ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: KDM5A | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◣ KDM5A: Average

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MAMDC2
MTRNR2L9
NAGPA
SUMF1
IDH3B
MTRNR2L2
MSH3
EIF2D
SFSWAP
ERAL1
METTL25
CCDC59
PSMB7
TSR3
GNPTG
MTRNR2L8
ATG14
CRBN
UBE3B
KCTD10
TOMM22
SMG8
C8orf33
ZNF830
CCT6B
VPS50
HEPACAM2
GATB
NGDN
URM1
SPNS1
MTRNR2L1
LAT
ISY1-RAB43
ISY1
RRP15
KRR1
VIRMA
TRMT1
NACC1
TMEM199
SEBOX
POLDIP2
MED6
ALKBH3
RPTOR
OAZ3
SAP30BP
RECQL5
SUPT7L
SLC4A1AP
SSNA1
ANAPC2
U2SURP
METTL15
KIF18A
RBM48
PEX1
PDE6D
COPS7B
KAT8
BCKDK
NCAPH2
LMF2
NUP107
NDUFS3
KBTBD4
FAM180B
CWF19L1
TPRN
TMEM203
NDOR1
ZNF165
OR1F12
TAS1R1
NOL9
PPWD1
CENPK
MTBP
MRPL13
TMEM41A
ZC3HC1
GTF3C5
KIF5C
RBM19
TMEM262
TACO1
LOC102724770
DGCR6
DUX4
GET3
EIF3H
MRPL45
POLR3F
DZANK1
SLC39A4
CPSF1
LRRC29
WDR18
MRPL48
CDC23
EIF1AD
CST6
BANF1
BRF2
IPO11
DIMT1
TRIAP1
COX6A1
ZMAT2
HARS2
HARS1
TMEM242
DDX23
FRG2C
MRPL39
ZNRD2
FAM89B
EHBP1L1
HAX1
TSR1
SGSM2
FEM1A
RGS14
LMAN2
RAG2
IFTAP
MRPS15
MOCS3
DPM1
PHAX
ALDH7A1
WDR74
STX5
MTMR2
DBNDD2
ZNF408
ARHGAP1
VAC14
THRA
OPA1
MRPS22
MED24
MRM3
GLOD4
FAM162A
CCDC58
HAGH
FAHD1
VARS2
GTF2H4
NEK2
DNAJC11
REXO4
ADAMTS13
ABT1
ZFPL1
CDCA5
RTTN
MRPS7
MIF4GD
GGA3
NDUFAF2
ERCC8
MAPKAPK5
LAMP1
BBS1
SF3B3
COG4
PACSIN3
DNAJB12
ARFGAP2
CDK5RAP1
ZC3H18
ZFYVE26
RAD51B
SERP1
EIF2A
LONP1
CATSPERD
TIMM21
FBXO15
GPATCH3
COX16
TFPT
PRPF31
TOP3A
SMCR8
PRR5L
COMMD9
NDUFAB1
UNKL
NUP214
C16orf91
SENP1
PFKM
QRICH1
PIH1D2
NKAPD1
SLC35B1
PSMC3
MRPS11
MRPL46
CDKAL1
PMPCA
ENTR1
MRPS35
PLEKHN1
NOC2L
KLHL17
XPO4
WDR70
NUP155
BABAM1
SETD3
CCNK
TIMM22
CSPP1
COPS5
HDAC6
XAB2
STXBP2
PET100
PCP2
NMT1
DCAKD
PHF5A
ACO2
UHMK1
JRK
SREK1IP1
CWC27
MIS18A
TEFM
MRPL55
C1orf35
SLC25A53
FAM199X
SART3
ISCU
TWISTNB
RBX1
TXN2
NOL8
CENPP
DUS2
DPEP2NB
DDX28
NPM3
FGF8
GOLGA3
VPS11
DIABLO
TBC1D23
SPATA25
NEURL2
CTSA
PFDN1
PIGU
ATG9B
ABCB8
SF3B2
GAL3ST3
METTL1
EEF1AKMT3
CYP27B1
PSME3
BECN1
BORCS7
TCTN2
MRPL21
IGHMBP2
SNRPC
UQCC1
SLIRP
ALKBH1
PUS10
PEX13
CENPBD1
WDR53
STMN3
RTEL1
FBXO45
RANBP6
KIAA2026
UBQLN1
FANCD2
MRPL1
GPN2
NDUFB5
MRPL47
NUP160
STX18
NMNAT1
LZIC
TSR2
SLC7A6OS
PRMT7
WASHC2A
SCRN2
OSBPL7
LRRC46
SYF2
TARS2
NOC4L
DDX51
SMG7
STX16
MRPS18C
HELQ
FARS2
TM9SF4
DNAJC30
UTP20
USP30
RGPD2
ZNF585B
