ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TNFAIP2
SLC6A2
GALNT16
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
GLDN
UBXN10
PLA2G2C
PPP5C
NRSN1
KIAA0319
FBXW2
ZNF837
HOXC4
SEMA5B
GPR68
ZSCAN31
PIH1D1
ALDH16A1
TOMM40L
APOA2
KATNB1
OLFML2B
PRR13
DUX4
DRGX
STRN3
AP4S1
LPIN1
WIZ
SLC17A8
DIABLO
GFRA3
KCNAB2
GNL2
RIMBP2
C6
ITGB5
SMYD3
MTRNR2L2
MSH3
SYBU
ZNF654
CGGBP1
SLC25A25
SRGAP2C
SRGAP2B
WDR74
CMTM4
ABCA12
RMDN3
TBX15
TLE3
C1orf100
CPO
RAPGEF2
BFSP2
C1orf185
P2RX1
NCK1
IGFBP5
TRIO
CHD1
MFSD6
LIMS1
HOXC6
CITED2
LENG9
GRWD1
HES6
GABRA1
VAV3
C14orf180
KCNK16
GDF11
GSX2
ATG9B
ABCB8
TCF4
KBTBD11
SLC12A3
ZBTB45
LRRC15
MTRNR2L8
CENPF
SULT1C4
CHCHD3
TAS2R20
EVI5L
CYTH3
TSHZ2
IFT57
PHLDB1
PHF14
MACROD2
PARVA
SLC7A14
ELAVL4
GGT1
MECOM
ARFIP1
KL
PLEKHS1
ADGRD1
ILF2
KHDC4
ZBTB39
ADCYAP1R1
NPTXR
ZNF488
HAPLN1
PRKD3
USP7
FOXN4
ZZZ3
CRYBG1
COX16
TNFRSF19
GPR83
RSAD2
KDM4B
STON2
COMTD1
FAM163B
EXOSC2
ATF3
DNAJB8
ELOA3D
ELOA3C
ELOA3B
ELOA3
PRKAG2
OPRM1
EEF1AKNMT
C3orf52
VSTM2A
GJA5
IQSEC1
TRIL
PRKAR2B
MAD2L2
TCF20
PPP3CA
EPRS1
MRPS14
TFPT
PRPF31
NTN3
FAM161A
RBKS
LOXL1
BABAM2
PHOX2B
H3C15
H3C14
H2AC19
H2AC18
PDZRN3
CATSPER3
CDH18
CCDC33
PPM1A
PLA2R1
ABAT
TIMM44
PLEKHA5
NRG1
CHRM3
TBX2
NTN4
MFSD12
CHD9
MTRNR2L1
ZNF552
SEMA4B
TMEM60
SGIP1
PHTF2
CHST6
SUGP2
ARMC6
SH3GLB2
DAOA
B3GLCT
SIRT4
USP5
QSER1
IGDCC3
CDCA3
ZNF555
NSD2
TUB
SMAD9
COX7A2L
SPINK5
TMOD1
MRPL28
PRKG1
RARB
DIPK1A
CCNG1
ZNF510
DRD2
PHKB
ITFG1
RHBDD1
USP40
PSMC1
LIMA1
NEMP1
DIXDC1
ANKH
TBCC
BICRAL
VSTM5
GGCT
VPS52
RPS18
MAP1LC3B
FBXO31
SRP14
HTR4
PLXNA1
RAB39A
INTS4
MGAT4C
FDPS
MTA1
RIC8B
KIF26A
GOLGB1
PAFAH1B2
DLX6
RNF4
ZFPM2
TOM1
MAPK13
SLC31A2
RAB11B
CEP152
PCOLCE2
ASNSD1
ASDURF
LYN
AFF3
HOXA6
AOPEP
SLAMF8
PBX3
ZFAND6
RET
ITSN1
ITM2C
CRYZL1
PMVK
FAM219A
DNAI1
SLC17A2
RAPGEF3
ZNF667
PRR25
KCNK15
ACVR1
RGS4
ID4
WNK1
PLAC1
ASF1B
RP1L1
KNL1
SLC18A1
KHSRP
ASB8
ICA1
HEBP2
MPP4
BAMBI
CARS1
BEND4
BCL9L
ANKHD1-EIF4EBP3
ANKHD1
RBM25
APMAP
EFCAB6
MEX3B
TBC1D4
PDCD1
DHRS2
BAHCC1
CALM2
TUBG1
RUFY3
RETREG3
SNAP23
HEXIM2
NRTN
PSMB2
TCERG1
RMDN2
AMMECR1L
GALK1
ZNF350
MN1
SORL1
PWWP3A
SH2D3C
ARID5A
TMEM126B
DLG2
ADGRE5
TPM1
FAM107B
RNF145
MTHFSD
DPH2
ATP6V0B
UHMK1
