZ1B
KLF6
SMARCAL1
EAPP
CDK5RAP2
PPWD1
IFT52
FANCF
CENPK
MRPL21
IGHMBP2
CD164
SASH1
ARL4D
MYL12B
LIPE
ZNF484
TRPM4
HRC
RBM27
H2AZ2
ZSWIM1
SPATA25
CDIPT
PTCD3
POLR1A
ANKRD10
CNPY3
CFAP221
PLAG1
CHCHD7
USP31
CHCHD6
NDUFB1
LSR
CPSF2
SPRYD3
NOL8
CENPP
GNG3
GATAD2B
BSCL2
ARHGAP19
OSBP
ART1
ATF7-NPFF
ATF7
SF3A3
PKNOX1
TYK2
MBD1
EIF2D
CXXC1
GOLGA6L10
SMC3
SREK1IP1
EIF3F
CWC27
TMEM129
TACC3
SLBP
KANSL1
NOC4L
DDX51
CENPA
TFPT
PRPF31
FDFT1
TOM1
ZFAND4
PLXNA3
GOLGA6L3
TTLL7
ZFAND3
USPL1
HMGB1
SIRT2
NFKBIB
ZNF77
SS18
RAC3
RUVBL2
MAMSTR
GYS1
SETD5
MPHOSPH8
MYH14
MTMR12
KCNAB2
ANKRD17
FLCN
ZSWIM4
ZNF219
TMEM253
SLC46A3
LMTK2
FAAP24
CEP89
C21orf91
PPP3CA
DAZAP2
ZBTB3
POLR2G
DGCR8
SPATA17
OXR1
GPATCH2
ZNF564
KMT2E
ASH1L
BCAS3
NDUFS7
ANKZF1
RLN1
MZT1
BORA
UQCRH
TMEM260
MAOA
LRRC41
NOCT
ABTB2
LAMP1
CCDC102A
ADGRG5
ARID3C
SHC1
UBALD1
MGRN1
FLAD1
CKS1B
TRAPPC9
RNF6
ANKHD1-EIF4EBP3
ANKHD1
ACTN1
F11R
ZSCAN22
SP1
SRPK2
RITA1
DDX54
NARF
MIA2
DCUN1D4
CYBC1
SPTLC2
PXMP4
MED23
ACAP2
LENG1
DRAP1
C11orf68
ENSA
CALU
JPT2
PTCD2
MRPS27
RAVER1
PABPN1
ICAM3
H4C9
H2BC12
H2AC12
SLX4IP
MKKS
RFX1
YJU2
HIBADH
PRKCZ
YIF1A
UTP18
TMEM151A
MBTD1
MAP1LC3B
FBXO31
NDUFS3
KBTBD4
FRG2
FAM180B
ARPC4-TTLL3
ARPC4
TBL3
RPS2
RNF151
NOXO1
SPSB3
POLR3B
NUBP2
MRPS34
EME2
MIA3
METTL3
TP53I3
SF3B6
FAM228B
G3BP1
CDKN3
AFF1
STRIP1
MYBL2
HACD2
SSBP1
PTPN6
PSPH
CCT6A
C12orf57
MTMR14
ISG20
ENPP5
FASN
PAX8
PRR12
DAB2IP
TNRC6B
TCERG1
PCYOX1L
FAM110A
MCM10
DNM2
CEP164
ZNF48
TBC1D10B
PEX3
MYLPF
ADAT2
USP5
CDCA3
ZDHHC5
SAP30L
CLP1
P4HB
CCNB2
ARHGDIA
KLK6
GTF2H2C_2
GTF2H2C
IL32
ZNF138
NOP53
TSR3
TPST1
SRXN1
SPAG7
GNPTG
ZNF92
TSPAN31
CDK4
AGAP2
BCL9L
TINAGL1
TDRD7
USP3
PTPRH
ZNF212
STK35
GPN2
VAMP2
PER1
MRM3
MAT2A
GLOD4
ATN1
SIPA1L2
NECTIN3
SFXN5
FAM20B
TMEM94
RMI1
PAIP2B
MEIS1
HNRNPK
SPNS1
LAT
GGCT
GATAD2A
PAK4
ACAT2
RECQL
GOLT1B
FARSA
CALR
VDR
TIMM50
SCAND1
RAB5B
PMEL
CDK2
RUVBL1
HEXA
TOMM40
ABHD2
EIF4A1
CD68
C1orf174
RAB1B
PLEKHM3
KLC2
HSP90B1
FCHSD2
PGAP2
NUP98
BUB1B
SRM
CBWD5
WDR70
NUP155
MAN2C1
ZSWIM3
FRMD6
ACOT8
DYNLL1
TMEM183A
MTF2
GTF2H2
TACC1
GOT1
KLF5
FAM126A
ADPGK
RAB28
ACTL6A
PMEPA1
HNRNPAB
EIF2AK3
MRPS15
NAGPA
TPRN
TMEM203
NDOR1
CCDC174
AP3S2
RWDD1
PRKCSH
CCDC151
TATDN3
RBBP6
NSL1
RAB40C
RAB40B
PDE6D
COPS7B
ZNF789
ATP5MF-PTCD1
ATP5MF
ATP5F1E
PPP6R3
CDT1
APRT
ING1
CARS2
MTERF4
LANCL2
STX18
FBXO33
CCDC77
VPS51
TMEM262
LZTS2
H4-16
H2AJ
COA1
CCDC116
CBWD3
FAM227A
CBY1
RPS20
LAPTM4A
ZSCAN25
HBP1
PI4K2A
MORN4
SLC25A38
NUP107
TOP1MT
RHPN1
GOLPH3L
FSIP1
DOK3
DDX41
TMEM248
POLD1
NR1H2
KAT6B
AKT2
ZCCHC4
THRA
PACSIN2
MRPL44
MED24
TOM1L2
PRRG2
NOSIP
DRC3
BCL2L1
ANAPC5
PRR5L
CUL2
COMMD9
SMARCD2
STEAP2
SNX33
IMP3
FAM156A
ATAD3B
TRIAP1
COX6A1
TRAFD1
SLMAP
DPY19L4
PPP2R5A
LY6L
GTF2H3
EIF2B1
CLK3
PSMA7
PRR25
GNG13
STT3A
RBBP5
ZNHIT1
RALY
PLOD3
HMGCR
CDK5RAP1
GRIPAP1
PDIA4
UGP2
SPAG8
RCN2
HINT2
DYRK1B
FAM227B
DTWD1
CCDC200
ZNF273
TMEM199
SIRT4
SEBOX
POLDIP2
SLC24A1
SEC13
EHMT1
ARRDC1
SLC39A4
RBM28
MOGS
CPSF1
UTP23
DIAPH3
COMMD1
CCT4
BZW1
MRPL45
ZFAND2A
TK1
BNIP1
AFMID
ABHD11
UNC45B
RNF5
NLE1
HSPA5
AGPAT1
AGER
AP3M2
ADAMTS9
SDF4
RBBP8NL
MYO19
GGNBP2
B3GALT6
PPP6R1
IER5L
SLC45A4
IMMP1L
ELP4
DOK4
VPS26B
PER2
NUF2
NCAPD3
GLO1
COPZ1
TMEM230
PCNA
NR1H3
LSG1
CDS2
ACP2
ERV3-1-ZNF117
ERV3-1
ZBTB45
SLC27A5