ZNF383
WASHC2C
NSFL1C
NUF2
RBM42
TRIP4
RPLP0
PCLAF
GCN1
RTN4IP1
QRSL1
PELP1
ARRB2
EIF3F
GFM1
ZDHHC6
VTI1A
SUPV3L1
TCERG1
TMEM128
NDUFS7
SPTLC1
MKS1
CWC25
SUGCT
MPLKIP
AAAS
COPZ1
EEF1E1
UBL5
MRPL44
FBXL12
DNAJA3
CORO7-PAM16
CORO7
TBL3
RPS2
RNF151
NOXO1
MRPL58
NUDT5
CDC123
KCNJ14
GRWD1
WDR24
STUB1
JMJD8
TBRG4
GOSR1
RNF26
C1QTNF5
REXO1
LSM5
AVL9
SMPD4
MZT2B
FCF1
AREL1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
METTL2A
TXNL4B
DHX38
RPUSD4
FAM118B
BRIX1
PIGL
NCOR1
RCE1
YIPF2
TIMM29
ZFAND2A
DOLPP1
MED1
LARS2
MAGOH
TOMM6
PRICKLE4
MDH1B
FRS3
FASTKD2
TMEM39A
POGLUT1
ERICH4
DMAC2
C5orf51
GSC2
VPS51
TEKT2
ADPRS
DNTTIP2
FAM204A
MALSU1
TRDMT1
TSFM
ATF6
AARSD1
GABARAP
ELP5
CTDNEP1
ZSWIM1
MTRNR2L10
TMED9
B4GALT7
NSA2
GFM2
RAE1
MTRNR2L3
HBS1L
MRTO4
MED4
EMC1
ANAPC5
LIN7C
NDUFB3
FAM126B
LANCL2
MNAT1
ZNF17
TRMT61B
LIN52
ALDH6A1
PGS1
CLPTM1L
TBC1D14
ZNF581
ZNF580
CCDC106
FAM149B1
ECD
NDUFV1
EMILIN2
CCDC43
ZNF514
ZNF2
COMMD2
MFN2
AP1G1
EMC4
SEC13
ZCCHC4
WNK4
VPS25
MUC3A
RFC4
KLHDC4
WDR83OS
WDR83
MAN2B1
MYNN
ACTRT3
TAF11
ANKS1A
ANAPC11
ALYREF
MTIF2
ZSCAN22
HSPBP1
BRSK1
MRPL27
EME1
AURKAIP1
GOSR2
WDR48
SCN11A
CACTIN
RBBP5
SDHC
MPZ
TIMM23B
PARG
RNF166
LTO1
CTU2
SNRPE
NUDCD3
MRPS14
PRR3
GNL1
TROAP
EIF4H
NOP16
HIGD2A
NRDE2
TSN
NCAPH
ITPRIPL1
GTF2H3
EIF2B1
SRPRA
PTPRN2
EXOSC3
FAM98B
UMPS
DARS2
CENPL
UQCC3
UBXN1
TAF3
LBHD1
MYBL2
WWP2
NOB1
TIGD5
EEF1D
TATDN3
NSL1
PPT1
SART1
BMS1
CCDC97
TIMM9
KIAA0586
FAM187A
EFTUD2
CCDC103
FNTB
NDUFC2-KCTD14
NDUFC2
ZNRD1
PPP1R11
SNX19
TIMM17A
LMOD1
VPS52
RPS18
B3GALT4
HDAC4
ERGIC2
C16orf89
BSDC1
ALG1
MZT2A
ZBTB45
SLC27A5
MTERF4
ARFGEF2
TMCO6
NDUFA2
IK
ZKSCAN4
NKAPL
ENDOV
NCBP2AS2
NCBP2
GHITM
THUMPD1
TMEM101
MRPS30
CCDC200
ZNF789
ATP5MF-PTCD1
ATP5MF
IQCH
AAGAB
YJU2
CWF19L2
TAF2
CLPTM1
APOC2
ZMPSTE24
TMCO2
TGFBRAP1
C2orf49
PEX3
NOL11
NAXE
GPATCH4
ADAT2
COMMD4
WDR25
WARS1
POMZP3
DOK3
DDX41
SPG7
OS9
ZNF207
GSTT2B
DDTL
DDT
C17orf75
PEF1
ZNF212
SNRPD3
GUCD1
POLR2J3
NAA25
KDM4D
CWC15
TIMM23
AAR2
FRG2
TMEM126A
PEPD
ATP6V1G1
UBXN11
PIK3R4
KLF1
GCDH
DNASE2
SMN2
SMN1
MRPS23
DDX49
COPE
SLC25A26
RTF2
SLC33A1
MRPL3
KCTD5
BBS10
VPS33A
TMEM258
FEN1
SPSB3
NUBP2
NME3
MRPS34
EME2
NOP53
THBS3
MTX1
CTCF
TSSC4
STK36
SENP5
RNF25
EIF3E
MRPL20
CCNL2
ZBTB6
RC3H2
COIL
ARMC1
EFCAB7
RAD18
ATP5IF1
TAX1BP3
EMC6
ZACN