ADAMTS19
NGDN
CYP8B1
ZNF132
RABGAP1L
LINGO1
NOMO1
SUPT7L
SLC4A1AP
MAP2
FRMD3
SELENBP1
TPGS1
COL21A1
FOCAD
SLC35B4
RBM15
MFSD8
C3orf38
ABHD18
RNF24
PODN
VEPH1
GCSAM
ESRRB
CLASP2
RAB14
GSN
DBH
CTDSP1
RACGAP1
MOV10L1
TIGD6
HMGXB3
SARS1
ULBP3
KCNJ3
PRPF4
CDC26
TTC12
PSENEN
LIN37
TMEM79
SMG5
ALG10B
SNX7
RAB31
GBA
PIGM
MLC1
GP5
DGKB
ASXL2
RBM12
IGFBP3
SYNPO
RPP25
NT5C2
PC
ABT1
ZNHIT3
NFYC
PSMD6
TBC1D2
NME7
CAMK4
BLZF1
MARCKS
ZSWIM4
TUBB1
LSMEM1
KRT19
SORT1
MTA3
KCNG3
CREBL2
FCF1
AREL1
AHCYL1
MRPL27
FOXP1
EME1
CYP51A1
CAND1
TNS1
DCLK3
XAB2
PET100
PCP2
NUMB
COG3
RSBN1
ERCC6L2
VPS51
RASGRP1
TDRD9
ATP5MPL
PTPDC1
MC4R
KCNAB1
THRAP3
CDIPT
FLYWCH2
CHD1L
ANTXR2
AGTR1
TUBB2B
POGZ
BAX
CASQ1
SHC1
FLAD1
CKS1B
PDE3A
FILIP1
ISLR2
ANO6
ZBTB40
PRUNE2
EHD4
CRYGB
AKAP11
CLDN4
SYT15
RPS7
LOC102724488
E4F1
SRPK2
SLC36A4
DACH1
WNT5A
TPCN1
PDE4D
CCDC89
TJP2
SEC22B
AMOT
CAPN10
SH2B2
CERKL
HES1
ARID5B
ZMYND8
TLX3
NOMO3
ZNF608
SKA2
PRR11
NECAP1
AGL
SLC26A7
PXYLP1
NDUFB5
MRPL47
MKKS
FGF14
B3GNT3
UBL4B
TRAF3IP3
PSME3IP1
ARHGEF3
TRUB2
PTBP2
PRRT4
COQ4
ASB6
METTL7A
TFB2M
TFAP2A
CYP19A1
CNST
WAC
UBE2V1
SSRP1
P2RX3
BCAS2
ARL15
TOMM40
STYX
CHST12
TUBA1C
SLC44A3
LSM5
IRF2BPL
CYTH1
AVL9
STARD13
RFT1
GNG12
DAB2IP
RPL27
METTL25
CCDC59
WDR89
PTPRE
PGM2
LARP1
ERMAP
CFAP69
ICE1
TNRC18
LOC283710
LOC100129484
SLC41A2
RIMS2
PCSK6
ZFYVE26
SNX6
RAD51B
NUF2
MYT1
GABRR1
ZNF566
PCDH15
TMCO5A
MYL10
USF1
CSDE1
COPS7A
HERPUD1
B3GNT4
PRSS41
EML4
VLDLR
STRA6
RPS26
INAFM2
CUX2
BLOC1S6
TMEM245
TMBIM6
MDM4
LCN9
HAND2
GNA12
COL5A2
ZNF749
HS3ST5
HAGH
FOXN3
FAHD1
CEP41
ZNRD1
ZNF417
CPN2
THEMIS
STUM
PAXBP1
ALG10
MRTFA
COX7C
ZNF317
SRRD
OSBP2
MAP2K4
INTS5
HPS4
B3GALT2
SULF2
SLC22A8
RPRD2
PTBP1
MIA3
SMAD1
UTP25
EYS
TUFM
SH2B1
PABPN1
SEL1L
SEPTIN11
ZNF331
RFTN1
MRPS33
KCNH2
REX1BD
KRT13
PKD1L1
MLLT3
TRIOBP
TDRKH
RNF224
NEURL1
CYSRT1
TMEM100
RBFOX2
MATR3
HPS3
HNMT
H2BU1
H2AW
DCC
BAZ2A
SERP1
OSBPL6
HDAC9
FBXO34
EIF2A
ATP2B4
ACSS2
ZNF148
TAGAP
SUGT1
PDIA6
CCDC9B
TMEM101
SPSB3
NUBP2
MTRNR2L9
TARS2
G3BP1
TPD52
MRPL34
DDX41
DDA1
TNNT2
POLR3E
LARS1
GRAMD1B
FRG2C
CLDN15
ZIK1
SEMA3C
LOC100289561
HAPLN2
FRG2
C12orf73
WDR46
STAMBP
SP2
SFRP4
SF3B6
PFDN6
P2RY6
FAM228B
EPDR1
ELMO1
DDX49
COPE
ZNF226
TMEM35B
ARL17B
ARL17A
VIPAS39
TCTN3
STK11
RBL2
PRL
H4C3
H1-6
AHSA1
SDR39U1
PALB2
HIC2
GPRC5A
DCTN5
CENPA
ZCCHC8
SHD
SLX4IP
COG7
DMAC1
ZFHX4
PLXNB2
TM9SF4
NOMO2
KDM7A
KCNT2
FAM13B
ANXA2
LUC7L2
FMC1-LUC7L2
FMC1
ETS2
UBE2S
TXNRD1
PHF19
PCBD1
ZBTB2
UBA5
TRMT61B
PACSIN3
GPR107
FZD6
OSBPL9
MSRB2
GNRH1
GLE1
TSNAXIP1
SLC26A2
SDE2
RANBP10
PPP6R1
KCNMB2
AKAP6
ZSCAN32
ZNF227
ZNF174
SELENOW
RNF14
HNRNPL
H2BC6
C15orf62
ARID1A
ABCC5
VPS72
TSPAN8
GAST
WBP4
SNX16
MRPL44
ELF1
CNOT3
CCDC146
CCDC130
BTG2
PPCDC
CARD8
RAD52
FAM98B
DHX16
ZMAT2
YJU2
RBM28
CNOT1
TOMM70
STK11IP
NCS1
MORC3
LNP1
IRF2BP2
BDNF
ZNF225
TECTA
PTGER2
PRKCSH
NBPF15
CCDC151
TBL1X
MAP1B
LBR
FRA10AC1
COA1
YLPM1
SPATC1L
SLC39A9
PRMT5
PRICKLE1
ERH
BCL2L13
ADNP
STT3A
ETFBKMT
TMEM94
PHB2
GPR1
ATF6
ZMYM1
VPS45
JMJD1C
HTR3B
CCDC38
AMDHD1
STX6
RAB27A
PSMD3
MYT1L
CSMD3
ZNF548
TSC1
GFI1B
CBX5
ATP5MF-PTCD1
ATP5MF
TP53BP1
STK32C
RAG1
LRRC27
DPP9
DPP6
BHLHE22
VEZF1
TMEM232
ZNF251
RHOB
MTFP1
OIP5
NUSAP1
ZSWIM3
USP54
CYP20A1
CEP85L
ACOT8
ZNF229
VPS29
RAD9B
MARS1
GLIPR1L1
FREM1
CAPS2
ARHGAP9
RTRAF
PEX12
PES1
OSBPL1A
ATP5MC3
ATP5F1B
TTC31
TMEM69
TMEM231
SETD9
LCT
LCN6
GPBP1L1
CCDC142
ARMH3
RAB30
OAF
MRPS23
EIF3F
ATP5MC2
ANKRD40
ZNF264
NFATC4
MIDEAS
GRIK4
PPP1R12C
TNRC6B
SNX17
EIF2B4
AUH
SUFU
RBP5
MBNL1
CLSTN3
ACTR1A
TOX4
RAB2B
MUC3A
WDR36
TMEM259
RAB11A
MYO18B
DLC1
CNN2
ARNT
SCAF4
NFATC2IP
JARID2
EPHX1
CRYBG3
POLR2J3
PNISR
IPO4
ZNF792
RAB3C
MSTN
MAST4
EIF2B2
DST
NDUFB3
FBXO7
FAM126B
BAZ1B
ZMAT4
SF3B5
SETD1B
PPIL1
MYL6
MED25
LDLRAD4
FUZ
CRYM
CDK12
C6orf89
BANP
PDCL
ID2
H3C13
H2BC18
ZNF484
PTGES2
OTOGL
LITAF
KLHL20
GRASP
FAM243B
FAM243A
APOLD1
SSBP1
SLC37A3
RPS11
RBBP5
MRPL3
ERGIC2
COX20
ASPM
MRPL24
MBIP
ZBTB25
PHB
FKBP3
FANCM
CBFA2T2
LUM
TYRO3
PTH2R
KLF5
DPYSL5
TBRG4
RTN4IP1
QRSL1
CEP120
AP2S1
RASA3
NAA16
KCTD5
U2AF2
RAB5B
NSD3
MRPL54
LNX1
LETM2
APBA3
ANGEL2
ZNF668
ZNF646
SPAG9
ENDOG
C7orf50
WASHC1
TAF5
SREK1IP1
NDUFAF5
ESF1
CWC27
CREM
ZNF304
TRAPPC9
SPRY4
PNKD
HNRNPUL1
CUEDC1
B3GAT1
AAMP
TTR
SLC48A1
RBM48
PEX1
KRR1
GPR85
ZBTB38
WBP11
NAPSA
C12orf60
MYO1B
SOX4
CLDN12
CALM1
TBPL1
GSK3A
C14orf93
SLC2A3
IGFBPL1
DHRS3
CCDC90B
USE1
TTC8
MMACHC
ITM2B
CC2D1B
YARS2
TVP23C
MRTFB
LETMD1