SRP68
GALR2
INTS1
WDR36
NUP54
ARMC8
VPS13B
SF3A3
ZDHHC16
THAP10
LRRC49
WASHC5
NSMCE2
TMED4
DDX56
OXNAD1
DPH3
UBIAD1
RPS28
NDUFA7
SAMD10
PRPF6
NDUFAF1
UBA5
ACAD11
PHB2
TPGS1
PISD
MTG2
MRPL2
KLC4
CUL7
STARD10
RAD54B
NUP133
CRLF3
ATAD5
ZSCAN25
TBCCD1
DNAJB11
PTCD3
POLR1A
SURF2
SURF1
RPL7A
MED22
COX10
RPS6KB2
PTPRCAP
ZGRF1
VMO1
PSMB6
POLR2J
LARP7
GLTPD2
UTP15
ANKRA2
TARBP2
NPFF
MAP3K12
TRIP13
PGP
MLST8
CASKIN1
BRICD5
BRD9
PEX19
ZBTB8OS
UBOX5
RFXANK
RBBP4
FASTKD5
BORCS8
TJAP1
INTU
SPC25
PWP1
METTL2B
YIPF3
POLR1C
LRRC73
SNRPB2
ECSIT
CNN1
TRMT44
COQ7
ACOX3
FUBP3
RPP30
MAN2C1
FAM207A
SUPT6H
SDF2
TBC1D15
UBE2L3
TMX2
MED19
NOL10
CIAO3
RRNAD1
ISG20L2
EIF4B
COPS8
SRRD
HPS4
DDX21
NBAS
PDHX
NOM1
MLX
COASY
APIP
PSD
FBXL15
PGGT1B
TYW3
PSMB2
GTF3C3
CRYZ
SMU1
VRK1
METTL14
USP16
RWDD2B
RBM8A
PEX11B
OR6B2
NDUFA10
PLEKHM3
NDUFS4
COL23A1
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
PSMD3
LYSMD1
SSBP1
PPIL4
NXT2
VAMP3
ZBTB17
SIRT3
PSMD13
CDK11B
RBM28
ZGPAT
ARFRP1
MRPL4
COA8
BAG5
ZZZ3
UBE2V2
ZNF839
TRUB1
MYL5
PRSS22
OTUB1
MTRNR2L6
BNIP1
SLC24A1
TFIP11
TEPSIN
NDUFAF8
TRIM48
TTC31
TELO2
PTX4
CSTF2
CCDC142
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
LTN1
TRMO
DNAJC19
ZNF23
C16orf95
FAM161B
COQ6
CHEK1
COA6
BUD13
TRAIP
TERF2IP
KARS1
TNPO3
PRPF18
RNF10
MED9
MED23
COQ5
SMC2
TRUB2
COQ4
VPS37A
TRAPPC2L
PABPN1L
GALNS
CNOT7
CMTR1
ZSWIM8
MRPS18A
FUT11
DPP9
CHCHD1
THBS4
SEC16A
MTX3
FAAP20
DDX19A
C9orf163
MTFR1
NUFIP1
GPALPP1
NDUFB8
NDUFAF5
HIF1AN
ESF1
TUFM
SH2B1
GINS1
COP1
CCNT1
MTO1
CGAS
POLR3B
PSPH
DBF4B
CCT6A
AMBRA1
SNRNP35
ZSCAN30
ATP5MG
DHX40
TM7SF3
STOML2
PIGO
MED21
IBA57
KNTC1
XPC
LSM3
MRPS31
MUL1
PSMD4
MED27
CLPB
ING4
NHP2
PTPN21
USP54
OXLD1
CCDC137
ZNF696
AKAP10
TSPAN19
LRRIQ1
LRRC47
SDHAF2
CPSF7
MON2
INO80E
HIRIP3
SSU72
CENPW
TRIM65
STPG3
NELFB
MRPL38
FAM166A
AARS2
SRD5A1
NSUN2
MRPS2
C9orf116
SPRYD4
SEC24C
GPATCH1
SF3B4
PMF1-BGLAP
PMF1
MTMR11
ZNF263
PURB
TONSL
ASH2L
RAB24
PRELID1
MXD3
MRPS28
AQR
ZC3H3
RNASEH2C
MRPL16
KAT5
TFB2M
CNST
ZNF268
TDRD9
ATP5MPL
OSBPL9
HMGCL
BDP1
SPRTN
EXOC8
PNKP
AKT1S1
SLC39A2
RIN1
PCYT1A
METTL17
DHX35
BRMS1
B4GAT1
ZNF721
PIGG
NOP58
SPAG1
POLR2K
NSUN5
CSTF2T
PITX3
GBF1
BRPF1
MAP4K1
EIF3K
ZNF16
FAM214B
PALB2
DCTN5
LAMTOR1
HARBI1
ATG13
ASB6
ANAPC15
RPS14
RBSN
MAP3K7
CFAP298-TCP10L
CFAP298